RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 AP1B1Q10567 949 aa19.95■□□□□ 0.78
CAPN1-226ENST00000533820 PABPC1LQ4VXU2 614 aaKnown RBP19.95■□□□□ 0.78
CAPN1-226ENST00000533820 RALGPS1Q5JS13 557 aa19.95■□□□□ 0.78
CAPN1-226ENST00000533820 IRGCQ6NXR0 463 aa19.95■□□□□ 0.78
CAPN1-226ENST00000533820 CLMNQ96JQ2 1002 aa19.95■□□□□ 0.78
CAPN1-226ENST00000533820 ZNF184Q99676 751 aaPredicted RBP19.95■□□□□ 0.78
CAPN1-226ENST00000533820 RNPEPQ9H4A4 650 aa19.95■□□□□ 0.78
CAPN1-226ENST00000533820 ACSS2Q9NR19 701 aa19.95■□□□□ 0.78
CAPN1-226ENST00000533820 TAGLN3Q9UI15 199 aa19.95■□□□□ 0.78
CAPN1-226ENST00000533820 VDRP11473 427 aa19.95■□□□□ 0.78
CAPN1-226ENST00000533820 ANPEPP15144 967 aa19.95■□□□□ 0.78
CAPN1-226ENST00000533820 PROZP22891 400 aa19.95■□□□□ 0.78
CAPN1-226ENST00000533820 CYP2F1P24903 491 aa19.95■□□□□ 0.78
CAPN1-226ENST00000533820 GSTT1P30711 240 aa19.95■□□□□ 0.78
CAPN1-226ENST00000533820 GTF2A2P52657 109 aa19.95■□□□□ 0.78
CAPN1-226ENST00000533820 TEX44Q53QW1 395 aa19.95■□□□□ 0.78
CAPN1-226ENST00000533820 GADL1Q6ZQY3 521 aa19.95■□□□□ 0.78
CAPN1-226ENST00000533820 FZD8Q9H461 694 aa19.95■□□□□ 0.78
CAPN1-226ENST00000533820 XAB2Q9HCS7 855 aaKnown RBP19.95■□□□□ 0.78
CAPN1-226ENST00000533820 ATXN10Q9UBB4 475 aa19.95■□□□□ 0.78
CAPN1-226ENST00000533820 ENDOD1O94919 500 aa19.94■□□□□ 0.78
CAPN1-226ENST00000533820 BPGMP07738 259 aa19.94■□□□□ 0.78
CAPN1-226ENST00000533820 TSHRP16473 764 aa19.94■□□□□ 0.78
CAPN1-226ENST00000533820 PPM1JQ5JR12 505 aa19.94■□□□□ 0.78
CAPN1-226ENST00000533820 KCNT2Q6UVM3 1135 aa19.94■□□□□ 0.78
CAPN1-226ENST00000533820 PPP1R13LQ8WUF5 828 aa19.94■□□□□ 0.78
CAPN1-226ENST00000533820 KLRG1Q96E93 195 aa19.94■□□□□ 0.78
CAPN1-226ENST00000533820 SIGLEC10Q96LC7 697 aa19.94■□□□□ 0.78
CAPN1-226ENST00000533820 C7orf26Q96N11 449 aa19.94■□□□□ 0.78
CAPN1-226ENST00000533820 C2orf40Q9H1Z8 148 aa19.94■□□□□ 0.78
CAPN1-226ENST00000533820 SEPT10Q9P0V9 454 aa19.94■□□□□ 0.78
CAPN1-226ENST00000533820 SIRPGQ9P1W8 387 aa19.94■□□□□ 0.78
CAPN1-226ENST00000533820 PACSIN3Q9UKS6 424 aa19.94■□□□□ 0.78
CAPN1-226ENST00000533820 ABCG1P45844 678 aa19.94■□□□□ 0.78
CAPN1-226ENST00000533820 SLC10A6Q3KNW5 377 aa19.94■□□□□ 0.78
CAPN1-226ENST00000533820 C6orf163Q5TEZ5 329 aa19.94■□□□□ 0.78
CAPN1-226ENST00000533820 ISLR2Q6UXK2 745 aa19.94■□□□□ 0.78
CAPN1-226ENST00000533820 ZNF534Q76KX8 674 aa19.94■□□□□ 0.78
CAPN1-226ENST00000533820 PYROXD2Q8N2H3 581 aa19.94■□□□□ 0.78
CAPN1-226ENST00000533820 PIM2Q9P1W9 311 aa19.94■□□□□ 0.78
CAPN1-226ENST00000533820 AKT3Q9Y243 479 aa19.94■□□□□ 0.78
CAPN1-226ENST00000533820 PFKMP08237 780 aa19.94■□□□□ 0.78
CAPN1-226ENST00000533820 PRKCHP24723 683 aa19.94■□□□□ 0.78
CAPN1-226ENST00000533820 OLIG2Q13516 323 aa19.94■□□□□ 0.78
CAPN1-226ENST00000533820 LBRQ14739 615 aaKnown RBP19.94■□□□□ 0.78
CAPN1-226ENST00000533820 N4BP2L1Q5TBK1 243 aaPredicted RBP19.94■□□□□ 0.78
CAPN1-226ENST00000533820 CHST13Q8NET6 341 aa19.94■□□□□ 0.78
CAPN1-226ENST00000533820 GSDMBQ8TAX9 411 aa19.94■□□□□ 0.78
CAPN1-226ENST00000533820 TRPM4Q8TD43 1214 aa19.94■□□□□ 0.78
CAPN1-226ENST00000533820 C12orf42Q96LP6 360 aa19.94■□□□□ 0.78
CAPN1-226ENST00000533820 LGMNQ99538 433 aa19.94■□□□□ 0.78
CAPN1-226ENST00000533820 EBNA1BP2Q99848 306 aaKnown RBP19.94■□□□□ 0.78
CAPN1-226ENST00000533820 PDGFCQ9NRA1 345 aa19.94■□□□□ 0.78
CAPN1-226ENST00000533820 ZNF358Q9NW07 568 aa19.94■□□□□ 0.78
CAPN1-226ENST00000533820 GGA3Q9NZ52 723 aa19.94■□□□□ 0.78
CAPN1-226ENST00000533820 SNX9Q9Y5X1 595 aa19.94■□□□□ 0.78
CAPN1-226ENST00000533820 PSAT1Q9Y617 370 aa19.94■□□□□ 0.78
CAPN1-226ENST00000533820 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.93■□□□□ 0.78
CAPN1-226ENST00000533820 HNRNPRO43390 633 aaKnown RBP19.93■□□□□ 0.78
CAPN1-226ENST00000533820 GABRB2P47870 512 aa19.93■□□□□ 0.78
CAPN1-226ENST00000533820 OR52E8Q6IFG1 317 aa19.93■□□□□ 0.78
CAPN1-226ENST00000533820 FAM167AQ96KS9 214 aa19.93■□□□□ 0.78
CAPN1-226ENST00000533820 NRDE2Q9H7Z3 1164 aa19.93■□□□□ 0.78
CAPN1-226ENST00000533820 CENPFP49454 3210 aa19.93■□□□□ 0.78
CAPN1-226ENST00000533820 NFKBIEO00221 500 aa19.93■□□□□ 0.78
CAPN1-226ENST00000533820 PPEF2O14830 753 aa19.93■□□□□ 0.78
CAPN1-226ENST00000533820 ETS2P15036 469 aa19.93■□□□□ 0.78
CAPN1-226ENST00000533820 TMEM132DQ14C87 1099 aa19.93■□□□□ 0.78
CAPN1-226ENST00000533820 ZNF778Q96MU6 729 aa19.93■□□□□ 0.78
CAPN1-226ENST00000533820 PNPOQ9NVS9 261 aa19.93■□□□□ 0.78
CAPN1-226ENST00000533820 NDE1Q9NXR1 346 aa19.93■□□□□ 0.78
CAPN1-226ENST00000533820 BARX2Q9UMQ3 279 aaPredicted RBP19.93■□□□□ 0.78
CAPN1-226ENST00000533820 PARP14Q460N5 1801 aa19.93■□□□□ 0.78
CAPN1-226ENST00000533820 KLF11O14901 512 aa19.92■□□□□ 0.78
CAPN1-226ENST00000533820 TM7SF2O76062 418 aa19.92■□□□□ 0.78
CAPN1-226ENST00000533820 HDAC4P56524 1084 aa19.92■□□□□ 0.78
CAPN1-226ENST00000533820 RASIP1Q5U651 963 aa19.92■□□□□ 0.78
CAPN1-226ENST00000533820 TTC30AQ86WT1 665 aa19.92■□□□□ 0.78
CAPN1-226ENST00000533820 SNRNP27Q8WVK2 155 aaKnown RBP19.92■□□□□ 0.78
CAPN1-226ENST00000533820 NDRG1Q92597 394 aaKnown RBP19.92■□□□□ 0.78
CAPN1-226ENST00000533820 MRPL45Q9BRJ2 306 aaKnown RBP19.92■□□□□ 0.78
CAPN1-226ENST00000533820 NT5C1AQ9BXI3 368 aa19.92■□□□□ 0.78
CAPN1-226ENST00000533820 TMPRSS4Q9NRS4 437 aa19.92■□□□□ 0.78
CAPN1-226ENST00000533820 ZNF112Q9UJU3 913 aa19.92■□□□□ 0.78
CAPN1-226ENST00000533820 TPP1O14773 563 aa19.92■□□□□ 0.78
CAPN1-226ENST00000533820 LCP1P13796 627 aa19.92■□□□□ 0.78
CAPN1-226ENST00000533820 NCF2P19878 526 aaPredicted RBP19.92■□□□□ 0.78
CAPN1-226ENST00000533820 PDE1BQ01064 536 aa19.92■□□□□ 0.78
CAPN1-226ENST00000533820 ACAP1Q15027 740 aa19.92■□□□□ 0.78
CAPN1-226ENST00000533820 BOLA3Q53S33 107 aa19.92■□□□□ 0.78
CAPN1-226ENST00000533820 LCA5Q86VQ0 697 aa19.92■□□□□ 0.78
CAPN1-226ENST00000533820 HACE1Q8IYU2 909 aa19.92■□□□□ 0.78
CAPN1-226ENST00000533820 MOCOSQ96EN8 888 aa19.92■□□□□ 0.78
CAPN1-226ENST00000533820 PPP1R36Q96LQ0 422 aa19.92■□□□□ 0.78
CAPN1-226ENST00000533820 CCDC106Q9BWC9 280 aa19.92■□□□□ 0.78
CAPN1-226ENST00000533820 PNPLA8Q9NP80 782 aa19.92■□□□□ 0.78
CAPN1-226ENST00000533820 ZNF212Q9UDV6 495 aa19.92■□□□□ 0.78
CAPN1-226ENST00000533820 PLA2G4CQ9UP65 541 aa19.92■□□□□ 0.78
CAPN1-226ENST00000533820 LCTP09848 1927 aa19.92■□□□□ 0.78
CAPN1-226ENST00000533820 IL18RAPO95256 599 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms