RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 KDF1Q8NAX2 398 aaPredicted RBP17.86■□□□□ 0.45
RPUSD4-207ENST00000532800 UBA3Q8TBC4 463 aa17.86■□□□□ 0.45
RPUSD4-207ENST00000532800 EDEM1Q92611 657 aa17.86■□□□□ 0.45
RPUSD4-207ENST00000532800 FOXJ1Q92949 421 aa17.86■□□□□ 0.45
RPUSD4-207ENST00000532800 CAMK1GQ96NX5 476 aa17.86■□□□□ 0.45
RPUSD4-207ENST00000532800 FAM124BQ9H5Z6 455 aaPredicted RBP17.86■□□□□ 0.45
RPUSD4-207ENST00000532800 LRRC4Q9HBW1 653 aa17.86■□□□□ 0.45
RPUSD4-207ENST00000532800 ITM2CQ9NQX7 267 aa17.86■□□□□ 0.45
RPUSD4-207ENST00000532800 DNAAF2Q9NVR5 837 aaKnown RBP17.86■□□□□ 0.45
RPUSD4-207ENST00000532800 KLK13Q9UKR3 277 aa17.86■□□□□ 0.45
RPUSD4-207ENST00000532800 YJEFN3A6XGL0 299 aa17.85■□□□□ 0.45
RPUSD4-207ENST00000532800 MEI4A8MW99 385 aa17.85■□□□□ 0.45
RPUSD4-207ENST00000532800 E7ENQ6 273 aa17.85■□□□□ 0.45
RPUSD4-207ENST00000532800 NPC1O15118 1278 aa17.85■□□□□ 0.45
RPUSD4-207ENST00000532800 MSI1O43347 362 aaKnown RBP17.85■□□□□ 0.45
RPUSD4-207ENST00000532800 SYNCRIPO60506 623 aaKnown RBP17.85■□□□□ 0.45
RPUSD4-207ENST00000532800 GJB3O75712 270 aa17.85■□□□□ 0.45
RPUSD4-207ENST00000532800 NCAM1P13591 858 aa17.85■□□□□ 0.45
RPUSD4-207ENST00000532800 TPMTP51580 245 aa17.85■□□□□ 0.45
RPUSD4-207ENST00000532800 GRIK2Q13002 908 aa17.85■□□□□ 0.45
RPUSD4-207ENST00000532800 EIF4HQ15056 248 aaKnown RBP17.85■□□□□ 0.45
RPUSD4-207ENST00000532800 ZCCHC9Q8N567 271 aaKnown RBP17.85■□□□□ 0.45
RPUSD4-207ENST00000532800 SIPA1Q96FS4 1042 aa17.85■□□□□ 0.45
RPUSD4-207ENST00000532800 TSG101Q99816 390 aa17.85■□□□□ 0.45
RPUSD4-207ENST00000532800 RMND1Q9NWS8 449 aa17.85■□□□□ 0.45
RPUSD4-207ENST00000532800 HESX1Q9UBX0 185 aa17.85■□□□□ 0.45
RPUSD4-207ENST00000532800 SUSD2Q9UGT4 822 aa17.85■□□□□ 0.45
RPUSD4-207ENST00000532800 NUMA1Q14980 2115 aa17.84■□□□□ 0.45
RPUSD4-207ENST00000532800 O00370 1275 aa17.84■□□□□ 0.45
RPUSD4-207ENST00000532800 SH3BP5O60239 455 aa17.84■□□□□ 0.45
RPUSD4-207ENST00000532800 EPHX1P07099 455 aa17.84■□□□□ 0.45
RPUSD4-207ENST00000532800 HLA-EP13747 358 aa17.84■□□□□ 0.45
RPUSD4-207ENST00000532800 GNSP15586 552 aa17.84■□□□□ 0.45
RPUSD4-207ENST00000532800 SGSHP51688 502 aa17.84■□□□□ 0.45
RPUSD4-207ENST00000532800 ZNF132P52740 706 aa17.84■□□□□ 0.45
RPUSD4-207ENST00000532800 FKBP3Q00688 224 aaKnown RBP17.84■□□□□ 0.45
RPUSD4-207ENST00000532800 MPPE1Q53F39 396 aa17.84■□□□□ 0.45
RPUSD4-207ENST00000532800 COBLL1Q53SF7 1204 aa17.84■□□□□ 0.45
RPUSD4-207ENST00000532800 WDR45BQ5MNZ6 344 aa17.84■□□□□ 0.45
RPUSD4-207ENST00000532800 BSPRYQ5W0U4 402 aa17.84■□□□□ 0.45
RPUSD4-207ENST00000532800 SERPINA13PQ6UXR4 307 aa17.84■□□□□ 0.45
RPUSD4-207ENST00000532800 RNF139Q8WU17 664 aa17.84■□□□□ 0.45
RPUSD4-207ENST00000532800 DNASE2BQ8WZ79 361 aa17.84■□□□□ 0.45
RPUSD4-207ENST00000532800 PRCCQ92733 491 aaPredicted RBP17.84■□□□□ 0.45
RPUSD4-207ENST00000532800 SLC35C1Q96A29 364 aa17.84■□□□□ 0.45
RPUSD4-207ENST00000532800 CCDC34Q96HJ3 373 aa17.84■□□□□ 0.45
RPUSD4-207ENST00000532800 IPO9Q96P70 1041 aaKnown RBP17.84■□□□□ 0.45
RPUSD4-207ENST00000532800 SLC2A11Q9BYW1 496 aa17.84■□□□□ 0.45
RPUSD4-207ENST00000532800 OLA1Q9NTK5 396 aaKnown RBP17.84■□□□□ 0.45
RPUSD4-207ENST00000532800 HBS1LQ9Y450 684 aaKnown RBP17.84■□□□□ 0.45
RPUSD4-207ENST00000532800 NEUROG3Q9Y4Z2 214 aa17.84■□□□□ 0.45
RPUSD4-207ENST00000532800 PIK3R2O00459 728 aa17.83■□□□□ 0.44
RPUSD4-207ENST00000532800 GABBR2O75899 941 aa17.83■□□□□ 0.44
RPUSD4-207ENST00000532800 VDRP11473 427 aa17.83■□□□□ 0.44
RPUSD4-207ENST00000532800 LCP1P13796 627 aa17.83■□□□□ 0.44
RPUSD4-207ENST00000532800 HLA-FP30511 346 aa17.83■□□□□ 0.44
RPUSD4-207ENST00000532800 HARS2P49590 506 aaKnown RBP17.83■□□□□ 0.44
RPUSD4-207ENST00000532800 RGS7P49802 495 aa17.83■□□□□ 0.44
RPUSD4-207ENST00000532800 PKDCCQ504Y2 493 aa17.83■□□□□ 0.44
RPUSD4-207ENST00000532800 DCAF12L1Q5VU92 463 aa17.83■□□□□ 0.44
RPUSD4-207ENST00000532800 SIX6OS1Q8N1H7 587 aa17.83■□□□□ 0.44
RPUSD4-207ENST00000532800 ZNF366Q8N895 744 aa17.83■□□□□ 0.44
RPUSD4-207ENST00000532800 CYB5D2Q8WUJ1 264 aa17.83■□□□□ 0.44
RPUSD4-207ENST00000532800 TFAP2BQ92481 460 aa17.83■□□□□ 0.44
RPUSD4-207ENST00000532800 GSDMAQ96QA5 445 aa17.83■□□□□ 0.44
RPUSD4-207ENST00000532800 MIR1-1HGQ9H1L0 117 aa17.83■□□□□ 0.44
RPUSD4-207ENST00000532800 ARMCX3Q9UH62 379 aaPredicted RBP17.83■□□□□ 0.44
RPUSD4-207ENST00000532800 DMXL2Q8TDJ6 3036 aa17.82■□□□□ 0.44
RPUSD4-207ENST00000532800 A0A1B0GTW7 788 aa17.82■□□□□ 0.44
RPUSD4-207ENST00000532800 CALCAP01258 141 aa17.82■□□□□ 0.44
RPUSD4-207ENST00000532800 IGLV3-19P01714 112 aa17.82■□□□□ 0.44
RPUSD4-207ENST00000532800 SETSIPP0DME0 302 aa17.82■□□□□ 0.44
RPUSD4-207ENST00000532800 DAOAP59103 153 aa17.82■□□□□ 0.44
RPUSD4-207ENST00000532800 YWHAEP62258 255 aaKnown RBP17.82■□□□□ 0.44
RPUSD4-207ENST00000532800 ARID5AQ03989 594 aa17.82■□□□□ 0.44
RPUSD4-207ENST00000532800 FAM124AQ86V42 546 aa17.82■□□□□ 0.44
RPUSD4-207ENST00000532800 CHCHD4Q8N4Q1 142 aa17.82■□□□□ 0.44
RPUSD4-207ENST00000532800 ENGASEQ8NFI3 743 aa17.82■□□□□ 0.44
RPUSD4-207ENST00000532800 CADM4Q8NFZ8 388 aa17.82■□□□□ 0.44
RPUSD4-207ENST00000532800 SPATA20Q8TB22 786 aa17.82■□□□□ 0.44
RPUSD4-207ENST00000532800 WFDC5Q8TCV5 224 aa17.82■□□□□ 0.44
RPUSD4-207ENST00000532800 ZCCHC14Q8WYQ9 949 aaKnown RBP17.82■□□□□ 0.44
RPUSD4-207ENST00000532800 KCTD13Q8WZ19 329 aa17.82■□□□□ 0.44
RPUSD4-207ENST00000532800 KAT5Q92993 513 aa17.82■□□□□ 0.44
RPUSD4-207ENST00000532800 ZSWIM1Q9BR11 485 aa17.82■□□□□ 0.44
RPUSD4-207ENST00000532800 ABCB8Q9NUT2 735 aa17.82■□□□□ 0.44
RPUSD4-207ENST00000532800 STOML2Q9UJZ1 356 aa17.82■□□□□ 0.44
RPUSD4-207ENST00000532800 TMEM8BA6NDV4 472 aa17.81■□□□□ 0.44
RPUSD4-207ENST00000532800 METTL12A8MUP2 240 aa17.81■□□□□ 0.44
RPUSD4-207ENST00000532800 ACADMP11310 421 aa17.81■□□□□ 0.44
RPUSD4-207ENST00000532800 TBXAS1P24557 533 aaPredicted RBP17.81■□□□□ 0.44
RPUSD4-207ENST00000532800 FMO5P49326 533 aa17.81■□□□□ 0.44
RPUSD4-207ENST00000532800 LRRC63Q05C16 580 aa17.81■□□□□ 0.44
RPUSD4-207ENST00000532800 FNDC3BQ53EP0 1204 aaKnown RBP17.81■□□□□ 0.44
RPUSD4-207ENST00000532800 PMF1Q6P1K2 205 aa17.81■□□□□ 0.44
RPUSD4-207ENST00000532800 TMEM270Q6UE05 265 aa17.81■□□□□ 0.44
RPUSD4-207ENST00000532800 CHST9Q7L1S5 443 aa17.81■□□□□ 0.44
RPUSD4-207ENST00000532800 NAXDQ8IW45 347 aa17.81■□□□□ 0.44
RPUSD4-207ENST00000532800 OR2T3Q8NH03 318 aa17.81■□□□□ 0.44
RPUSD4-207ENST00000532800 CLEC4CQ8WTT0 213 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms