RNA–Protein interactions for RNA: ENST00000532446.5

PPP1CA-208, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 1,465 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-208ENST00000532446 CCDC85BQ15834 202 aaPredicted RBP18.65■□□□□ 0.58
PPP1CA-208ENST00000532446 ARL13BQ3SXY8 428 aa18.65■□□□□ 0.58
PPP1CA-208ENST00000532446 PAPD7Q5XG87 772 aaKnown RBP18.65■□□□□ 0.58
PPP1CA-208ENST00000532446 NPAS3Q8IXF0 933 aa18.65■□□□□ 0.58
PPP1CA-208ENST00000532446 KATNAL2Q8IYT4 538 aa18.65■□□□□ 0.58
PPP1CA-208ENST00000532446 ADAMTS19Q8TE59 1207 aa18.65■□□□□ 0.58
PPP1CA-208ENST00000532446 PLD4Q96BZ4 506 aa18.65■□□□□ 0.58
PPP1CA-208ENST00000532446 TMPRSS4Q9NRS4 437 aa18.65■□□□□ 0.58
PPP1CA-208ENST00000532446 SMPD4Q9NXE4 827 aa18.65■□□□□ 0.58
PPP1CA-208ENST00000532446 DDX56Q9NY93 547 aaKnown RBP18.65■□□□□ 0.58
PPP1CA-208ENST00000532446 SNX12Q9UMY4 172 aa18.65■□□□□ 0.58
PPP1CA-208ENST00000532446 ARHGAP26Q9UNA1 814 aa18.65■□□□□ 0.58
PPP1CA-208ENST00000532446 CPQQ9Y646 472 aa18.65■□□□□ 0.58
PPP1CA-208ENST00000532446 C5orf42Q9H799 3197 aa18.64■□□□□ 0.57
PPP1CA-208ENST00000532446 APOEP02649 317 aa18.64■□□□□ 0.57
PPP1CA-208ENST00000532446 WEE1P30291 646 aa18.64■□□□□ 0.57
PPP1CA-208ENST00000532446 AVPR1AP37288 418 aa18.64■□□□□ 0.57
PPP1CA-208ENST00000532446 DNA2P51530 1060 aa18.64■□□□□ 0.57
PPP1CA-208ENST00000532446 RWDD2BP57060 319 aa18.64■□□□□ 0.57
PPP1CA-208ENST00000532446 CBX2Q14781 532 aaPredicted RBP18.64■□□□□ 0.57
PPP1CA-208ENST00000532446 NUGGCQ68CJ6 796 aa18.64■□□□□ 0.57
PPP1CA-208ENST00000532446 UNC45BQ8IWX7 931 aa18.64■□□□□ 0.57
PPP1CA-208ENST00000532446 HSPH1Q92598 858 aa18.64■□□□□ 0.57
PPP1CA-208ENST00000532446 ACSF2Q96CM8 615 aaPredicted RBP18.64■□□□□ 0.57
PPP1CA-208ENST00000532446 HAPLN3Q96S86 360 aa18.64■□□□□ 0.57
PPP1CA-208ENST00000532446 GPATCH2LQ9NWQ4 482 aa18.64■□□□□ 0.57
PPP1CA-208ENST00000532446 CD207Q9UJ71 328 aa18.64■□□□□ 0.57
PPP1CA-208ENST00000532446 AP4E1Q9UPM8 1137 aa18.64■□□□□ 0.57
PPP1CA-208ENST00000532446 ARSEP51690 589 aa18.63■□□□□ 0.57
PPP1CA-208ENST00000532446 CLUL1Q15846 466 aa18.63■□□□□ 0.57
PPP1CA-208ENST00000532446 DPYSL2Q16555 572 aa18.63■□□□□ 0.57
PPP1CA-208ENST00000532446 CA9Q16790 459 aa18.63■□□□□ 0.57
PPP1CA-208ENST00000532446 EFHC2Q5JST6 749 aa18.63■□□□□ 0.57
PPP1CA-208ENST00000532446 DCAF12L1Q5VU92 463 aa18.63■□□□□ 0.57
PPP1CA-208ENST00000532446 GET4Q7L5D6 327 aaPredicted RBP18.63■□□□□ 0.57
PPP1CA-208ENST00000532446 ATP6V0D2Q8N8Y2 350 aa18.63■□□□□ 0.57
PPP1CA-208ENST00000532446 PPM1EQ8WY54 764 aa18.63■□□□□ 0.57
PPP1CA-208ENST00000532446 SUSD6Q92537 303 aa18.63■□□□□ 0.57
PPP1CA-208ENST00000532446 RAPGEF5Q92565 580 aa18.63■□□□□ 0.57
PPP1CA-208ENST00000532446 FGF13Q92913 245 aa18.63■□□□□ 0.57
PPP1CA-208ENST00000532446 WBP2Q969T9 261 aa18.63■□□□□ 0.57
PPP1CA-208ENST00000532446 BTN2A3PQ96KV6 586 aa18.63■□□□□ 0.57
PPP1CA-208ENST00000532446 MAGEB5Q9BZ81 275 aa18.63■□□□□ 0.57
PPP1CA-208ENST00000532446 UBE2ZQ9H832 354 aaPredicted RBP18.63■□□□□ 0.57
PPP1CA-208ENST00000532446 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.63■□□□□ 0.57
PPP1CA-208ENST00000532446 KLHL11Q9NVR0 708 aa18.63■□□□□ 0.57
PPP1CA-208ENST00000532446 XPO7Q9UIA9 1087 aaKnown RBP18.63■□□□□ 0.57
PPP1CA-208ENST00000532446 KCNK3O14649 394 aa18.62■□□□□ 0.57
PPP1CA-208ENST00000532446 PAGE1O75459 146 aa18.62■□□□□ 0.57
PPP1CA-208ENST00000532446 KLKB1P03952 638 aa18.62■□□□□ 0.57
PPP1CA-208ENST00000532446 PRLRP16471 622 aa18.62■□□□□ 0.57
PPP1CA-208ENST00000532446 L1CAMP32004 1257 aa18.62■□□□□ 0.57
PPP1CA-208ENST00000532446 HARS2P49590 506 aaKnown RBP18.62■□□□□ 0.57
PPP1CA-208ENST00000532446 AMPD2Q01433 879 aa18.62■□□□□ 0.57
PPP1CA-208ENST00000532446 MTA1Q13330 715 aa18.62■□□□□ 0.57
PPP1CA-208ENST00000532446 ARID3BQ8IVW6 561 aaPredicted RBP18.62■□□□□ 0.57
PPP1CA-208ENST00000532446 EXD1Q8NHP7 514 aa18.62■□□□□ 0.57
PPP1CA-208ENST00000532446 FAM71BQ8TC56 605 aa18.62■□□□□ 0.57
PPP1CA-208ENST00000532446 ZNF592Q92610 1267 aa18.62■□□□□ 0.57
PPP1CA-208ENST00000532446 USP13Q92995 863 aaPredicted RBP18.62■□□□□ 0.57
PPP1CA-208ENST00000532446 AZIN2Q96A70 460 aa18.62■□□□□ 0.57
PPP1CA-208ENST00000532446 PSMB7Q99436 277 aa18.62■□□□□ 0.57
PPP1CA-208ENST00000532446 SMG9Q9H0W8 520 aaKnown RBP18.62■□□□□ 0.57
PPP1CA-208ENST00000532446 OSBPL2Q9H1P3 480 aa18.62■□□□□ 0.57
PPP1CA-208ENST00000532446 CARD9Q9H257 536 aa18.62■□□□□ 0.57
PPP1CA-208ENST00000532446 DHX35Q9H5Z1 703 aaKnown RBP18.62■□□□□ 0.57
PPP1CA-208ENST00000532446 TDP1Q9NUW8 608 aa18.62■□□□□ 0.57
PPP1CA-208ENST00000532446 GDE1Q9NZC3 331 aa18.62■□□□□ 0.57
PPP1CA-208ENST00000532446 SLC12A6Q9UHW9 1150 aa18.62■□□□□ 0.57
PPP1CA-208ENST00000532446 CCL26Q9Y258 94 aa18.62■□□□□ 0.57
PPP1CA-208ENST00000532446 XIRP2A4UGR9 3374 aa18.62■□□□□ 0.57
PPP1CA-208ENST00000532446 C3orf70A6NLC5 250 aaPredicted RBP18.61■□□□□ 0.57
PPP1CA-208ENST00000532446 H3BQ06 376 aaPredicted RBP18.61■□□□□ 0.57
PPP1CA-208ENST00000532446 LEFTY2O00292 366 aa18.61■□□□□ 0.57
PPP1CA-208ENST00000532446 GREM1O60565 184 aa18.61■□□□□ 0.57
PPP1CA-208ENST00000532446 ZRANB2O95218 330 aaKnown RBP eCLIP18.61■□□□□ 0.57
PPP1CA-208ENST00000532446 PRAMEF12O95522 483 aa18.61■□□□□ 0.57
PPP1CA-208ENST00000532446 MOCS2O96007 188 aaPredicted RBP18.61■□□□□ 0.57
PPP1CA-208ENST00000532446 KRT1P04264 644 aa18.61■□□□□ 0.57
PPP1CA-208ENST00000532446 IRF1P10914 325 aa18.61■□□□□ 0.57
PPP1CA-208ENST00000532446 KDELR1P24390 212 aa18.61■□□□□ 0.57
PPP1CA-208ENST00000532446 CORO1AP31146 461 aaKnown RBP18.61■□□□□ 0.57
PPP1CA-208ENST00000532446 CXCR5P32302 372 aa18.61■□□□□ 0.57
PPP1CA-208ENST00000532446 ZFYVE27Q5T4F4 411 aa18.61■□□□□ 0.57
PPP1CA-208ENST00000532446 DDX42Q86XP3 938 aaKnown RBP eCLIP18.61■□□□□ 0.57
PPP1CA-208ENST00000532446 RCOR2Q8IZ40 523 aa18.61■□□□□ 0.57
PPP1CA-208ENST00000532446 PYROXD2Q8N2H3 581 aa18.61■□□□□ 0.57
PPP1CA-208ENST00000532446 KCTD6Q8NC69 237 aa18.61■□□□□ 0.57
PPP1CA-208ENST00000532446 KIF18AQ8NI77 898 aa18.61■□□□□ 0.57
PPP1CA-208ENST00000532446 ZSCAN18Q8TBC5 510 aaPredicted RBP18.61■□□□□ 0.57
PPP1CA-208ENST00000532446 NECTIN4Q96NY8 510 aa18.61■□□□□ 0.57
PPP1CA-208ENST00000532446 KCTD15Q96SI1 283 aaPredicted RBP18.61■□□□□ 0.57
PPP1CA-208ENST00000532446 OSBPL9Q96SU4 736 aa18.61■□□□□ 0.57
PPP1CA-208ENST00000532446 COL25A1Q9BXS0 654 aaPredicted RBP18.61■□□□□ 0.57
PPP1CA-208ENST00000532446 POMKQ9H5K3 350 aa18.61■□□□□ 0.57
PPP1CA-208ENST00000532446 PCDH18Q9HCL0 1135 aa18.61■□□□□ 0.57
PPP1CA-208ENST00000532446 CDH7Q9ULB5 785 aa18.61■□□□□ 0.57
PPP1CA-208ENST00000532446 USP15Q9Y4E8 981 aaPredicted RBP18.61■□□□□ 0.57
PPP1CA-208ENST00000532446 LRRD1A4D1F6 860 aa18.6■□□□□ 0.57
PPP1CA-208ENST00000532446 PI4K2BG5E9Z4 385 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms