RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 TFDP3Q5H9I0 405 aa19.19■□□□□ 0.66
SMPD1-208ENST00000533123 STRADAQ7RTN6 431 aa19.19■□□□□ 0.66
SMPD1-208ENST00000533123 ELMOD1Q8N336 334 aa19.19■□□□□ 0.66
SMPD1-208ENST00000533123 DQX1Q8TE96 717 aaKnown RBP19.19■□□□□ 0.66
SMPD1-208ENST00000533123 CASP10Q92851 521 aa19.19■□□□□ 0.66
SMPD1-208ENST00000533123 CCSER2Q9H7U1 834 aa19.19■□□□□ 0.66
SMPD1-208ENST00000533123 DDIT4Q9NX09 232 aa19.19■□□□□ 0.66
SMPD1-208ENST00000533123 CLIC5Q9NZA1 410 aa19.19■□□□□ 0.66
SMPD1-208ENST00000533123 RASAL2Q9UJF2 1139 aa19.19■□□□□ 0.66
SMPD1-208ENST00000533123 ZNF840PA6NDX5 716 aa19.19■□□□□ 0.66
SMPD1-208ENST00000533123 ECEL1O95672 775 aa19.19■□□□□ 0.66
SMPD1-208ENST00000533123 CETN2P41208 172 aa19.19■□□□□ 0.66
SMPD1-208ENST00000533123 BNIPLQ7Z465 357 aa19.19■□□□□ 0.66
SMPD1-208ENST00000533123 TMEM150AQ86TG1 271 aa19.19■□□□□ 0.66
SMPD1-208ENST00000533123 TAC4Q86UU9 113 aa19.19■□□□□ 0.66
SMPD1-208ENST00000533123 PDZD8Q8NEN9 1154 aa19.19■□□□□ 0.66
SMPD1-208ENST00000533123 VN1R2Q8NFZ6 395 aa19.19■□□□□ 0.66
SMPD1-208ENST00000533123 HAUS1Q96CS2 278 aa19.19■□□□□ 0.66
SMPD1-208ENST00000533123 CORO1BQ9BR76 489 aa19.19■□□□□ 0.66
SMPD1-208ENST00000533123 FAM204AQ9H8W3 233 aa19.19■□□□□ 0.66
SMPD1-208ENST00000533123 PIGVQ9NUD9 493 aa19.19■□□□□ 0.66
SMPD1-208ENST00000533123 HCFC1R1Q9NWW0 138 aa19.19■□□□□ 0.66
SMPD1-208ENST00000533123 TRPM5Q9NZQ8 1165 aa19.19■□□□□ 0.66
SMPD1-208ENST00000533123 C5orf42Q9H799 3197 aa19.18■□□□□ 0.66
SMPD1-208ENST00000533123 KDELR1P24390 212 aa19.18■□□□□ 0.66
SMPD1-208ENST00000533123 COPS2P61201 443 aa19.18■□□□□ 0.66
SMPD1-208ENST00000533123 DEUP1Q05D60 604 aa19.18■□□□□ 0.66
SMPD1-208ENST00000533123 FAM131BQ86XD5 332 aa19.18■□□□□ 0.66
SMPD1-208ENST00000533123 OVCA2Q8WZ82 227 aa19.18■□□□□ 0.66
SMPD1-208ENST00000533123 LRRC3Q9BY71 257 aa19.18■□□□□ 0.66
SMPD1-208ENST00000533123 IL21Q9HBE4 155 aa19.18■□□□□ 0.66
SMPD1-208ENST00000533123 FAM114A2Q9NRY5 505 aa19.18■□□□□ 0.66
SMPD1-208ENST00000533123 RRN3Q9NYV6 651 aa19.18■□□□□ 0.66
SMPD1-208ENST00000533123 UXTQ9UBK9 157 aaPredicted RBP19.18■□□□□ 0.66
SMPD1-208ENST00000533123 DPP7Q9UHL4 492 aa19.18■□□□□ 0.66
SMPD1-208ENST00000533123 H3BQF6 201 aa19.17■□□□□ 0.66
SMPD1-208ENST00000533123 MDM4O15151 490 aa19.17■□□□□ 0.66
SMPD1-208ENST00000533123 TLR5O60602 858 aa19.17■□□□□ 0.66
SMPD1-208ENST00000533123 ENDOD1O94919 500 aa19.17■□□□□ 0.66
SMPD1-208ENST00000533123 TJP3O95049 919 aa19.17■□□□□ 0.66
SMPD1-208ENST00000533123 PTPN7P35236 360 aa19.17■□□□□ 0.66
SMPD1-208ENST00000533123 RPL21P46778 160 aaKnown RBP19.17■□□□□ 0.66
SMPD1-208ENST00000533123 DYNLT1P63172 113 aa19.17■□□□□ 0.66
SMPD1-208ENST00000533123 GRIN2CQ14957 1233 aa19.17■□□□□ 0.66
SMPD1-208ENST00000533123 RTL10Q7L3V2 364 aa19.17■□□□□ 0.66
SMPD1-208ENST00000533123 EIF1ADQ8N9N8 165 aaKnown RBP19.17■□□□□ 0.66
SMPD1-208ENST00000533123 KCTD6Q8NC69 237 aa19.17■□□□□ 0.66
SMPD1-208ENST00000533123 PPP2R3CQ969Q6 453 aa19.17■□□□□ 0.66
SMPD1-208ENST00000533123 CCDC114Q96M63 670 aa19.17■□□□□ 0.66
SMPD1-208ENST00000533123 RUNDC3BQ96NL0 473 aa19.17■□□□□ 0.66
SMPD1-208ENST00000533123 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.17■□□□□ 0.66
SMPD1-208ENST00000533123 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.17■□□□□ 0.66
SMPD1-208ENST00000533123 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.17■□□□□ 0.66
SMPD1-208ENST00000533123 CCDC195A0A1B0GUA6 201 aa19.17■□□□□ 0.66
SMPD1-208ENST00000533123 SOX1O00570 391 aaPredicted RBP19.17■□□□□ 0.66
SMPD1-208ENST00000533123 MSI1O43347 362 aaKnown RBP19.17■□□□□ 0.66
SMPD1-208ENST00000533123 PRPSAP2O60256 369 aa19.17■□□□□ 0.66
SMPD1-208ENST00000533123 F11P03951 625 aa19.17■□□□□ 0.66
SMPD1-208ENST00000533123 GABRR2P28476 465 aa19.17■□□□□ 0.66
SMPD1-208ENST00000533123 RDXP35241 583 aaKnown RBP19.17■□□□□ 0.66
SMPD1-208ENST00000533123 EFEMP1Q12805 493 aa19.17■□□□□ 0.66
SMPD1-208ENST00000533123 NNTQ13423 1086 aa19.17■□□□□ 0.66
SMPD1-208ENST00000533123 KCNC3Q14003 757 aa19.17■□□□□ 0.66
SMPD1-208ENST00000533123 PPP1R7Q15435 360 aa19.17■□□□□ 0.66
SMPD1-208ENST00000533123 CCNG2Q16589 344 aa19.17■□□□□ 0.66
SMPD1-208ENST00000533123 TCEAL5Q5H9L2 206 aa19.17■□□□□ 0.66
SMPD1-208ENST00000533123 C10orf120Q5SQS8 335 aa19.17■□□□□ 0.66
SMPD1-208ENST00000533123 TMC8Q8IU68 726 aa19.17■□□□□ 0.66
SMPD1-208ENST00000533123 C12orf76Q8N812 135 aaPredicted RBP19.17■□□□□ 0.66
SMPD1-208ENST00000533123 CMASQ8NFW8 434 aaPredicted RBP19.17■□□□□ 0.66
SMPD1-208ENST00000533123 SLCO2A1Q92959 643 aa19.17■□□□□ 0.66
SMPD1-208ENST00000533123 SMOC2Q9H3U7 446 aa19.17■□□□□ 0.66
SMPD1-208ENST00000533123 NSUN3Q9H649 340 aaKnown RBP19.17■□□□□ 0.66
SMPD1-208ENST00000533123 VIPAS39Q9H9C1 493 aa19.17■□□□□ 0.66
SMPD1-208ENST00000533123 GRHL1Q9NZI5 618 aa19.17■□□□□ 0.66
SMPD1-208ENST00000533123 HOXA9P31269 272 aa19.16■□□□□ 0.66
SMPD1-208ENST00000533123 TRIP13Q15645 432 aaPredicted RBP19.16■□□□□ 0.66
SMPD1-208ENST00000533123 SNX30Q5VWJ9 437 aa19.16■□□□□ 0.66
SMPD1-208ENST00000533123 GAREM2Q75VX8 874 aa19.16■□□□□ 0.66
SMPD1-208ENST00000533123 PGAP3Q96FM1 320 aaPredicted RBP19.16■□□□□ 0.66
SMPD1-208ENST00000533123 WDR6Q9NNW5 1121 aaKnown RBP19.16■□□□□ 0.66
SMPD1-208ENST00000533123 GPATCH2LQ9NWQ4 482 aa19.16■□□□□ 0.66
SMPD1-208ENST00000533123 IGLV3-25P01717 112 aa19.16■□□□□ 0.66
SMPD1-208ENST00000533123 MYL4P12829 197 aa19.16■□□□□ 0.66
SMPD1-208ENST00000533123 HYAL1Q12794 435 aa19.16■□□□□ 0.66
SMPD1-208ENST00000533123 ZDHHC24Q6UX98 284 aa19.16■□□□□ 0.66
SMPD1-208ENST00000533123 MIB1Q86YT6 1006 aa19.16■□□□□ 0.66
SMPD1-208ENST00000533123 CDCA3Q99618 268 aaPredicted RBP19.16■□□□□ 0.66
SMPD1-208ENST00000533123 CALN1Q9BXU9 219 aa19.16■□□□□ 0.66
SMPD1-208ENST00000533123 ASAH2Q9NR71 780 aa19.16■□□□□ 0.66
SMPD1-208ENST00000533123 ZDHHC18Q9NUE0 388 aa19.16■□□□□ 0.66
SMPD1-208ENST00000533123 ZDHHC7Q9NXF8 308 aa19.16■□□□□ 0.66
SMPD1-208ENST00000533123 DNMT3BQ9UBC3 853 aaKnown RBP19.16■□□□□ 0.66
SMPD1-208ENST00000533123 SAE1Q9UBE0 346 aaPredicted RBP19.16■□□□□ 0.66
SMPD1-208ENST00000533123 DNPEPQ9ULA0 475 aa19.16■□□□□ 0.66
SMPD1-208ENST00000533123 C2orf78A6NCI8 922 aa19.15■□□□□ 0.66
SMPD1-208ENST00000533123 NRG2O14511 850 aaPredicted RBP19.15■□□□□ 0.66
SMPD1-208ENST00000533123 LIASO43766 372 aa19.15■□□□□ 0.66
SMPD1-208ENST00000533123 HNRNPA1P09651 372 aaKnown RBP eCLIP19.15■□□□□ 0.66
SMPD1-208ENST00000533123 GJA1P17302 382 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms