RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 OXCT2Q9BYC2 517 aaPredicted RBP11.61□□□□□ -0.55
PTPRK-221ENST00000532331 TKTL2Q9H0I9 626 aa11.61□□□□□ -0.55
PTPRK-221ENST00000532331 ZDHHC6Q9H6R6 413 aa11.61□□□□□ -0.55
PTPRK-221ENST00000532331 MAN1C1Q9NR34 630 aa11.61□□□□□ -0.55
PTPRK-221ENST00000532331 RIC8BQ9NVN3 520 aa11.61□□□□□ -0.55
PTPRK-221ENST00000532331 CDY1Q9Y6F8 540 aa11.61□□□□□ -0.55
PTPRK-221ENST00000532331 ROBO3Q96MS0 1386 aa11.61□□□□□ -0.55
PTPRK-221ENST00000532331 TMEM120BA0PK00 339 aa11.61□□□□□ -0.55
PTPRK-221ENST00000532331 CCL16O15467 120 aa11.61□□□□□ -0.55
PTPRK-221ENST00000532331 CLASP2O75122 1294 aaKnown RBP11.61□□□□□ -0.55
PTPRK-221ENST00000532331 FGRP09769 529 aa11.61□□□□□ -0.55
PTPRK-221ENST00000532331 RAD23BP54727 409 aa11.61□□□□□ -0.55
PTPRK-221ENST00000532331 SH3D19Q5HYK7 790 aa11.61□□□□□ -0.55
PTPRK-221ENST00000532331 OLFML2BQ68BL8 750 aa11.61□□□□□ -0.55
PTPRK-221ENST00000532331 LVRNQ6Q4G3 990 aa11.61□□□□□ -0.55
PTPRK-221ENST00000532331 PARP9Q8IXQ6 854 aa11.61□□□□□ -0.55
PTPRK-221ENST00000532331 CXorf40AQ8TE69 158 aa11.61□□□□□ -0.55
PTPRK-221ENST00000532331 ZNF473Q8WTR7 871 aaKnown RBP11.61□□□□□ -0.55
PTPRK-221ENST00000532331 MTO1Q9Y2Z2 717 aaKnown RBP11.61□□□□□ -0.55
PTPRK-221ENST00000532331 MEI4A8MW99 385 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 SOAT2O75908 522 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 MAPK7Q13164 816 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 FAM83EQ2M2I3 478 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 ZC3H12BQ5HYM0 836 aaKnown RBP11.6□□□□□ -0.55
PTPRK-221ENST00000532331 GPR158Q5T848 1215 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 C16orf89Q6UX73 402 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 RFX8Q6ZV50 586 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 ILDR2Q71H61 639 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 KCNK18Q7Z418 384 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 ZNF296Q8WUU4 475 aaPredicted RBP11.6□□□□□ -0.55
PTPRK-221ENST00000532331 PAWRQ96IZ0 340 aaKnown RBP11.6□□□□□ -0.55
PTPRK-221ENST00000532331 TBCBQ99426 244 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 AASDHPPTQ9NRN7 309 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 DRG1Q9Y295 367 aaKnown RBP11.6□□□□□ -0.55
PTPRK-221ENST00000532331 MRPS17Q9Y2R5 130 aaKnown RBP11.6□□□□□ -0.55
PTPRK-221ENST00000532331 MTA2O94776 668 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 FAXCQ5TGI0 409 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 MROH9Q5TGP6 573 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 DENND1CQ8IV53 801 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 ARHGEF19Q8IW93 802 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 SPPL2BQ8TCT7 592 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 ELMO3Q96BJ8 720 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 SCLYQ96I15 445 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 CCT8L2Q96SF2 557 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 KLF6Q99612 283 aaPredicted RBP11.6□□□□□ -0.55
PTPRK-221ENST00000532331 BBS2Q9BXC9 721 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 TFR2Q9UP52 801 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 E2F8A0AVK6 867 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 APOA4P06727 396 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 SERPINA4P29622 427 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 HALP42357 657 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 MTM1Q13496 603 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 NFIL3Q16649 462 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 MYO1HQ8N1T3 1032 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 E2F7Q96AV8 911 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 ZIM3Q96PE6 472 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 ZNF510Q9Y2H8 683 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 DERAQ9Y315 318 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 PROSCO94903 275 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 TRIM16O95361 564 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 SNHG28P0DPA3 235 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 ENO3P13929 434 aaPredicted RBP11.6□□□□□ -0.55
PTPRK-221ENST00000532331 HIRAP54198 1017 aaPredicted RBP11.6□□□□□ -0.55
PTPRK-221ENST00000532331 ZNF438Q7Z4V0 828 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 CHPFQ8IZ52 775 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 TOP6BLQ8N6T0 577 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 KCNK16Q96T55 309 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 ARHGAP26Q9UNA1 814 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 FAM32AQ9Y421 112 aaKnown RBP11.6□□□□□ -0.55
PTPRK-221ENST00000532331 TISP43B9A030 160 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 TNFSF9P41273 254 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 SLC29A2Q14542 456 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 TRMT11Q7Z4G4 463 aaKnown RBP11.6□□□□□ -0.55
PTPRK-221ENST00000532331 NT5DC3Q86UY8 548 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 ETNPPLQ8TBG4 499 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 SERPINB12Q96P63 405 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 SUFUQ9UMX1 484 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 DYRK1BQ9Y463 629 aa11.6□□□□□ -0.55
PTPRK-221ENST00000532331 ADGRA2Q96PE1 1338 aa11.59□□□□□ -0.55
PTPRK-221ENST00000532331 KLRG2A4D1S0 409 aaPredicted RBP11.59□□□□□ -0.55
PTPRK-221ENST00000532331 VGLL3A8MV65 326 aa11.59□□□□□ -0.55
PTPRK-221ENST00000532331 F8VP50 259 aa11.59□□□□□ -0.55
PTPRK-221ENST00000532331 EIF3HO15372 352 aaKnown RBP eCLIP11.59□□□□□ -0.552e-6■□□□□ 10.9
PTPRK-221ENST00000532331 FGFR1P11362 822 aa11.59□□□□□ -0.55
PTPRK-221ENST00000532331 ATP6V1E1P36543 226 aa11.59□□□□□ -0.55
PTPRK-221ENST00000532331 SMAD3P84022 425 aaKnown RBP11.59□□□□□ -0.55
PTPRK-221ENST00000532331 AP1ARQ63HQ0 302 aa11.59□□□□□ -0.55
PTPRK-221ENST00000532331 RPAINQ86UA6 219 aa11.59□□□□□ -0.55
PTPRK-221ENST00000532331 NOA1Q8NC60 698 aaKnown RBP11.59□□□□□ -0.55
PTPRK-221ENST00000532331 DBF4BQ8NFT6 615 aa11.59□□□□□ -0.55
PTPRK-221ENST00000532331 MANSC1Q9H8J5 431 aa11.59□□□□□ -0.55
PTPRK-221ENST00000532331 SCAMP3O14828 347 aaKnown RBP11.59□□□□□ -0.55
PTPRK-221ENST00000532331 TBL1XO60907 577 aa11.59□□□□□ -0.55
PTPRK-221ENST00000532331 ZNF135P52742 658 aaPredicted RBP11.59□□□□□ -0.55
PTPRK-221ENST00000532331 GPM6BQ13491 265 aa11.59□□□□□ -0.55
PTPRK-221ENST00000532331 TARBP2Q15633 366 aaKnown RBP11.59□□□□□ -0.55
PTPRK-221ENST00000532331 DDR2Q16832 855 aa11.59□□□□□ -0.55
PTPRK-221ENST00000532331 EEF1DP3Q658K8 133 aa11.59□□□□□ -0.55
PTPRK-221ENST00000532331 LRRC52Q8N7C0 313 aa11.59□□□□□ -0.55
PTPRK-221ENST00000532331 MAB21L3Q8N8X9 362 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms