RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 PCSK1NQ9UHG2 260 aa14.86□□□□□ -0.03
COL16A1-217ENST00000532877 ZMYM5Q9UJ78 669 aa14.86□□□□□ -0.03
COL16A1-217ENST00000532877 AMFRQ9UKV5 643 aa14.86□□□□□ -0.03
COL16A1-217ENST00000532877 PACSIN2Q9UNF0 486 aaPredicted RBP14.86□□□□□ -0.03
COL16A1-217ENST00000532877 CPQQ9Y646 472 aa14.86□□□□□ -0.03
COL16A1-217ENST00000532877 FANCGO15287 622 aa14.85□□□□□ -0.03
COL16A1-217ENST00000532877 PSTPIP1O43586 416 aa14.85□□□□□ -0.03
COL16A1-217ENST00000532877 PRAMEF12O95522 483 aa14.85□□□□□ -0.03
COL16A1-217ENST00000532877 HMBSP08397 361 aa14.85□□□□□ -0.03
COL16A1-217ENST00000532877 TNNT1P13805 278 aa14.85□□□□□ -0.03
COL16A1-217ENST00000532877 CCR1P32246 355 aa14.85□□□□□ -0.03
COL16A1-217ENST00000532877 CTNNA1P35221 906 aaKnown RBP14.85□□□□□ -0.03
COL16A1-217ENST00000532877 GJC1P36383 396 aa14.85□□□□□ -0.03
COL16A1-217ENST00000532877 AVPR1AP37288 418 aa14.85□□□□□ -0.03
COL16A1-217ENST00000532877 MARCKSL1P49006 195 aa14.85□□□□□ -0.03
COL16A1-217ENST00000532877 KPNA1P52294 538 aaPredicted RBP14.85□□□□□ -0.03
COL16A1-217ENST00000532877 ETF1P62495 437 aaKnown RBP14.85□□□□□ -0.03
COL16A1-217ENST00000532877 COG7P83436 770 aa14.85□□□□□ -0.03
COL16A1-217ENST00000532877 RING1Q06587 406 aa14.85□□□□□ -0.03
COL16A1-217ENST00000532877 PPP2R5DQ14738 602 aa14.85□□□□□ -0.03
COL16A1-217ENST00000532877 CBX2Q14781 532 aaPredicted RBP14.85□□□□□ -0.03
COL16A1-217ENST00000532877 HADHQ16836 314 aaKnown RBP14.85□□□□□ -0.03
COL16A1-217ENST00000532877 SMTNL2Q2TAL5 461 aa14.85□□□□□ -0.03
COL16A1-217ENST00000532877 ZC3H12AQ5D1E8 599 aaKnown RBP14.85□□□□□ -0.03
COL16A1-217ENST00000532877 BRMS1LQ5PSV4 323 aa14.85□□□□□ -0.03
COL16A1-217ENST00000532877 LRRC38Q5VT99 294 aa14.85□□□□□ -0.03
COL16A1-217ENST00000532877 TXNRD3NBQ6F5E7 133 aa14.85□□□□□ -0.03
COL16A1-217ENST00000532877 RHOT1Q8IXI2 618 aa14.85□□□□□ -0.03
COL16A1-217ENST00000532877 SUSD6Q92537 303 aa14.85□□□□□ -0.03
COL16A1-217ENST00000532877 KRT35Q92764 455 aa14.85□□□□□ -0.03
COL16A1-217ENST00000532877 FGF13Q92913 245 aa14.85□□□□□ -0.03
COL16A1-217ENST00000532877 RNF34Q969K3 372 aa14.85□□□□□ -0.03
COL16A1-217ENST00000532877 PLD4Q96BZ4 506 aa14.85□□□□□ -0.03
COL16A1-217ENST00000532877 HES6Q96HZ4 224 aa14.85□□□□□ -0.03
COL16A1-217ENST00000532877 ZSWIM3Q96MP5 696 aa14.85□□□□□ -0.03
COL16A1-217ENST00000532877 SMG9Q9H0W8 520 aaKnown RBP14.85□□□□□ -0.03
COL16A1-217ENST00000532877 POMKQ9H5K3 350 aa14.85□□□□□ -0.03
COL16A1-217ENST00000532877 WDCPQ9H6R7 721 aa14.85□□□□□ -0.03
COL16A1-217ENST00000532877 ZWILCHQ9H900 591 aa14.85□□□□□ -0.03
COL16A1-217ENST00000532877 ANLNQ9NQW6 1124 aa14.85□□□□□ -0.03
COL16A1-217ENST00000532877 TMEM51Q9NW97 253 aa14.85□□□□□ -0.03
COL16A1-217ENST00000532877 PRKAG3Q9UGI9 489 aa14.85□□□□□ -0.03
COL16A1-217ENST00000532877 ARHGAP26Q9UNA1 814 aa14.85□□□□□ -0.03
COL16A1-217ENST00000532877 JRKLQ9Y4A0 524 aa14.85□□□□□ -0.03
COL16A1-217ENST00000532877 USP15Q9Y4E8 981 aaPredicted RBP14.85□□□□□ -0.03
COL16A1-217ENST00000532877 MIF4GDA9UHW6 222 aaKnown RBP14.84□□□□□ -0.03
COL16A1-217ENST00000532877 I6L893 689 aaPredicted RBP14.84□□□□□ -0.03
COL16A1-217ENST00000532877 STC2O76061 302 aa14.84□□□□□ -0.03
COL16A1-217ENST00000532877 APOEP02649 317 aa14.84□□□□□ -0.03
COL16A1-217ENST00000532877 KRT7P08729 469 aa14.84□□□□□ -0.03
COL16A1-217ENST00000532877 IRF1P10914 325 aa14.84□□□□□ -0.03
COL16A1-217ENST00000532877 SLC2A3P11169 496 aa14.84□□□□□ -0.03
COL16A1-217ENST00000532877 CTNNA2P26232 953 aa14.84□□□□□ -0.03
COL16A1-217ENST00000532877 ZXDBP98169 803 aa14.84□□□□□ -0.03
COL16A1-217ENST00000532877 SCAPQ12770 1279 aa14.84□□□□□ -0.03
COL16A1-217ENST00000532877 NUGGCQ68CJ6 796 aa14.84□□□□□ -0.03
COL16A1-217ENST00000532877 POLNQ7Z5Q5 900 aa14.84□□□□□ -0.03
COL16A1-217ENST00000532877 NTAN1Q96AB6 310 aa14.84□□□□□ -0.03
COL16A1-217ENST00000532877 NECTIN4Q96NY8 510 aa14.84□□□□□ -0.03
COL16A1-217ENST00000532877 SNRNP25Q9BV90 132 aaKnown RBP14.84□□□□□ -0.03
COL16A1-217ENST00000532877 TLR10Q9BXR5 811 aa14.84□□□□□ -0.03
COL16A1-217ENST00000532877 TKTL2Q9H0I9 626 aa14.84□□□□□ -0.03
COL16A1-217ENST00000532877 TMPRSS4Q9NRS4 437 aa14.84□□□□□ -0.03
COL16A1-217ENST00000532877 GKN1Q9NS71 199 aa14.84□□□□□ -0.03
COL16A1-217ENST00000532877 ARHGEF38Q9NXL2 777 aa14.84□□□□□ -0.03
COL16A1-217ENST00000532877 FZD10Q9ULW2 581 aa14.84□□□□□ -0.03
COL16A1-217ENST00000532877 CCL26Q9Y258 94 aa14.84□□□□□ -0.03
COL16A1-217ENST00000532877 CCDC66A2RUB6 948 aa14.83□□□□□ -0.04
COL16A1-217ENST00000532877 KCNU1A8MYU2 1149 aa14.83□□□□□ -0.04
COL16A1-217ENST00000532877 ENC1O14682 589 aa14.83□□□□□ -0.04
COL16A1-217ENST00000532877 DDX3YO15523 660 aaKnown RBP14.83□□□□□ -0.04
COL16A1-217ENST00000532877 ZNF500O60304 480 aaPredicted RBP14.83□□□□□ -0.04
COL16A1-217ENST00000532877 MOCS2O96007 188 aaPredicted RBP14.83□□□□□ -0.04
COL16A1-217ENST00000532877 WEE1P30291 646 aa14.83□□□□□ -0.04
COL16A1-217ENST00000532877 ADRA1BP35368 520 aa14.83□□□□□ -0.04
COL16A1-217ENST00000532877 DNA2P51530 1060 aa14.83□□□□□ -0.04
COL16A1-217ENST00000532877 AIF1P55008 147 aa14.83□□□□□ -0.04
COL16A1-217ENST00000532877 SMAD4Q13485 552 aaKnown RBP14.83□□□□□ -0.04
COL16A1-217ENST00000532877 ARL13BQ3SXY8 428 aa14.83□□□□□ -0.04
COL16A1-217ENST00000532877 KCNT1Q5JUK3 1230 aa14.83□□□□□ -0.04
COL16A1-217ENST00000532877 SYT10Q6XYQ8 523 aa14.83□□□□□ -0.04
COL16A1-217ENST00000532877 PRSS33Q8NF86 280 aa14.83□□□□□ -0.04
COL16A1-217ENST00000532877 ZSCAN18Q8TBC5 510 aaPredicted RBP14.83□□□□□ -0.04
COL16A1-217ENST00000532877 TEKT4Q8WW24 435 aa14.83□□□□□ -0.04
COL16A1-217ENST00000532877 ALG3Q92685 438 aa14.83□□□□□ -0.04
COL16A1-217ENST00000532877 USP13Q92995 863 aaPredicted RBP14.83□□□□□ -0.04
COL16A1-217ENST00000532877 WBP2Q969T9 261 aa14.83□□□□□ -0.04
COL16A1-217ENST00000532877 ACSF2Q96CM8 615 aaPredicted RBP14.83□□□□□ -0.04
COL16A1-217ENST00000532877 TDP1Q9NUW8 608 aa14.83□□□□□ -0.04
COL16A1-217ENST00000532877 KLHL11Q9NVR0 708 aa14.83□□□□□ -0.04
COL16A1-217ENST00000532877 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.83□□□□□ -0.04
COL16A1-217ENST00000532877 GPATCH2LQ9NWQ4 482 aa14.83□□□□□ -0.04
COL16A1-217ENST00000532877 GDE1Q9NZC3 331 aa14.83□□□□□ -0.04
COL16A1-217ENST00000532877 DNAI1Q9UI46 699 aa14.83□□□□□ -0.04
COL16A1-217ENST00000532877 CDH7Q9ULB5 785 aa14.83□□□□□ -0.04
COL16A1-217ENST00000532877 AP4E1Q9UPM8 1137 aa14.83□□□□□ -0.04
COL16A1-217ENST00000532877 DMDP11532 3685 aa14.83□□□□□ -0.04
COL16A1-217ENST00000532877 LEFTY2O00292 366 aa14.82□□□□□ -0.04
COL16A1-217ENST00000532877 GREM1O60565 184 aa14.82□□□□□ -0.04
COL16A1-217ENST00000532877 ATP1A1P05023 1023 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms