RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 CCDC185Q8N715 623 aa12.37□□□□□ -0.43
COMMD9-208ENST00000533643 TTC16Q8NEE8 873 aa12.37□□□□□ -0.43
COMMD9-208ENST00000533643 PLA2G2FQ9BZM2 168 aa12.37□□□□□ -0.43
COMMD9-208ENST00000533643 DCLK3Q9C098 648 aa12.37□□□□□ -0.43
COMMD9-208ENST00000533643 TKTL2Q9H0I9 626 aa12.37□□□□□ -0.43
COMMD9-208ENST00000533643 ZFP14Q9HCL3 533 aa12.37□□□□□ -0.43
COMMD9-208ENST00000533643 TMPRSS4Q9NRS4 437 aa12.37□□□□□ -0.43
COMMD9-208ENST00000533643 THEGQ9P2T0 379 aa12.37□□□□□ -0.43
COMMD9-208ENST00000533643 XPO7Q9UIA9 1087 aaKnown RBP12.37□□□□□ -0.43
COMMD9-208ENST00000533643 USP18Q9UMW8 372 aa12.37□□□□□ -0.43
COMMD9-208ENST00000533643 FAM50BQ9Y247 325 aa12.37□□□□□ -0.43
COMMD9-208ENST00000533643 NR2E1Q9Y466 385 aa12.37□□□□□ -0.43
COMMD9-208ENST00000533643 E2F8A0AVK6 867 aa12.36□□□□□ -0.43
COMMD9-208ENST00000533643 ANHXE9PGG2 379 aa12.36□□□□□ -0.43
COMMD9-208ENST00000533643 SCAMP3O14828 347 aaKnown RBP12.36□□□□□ -0.43
COMMD9-208ENST00000533643 SPOPO43791 374 aa12.36□□□□□ -0.43
COMMD9-208ENST00000533643 PAGE1O75459 146 aa12.36□□□□□ -0.43
COMMD9-208ENST00000533643 FTCDO95954 541 aa12.36□□□□□ -0.43
COMMD9-208ENST00000533643 MOCS2O96007 188 aaPredicted RBP12.36□□□□□ -0.43
COMMD9-208ENST00000533643 APOEP02649 317 aa12.36□□□□□ -0.43
COMMD9-208ENST00000533643 IL9P15248 144 aa12.36□□□□□ -0.43
COMMD9-208ENST00000533643 SSR1P43307 286 aaKnown RBP12.36□□□□□ -0.43
COMMD9-208ENST00000533643 HTR4Q13639 388 aa12.36□□□□□ -0.43
COMMD9-208ENST00000533643 TXNRD3NBQ6F5E7 133 aa12.36□□□□□ -0.43
COMMD9-208ENST00000533643 VITQ6UXI7 678 aa12.36□□□□□ -0.43
COMMD9-208ENST00000533643 DENND1CQ8IV53 801 aa12.36□□□□□ -0.43
COMMD9-208ENST00000533643 ZDHHC14Q8IZN3 488 aa12.36□□□□□ -0.43
COMMD9-208ENST00000533643 SYCE1Q8N0S2 351 aa12.36□□□□□ -0.43
COMMD9-208ENST00000533643 TDRD5Q8NAT2 981 aaKnown RBP12.36□□□□□ -0.43
COMMD9-208ENST00000533643 FGF14Q92915 247 aa12.36□□□□□ -0.43
COMMD9-208ENST00000533643 CD101Q93033 1021 aa12.36□□□□□ -0.43
COMMD9-208ENST00000533643 AZIN2Q96A70 460 aa12.36□□□□□ -0.43
COMMD9-208ENST00000533643 NTAN1Q96AB6 310 aa12.36□□□□□ -0.43
COMMD9-208ENST00000533643 E2F7Q96AV8 911 aa12.36□□□□□ -0.43
COMMD9-208ENST00000533643 ELSPBP1Q96BH3 223 aa12.36□□□□□ -0.43
COMMD9-208ENST00000533643 RPGRIP1Q96KN7 1286 aa12.36□□□□□ -0.43
COMMD9-208ENST00000533643 BTN2A3PQ96KV6 586 aa12.36□□□□□ -0.43
COMMD9-208ENST00000533643 KXD1Q9BQD3 176 aa12.36□□□□□ -0.43
COMMD9-208ENST00000533643 MAGEB5Q9BZ81 275 aa12.36□□□□□ -0.43
COMMD9-208ENST00000533643 ZWILCHQ9H900 591 aa12.36□□□□□ -0.43
COMMD9-208ENST00000533643 GPATCH2LQ9NWQ4 482 aa12.36□□□□□ -0.43
COMMD9-208ENST00000533643 OBP2AQ9NY56 170 aa12.36□□□□□ -0.43
COMMD9-208ENST00000533643 LIMD1Q9UGP4 676 aa12.36□□□□□ -0.43
COMMD9-208ENST00000533643 SLC12A6Q9UHW9 1150 aa12.36□□□□□ -0.43
COMMD9-208ENST00000533643 LSM7Q9UK45 103 aaKnown RBP12.36□□□□□ -0.43
COMMD9-208ENST00000533643 AGO1Q9UL18 857 aaKnown RBP12.36□□□□□ -0.43
COMMD9-208ENST00000533643 FZD10Q9ULW2 581 aa12.36□□□□□ -0.43
COMMD9-208ENST00000533643 SH3BP1Q9Y3L3 701 aa12.36□□□□□ -0.43
COMMD9-208ENST00000533643 COL6A3P12111 3177 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 DOCK8Q8NF50 2099 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 ACSL4O60488 711 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 ECI2O75521 394 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 LATS1O95835 1130 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 RARAP10276 462 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 TNNT1P13805 278 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 SLC11A2P49281 568 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 AIF1P55008 147 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 SCAPQ12770 1279 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 CA9Q16790 459 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 HADHQ16836 314 aaKnown RBP12.35□□□□□ -0.43
COMMD9-208ENST00000533643 AAK1Q2M2I8 961 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 ARL13BQ3SXY8 428 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 ATP13A4Q4VNC1 1196 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 BOLA3Q53S33 107 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 ERMARDQ5T6L9 678 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 PIK3R6Q5UE93 754 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 LRRC38Q5VT99 294 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 NADSYN1Q6IA69 706 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 MTSS1LQ765P7 747 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 PEX26Q7Z412 305 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 NT5DC3Q86UY8 548 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 MFSD6LQ8IWD5 586 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 BBS7Q8IWZ6 715 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 PLCD3Q8N3E9 789 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 KIAA1958Q8N8K9 716 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 ATP6V0D2Q8N8Y2 350 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 TRIM58Q8NG06 486 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 TEKT4Q8WW24 435 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 ALS2CR12Q96Q35 445 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 HAPLN3Q96S86 360 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 RPP25Q9BUL9 199 aaKnown RBP12.35□□□□□ -0.43
COMMD9-208ENST00000533643 SNRNP25Q9BV90 132 aaKnown RBP12.35□□□□□ -0.43
COMMD9-208ENST00000533643 OSBPL2Q9H1P3 480 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 AMFRQ9UKV5 643 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 ZNF510Q9Y2H8 683 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 SNX10Q9Y5X0 201 aa12.35□□□□□ -0.43
COMMD9-208ENST00000533643 GOLGA6L7A0A1B0GV03 622 aa12.34□□□□□ -0.43
COMMD9-208ENST00000533643 LOC730098B7Z3J9 87 aa12.34□□□□□ -0.43
COMMD9-208ENST00000533643 FAM72CH0Y354 149 aa12.34□□□□□ -0.43
COMMD9-208ENST00000533643 KIF5CO60282 957 aa12.34□□□□□ -0.43
COMMD9-208ENST00000533643 GJC1P36383 396 aa12.34□□□□□ -0.43
COMMD9-208ENST00000533643 MARCKSL1P49006 195 aa12.34□□□□□ -0.43
COMMD9-208ENST00000533643 MLLT6P55198 1093 aaPredicted RBP12.34□□□□□ -0.43
COMMD9-208ENST00000533643 MTA1Q13330 715 aa12.34□□□□□ -0.43
COMMD9-208ENST00000533643 SMTNL2Q2TAL5 461 aa12.34□□□□□ -0.43
COMMD9-208ENST00000533643 FAM133BQ5BKY9 247 aaKnown RBP12.34□□□□□ -0.43
COMMD9-208ENST00000533643 MS4A13Q5J8X5 152 aa12.34□□□□□ -0.43
COMMD9-208ENST00000533643 EFHC2Q5JST6 749 aa12.34□□□□□ -0.43
COMMD9-208ENST00000533643 KCNT1Q5JUK3 1230 aa12.34□□□□□ -0.43
COMMD9-208ENST00000533643 ZNF569Q5MCW4 686 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms