RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 CCDC172P0C7W6 258 aa21.26■□□□□ 0.99
CCS-208ENST00000533244 HOXA6P31267 233 aa21.26■□□□□ 0.99
CCS-208ENST00000533244 NOS2P35228 1153 aa21.26■□□□□ 0.99
CCS-208ENST00000533244 MATKP42679 507 aa21.26■□□□□ 0.99
CCS-208ENST00000533244 SLC11A2P49281 568 aa21.26■□□□□ 0.99
CCS-208ENST00000533244 MRPS21P82921 87 aaKnown RBP21.26■□□□□ 0.99
CCS-208ENST00000533244 CDK17Q00537 523 aa21.26■□□□□ 0.99
CCS-208ENST00000533244 PTP4A2Q12974 167 aa21.26■□□□□ 0.99
CCS-208ENST00000533244 CLEC16AQ2KHT3 1053 aa21.26■□□□□ 0.99
CCS-208ENST00000533244 MPPE1Q53F39 396 aa21.26■□□□□ 0.99
CCS-208ENST00000533244 C2CD6Q53TS8 623 aa21.26■□□□□ 0.99
CCS-208ENST00000533244 OTUD1Q5VV17 481 aaPredicted RBP21.26■□□□□ 0.99
CCS-208ENST00000533244 NADSYN1Q6IA69 706 aa21.26■□□□□ 0.99
CCS-208ENST00000533244 ZBTB44Q8NCP5 570 aa21.26■□□□□ 0.99
CCS-208ENST00000533244 BHMTQ93088 406 aa21.26■□□□□ 0.99
CCS-208ENST00000533244 NT5C3BQ969T7 300 aa21.26■□□□□ 0.99
CCS-208ENST00000533244 ACDQ96AP0 544 aa21.26■□□□□ 0.99
CCS-208ENST00000533244 AGPAT1Q99943 283 aa21.26■□□□□ 0.99
CCS-208ENST00000533244 RRN3Q9NYV6 651 aa21.26■□□□□ 0.99
CCS-208ENST00000533244 SLC27A6Q9Y2P4 619 aa21.26■□□□□ 0.99
CCS-208ENST00000533244 VPS13AQ96RL7 3174 aa21.25■□□□□ 0.99
CCS-208ENST00000533244 HOXD9P28356 352 aaPredicted RBP21.25■□□□□ 0.99
CCS-208ENST00000533244 DGKGP49619 791 aa21.25■□□□□ 0.99
CCS-208ENST00000533244 GSCP56915 257 aaPredicted RBP21.25■□□□□ 0.99
CCS-208ENST00000533244 FAM102AQ5T9C2 384 aaPredicted RBP21.25■□□□□ 0.99
CCS-208ENST00000533244 E4F1Q66K89 784 aaPredicted RBP21.25■□□□□ 0.99
CCS-208ENST00000533244 SYT13Q7L8C5 426 aa21.25■□□□□ 0.99
CCS-208ENST00000533244 ARCQ7LC44 396 aa21.25■□□□□ 0.99
CCS-208ENST00000533244 NPY6RQ99463 290 aa21.25■□□□□ 0.99
CCS-208ENST00000533244 ZSCAN32Q9NX65 697 aa21.25■□□□□ 0.99
CCS-208ENST00000533244 AIPL1Q9NZN9 384 aa21.25■□□□□ 0.99
CCS-208ENST00000533244 IFNKQ9P0W0 207 aa21.25■□□□□ 0.99
CCS-208ENST00000533244 TMEM59LQ9UK28 342 aa21.25■□□□□ 0.99
CCS-208ENST00000533244 STARD13Q9Y3M8 1113 aa21.25■□□□□ 0.99
CCS-208ENST00000533244 PIEZO1Q92508 2521 aa21.25■□□□□ 0.99
CCS-208ENST00000533244 FAM170AA1A519 330 aa21.24■□□□□ 0.99
CCS-208ENST00000533244 SLC6A4P31645 630 aa21.24■□□□□ 0.99
CCS-208ENST00000533244 SEC13P55735 322 aa21.24■□□□□ 0.99
CCS-208ENST00000533244 HSF5Q4G112 596 aaPredicted RBP21.24■□□□□ 0.99
CCS-208ENST00000533244 ZC3H12AQ5D1E8 599 aaKnown RBP21.24■□□□□ 0.99
CCS-208ENST00000533244 PIK3R6Q5UE93 754 aa21.24■□□□□ 0.99
CCS-208ENST00000533244 MMS22LQ6ZRQ5 1243 aa21.24■□□□□ 0.99
CCS-208ENST00000533244 PHF13Q86YI8 300 aaPredicted RBP21.24■□□□□ 0.99
CCS-208ENST00000533244 SLC30A5Q8TAD4 765 aa21.24■□□□□ 0.99
CCS-208ENST00000533244 KCNV2Q8TDN2 545 aa21.24■□□□□ 0.99
CCS-208ENST00000533244 DDI1Q8WTU0 396 aa21.24■□□□□ 0.99
CCS-208ENST00000533244 PGAP3Q96FM1 320 aaPredicted RBP21.24■□□□□ 0.99
CCS-208ENST00000533244 NUP58Q9BVL2 599 aa21.24■□□□□ 0.99
CCS-208ENST00000533244 SLC2A11Q9BYW1 496 aa21.24■□□□□ 0.99
CCS-208ENST00000533244 ADAM33Q9BZ11 813 aa21.24■□□□□ 0.99
CCS-208ENST00000533244 FAM204AQ9H8W3 233 aa21.24■□□□□ 0.99
CCS-208ENST00000533244 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.24■□□□□ 0.99
CCS-208ENST00000533244 DDIT4Q9NX09 232 aa21.24■□□□□ 0.99
CCS-208ENST00000533244 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.24■□□□□ 0.99
CCS-208ENST00000533244 CALCOCO1Q9P1Z2 691 aa21.24■□□□□ 0.99
CCS-208ENST00000533244 HCN2Q9UL51 889 aa21.24■□□□□ 0.99
CCS-208ENST00000533244 CLEC4EQ9ULY5 219 aa21.24■□□□□ 0.99
CCS-208ENST00000533244 PCDHGA2Q9Y5H1 932 aa21.24■□□□□ 0.99
CCS-208ENST00000533244 GOLGA6L7A0A1B0GV03 622 aa21.23■□□□□ 0.99
CCS-208ENST00000533244 A0A1W2PQJ5 194 aa21.23■□□□□ 0.99
CCS-208ENST00000533244 TBC1D3BA6NDS4 549 aa21.23■□□□□ 0.99
CCS-208ENST00000533244 KCNU1A8MYU2 1149 aa21.23■□□□□ 0.99
CCS-208ENST00000533244 LILRB5O75023 590 aa21.23■□□□□ 0.99
CCS-208ENST00000533244 APOEP02649 317 aa21.23■□□□□ 0.99
CCS-208ENST00000533244 GBP1P32455 592 aa21.23■□□□□ 0.99
CCS-208ENST00000533244 PRKCIP41743 596 aa21.23■□□□□ 0.99
CCS-208ENST00000533244 SGSHP51688 502 aa21.23■□□□□ 0.99
CCS-208ENST00000533244 C2orf27AQ580R0 203 aa21.23■□□□□ 0.99
CCS-208ENST00000533244 C10orf76Q5T2E6 689 aa21.23■□□□□ 0.99
CCS-208ENST00000533244 MPP7Q5T2T1 576 aa21.23■□□□□ 0.99
CCS-208ENST00000533244 TRNP1Q6NT89 227 aa21.23■□□□□ 0.99
CCS-208ENST00000533244 ZC3H14Q6PJT7 736 aaKnown RBP21.23■□□□□ 0.99
CCS-208ENST00000533244 NUDT18Q6ZVK8 323 aa21.23■□□□□ 0.99
CCS-208ENST00000533244 IL17RCQ8NAC3 791 aa21.23■□□□□ 0.99
CCS-208ENST00000533244 BTN2A3PQ96KV6 586 aa21.23■□□□□ 0.99
CCS-208ENST00000533244 C11orf70Q9BRQ4 267 aa21.23■□□□□ 0.99
CCS-208ENST00000533244 POLR3BQ9NW08 1133 aaPredicted RBP21.23■□□□□ 0.99
CCS-208ENST00000533244 XPO7Q9UIA9 1087 aaKnown RBP21.23■□□□□ 0.99
CCS-208ENST00000533244 MMP17Q9ULZ9 603 aa21.23■□□□□ 0.99
CCS-208ENST00000533244 R4GN57 208 aa21.23■□□□□ 0.99
CCS-208ENST00000533244 PRRT4C9JH25 899 aa21.22■□□□□ 0.99
CCS-208ENST00000533244 TSPAN3O60637 253 aa21.22■□□□□ 0.99
CCS-208ENST00000533244 HOXC13P31276 330 aa21.22■□□□□ 0.99
CCS-208ENST00000533244 FLT3P36888 993 aa21.22■□□□□ 0.99
CCS-208ENST00000533244 NSFP46459 744 aaKnown RBP21.22■□□□□ 0.99
CCS-208ENST00000533244 NRLP54845 237 aa21.22■□□□□ 0.99
CCS-208ENST00000533244 DMC1Q14565 340 aa21.22■□□□□ 0.99
CCS-208ENST00000533244 ASIC2Q16515 512 aa21.22■□□□□ 0.99
CCS-208ENST00000533244 EMC10Q5UCC4 262 aa21.22■□□□□ 0.99
CCS-208ENST00000533244 RFWD3Q6PCD5 774 aa21.22■□□□□ 0.99
CCS-208ENST00000533244 MON1BQ7L1V2 547 aa21.22■□□□□ 0.99
CCS-208ENST00000533244 BNIPLQ7Z465 357 aa21.22■□□□□ 0.99
CCS-208ENST00000533244 TMA16Q96EY4 203 aaKnown RBP21.22■□□□□ 0.99
CCS-208ENST00000533244 PRICKLE1Q96MT3 831 aaPredicted RBP21.22■□□□□ 0.99
CCS-208ENST00000533244 DDX50Q9BQ39 737 aaKnown RBP21.22■□□□□ 0.99
CCS-208ENST00000533244 NUCKS1Q9H1E3 243 aaKnown RBP21.22■□□□□ 0.99
CCS-208ENST00000533244 STAP1Q9ULZ2 295 aa21.22■□□□□ 0.99
CCS-208ENST00000533244 GOLGA8SH3BPF8 625 aa21.21■□□□□ 0.99
CCS-208ENST00000533244 MOCS2O96007 188 aaPredicted RBP21.21■□□□□ 0.99
CCS-208ENST00000533244 SLC2A3P11169 496 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms