RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 MYO6Q9UM54 1294 aa5.21□□□□□ -1.58
PTPRK-220ENST00000531466 ISM1B1AKI9 464 aa5.2□□□□□ -1.58
PTPRK-220ENST00000531466 PODXLO00592 558 aa5.2□□□□□ -1.58
PTPRK-220ENST00000531466 ZNF432O94892 652 aa5.2□□□□□ -1.58
PTPRK-220ENST00000531466 HOXD12P35452 270 aa5.2□□□□□ -1.58
PTPRK-220ENST00000531466 PBX1P40424 430 aa5.2□□□□□ -1.58
PTPRK-220ENST00000531466 MZT2AQ6P582 158 aa5.2□□□□□ -1.58
PTPRK-220ENST00000531466 INPP5DQ92835 1189 aa5.2□□□□□ -1.58
PTPRK-220ENST00000531466 HTATIP2Q9BUP3 242 aa5.2□□□□□ -1.58
PTPRK-220ENST00000531466 SELENOOQ9BVL4 669 aa5.2□□□□□ -1.58
PTPRK-220ENST00000531466 WNT16Q9UBV4 365 aa5.2□□□□□ -1.58
PTPRK-220ENST00000531466 ICAM5Q9UMF0 924 aa5.2□□□□□ -1.58
PTPRK-220ENST00000531466 TTC34A8MYJ7 566 aa5.19□□□□□ -1.58
PTPRK-220ENST00000531466 INMTO95050 263 aa5.19□□□□□ -1.58
PTPRK-220ENST00000531466 MAP4K4O95819 1239 aaPredicted RBP5.19□□□□□ -1.58
PTPRK-220ENST00000531466 PLGP00747 810 aaPredicted RBP5.19□□□□□ -1.58
PTPRK-220ENST00000531466 DUSP1P28562 367 aa5.19□□□□□ -1.58
PTPRK-220ENST00000531466 HILS1P60008 231 aa5.19□□□□□ -1.58
PTPRK-220ENST00000531466 ACOX1Q15067 660 aa5.19□□□□□ -1.58
PTPRK-220ENST00000531466 CNN3Q15417 329 aaKnown RBP5.19□□□□□ -1.58
PTPRK-220ENST00000531466 FBXL22Q6P050 247 aa5.19□□□□□ -1.58
PTPRK-220ENST00000531466 UNC13DQ70J99 1090 aa5.19□□□□□ -1.58
PTPRK-220ENST00000531466 MORC1Q86VD1 984 aa5.19□□□□□ -1.58
PTPRK-220ENST00000531466 MBD3L2Q8NHZ7 208 aaPredicted RBP5.19□□□□□ -1.58
PTPRK-220ENST00000531466 GJA10Q969M2 543 aa5.19□□□□□ -1.58
PTPRK-220ENST00000531466 WDR83Q9BRX9 315 aaKnown RBP5.19□□□□□ -1.58
PTPRK-220ENST00000531466 RMI1Q9H9A7 625 aa5.19□□□□□ -1.58
PTPRK-220ENST00000531466 ZNF180Q9UJW8 692 aa5.19□□□□□ -1.58
PTPRK-220ENST00000531466 TPCN1Q9ULQ1 816 aa5.19□□□□□ -1.58
PTPRK-220ENST00000531466 TRIP12Q14669 1992 aaPredicted RBP5.18□□□□□ -1.58
PTPRK-220ENST00000531466 PIN1Q13526 163 aaPredicted RBP5.18□□□□□ -1.58
PTPRK-220ENST00000531466 IZUMO4Q1ZYL8 232 aa5.18□□□□□ -1.58
PTPRK-220ENST00000531466 PRAMEF19Q5SWL8 479 aa5.18□□□□□ -1.58
PTPRK-220ENST00000531466 ASPHD1Q5U4P2 390 aa5.18□□□□□ -1.58
PTPRK-220ENST00000531466 LIPMQ5VYY2 423 aa5.18□□□□□ -1.58
PTPRK-220ENST00000531466 DHRS13Q6UX07 377 aa5.18□□□□□ -1.58
PTPRK-220ENST00000531466 EPM2AIP1Q7L775 607 aaPredicted RBP5.18□□□□□ -1.58
PTPRK-220ENST00000531466 RHPN2Q8IUC4 686 aa5.18□□□□□ -1.58
PTPRK-220ENST00000531466 TMEM255BQ8WV15 326 aa5.18□□□□□ -1.58
PTPRK-220ENST00000531466 WBP1Q96G27 269 aa5.18□□□□□ -1.58
PTPRK-220ENST00000531466 AS3MTQ9HBK9 375 aa5.18□□□□□ -1.58
PTPRK-220ENST00000531466 HIF1ANQ9NWT6 349 aa5.18□□□□□ -1.58
PTPRK-220ENST00000531466 DDX56Q9NY93 547 aaKnown RBP5.18□□□□□ -1.58
PTPRK-220ENST00000531466 PLK2Q9NYY3 685 aa5.18□□□□□ -1.58
PTPRK-220ENST00000531466 CTNND1O60716 968 aaKnown RBP5.17□□□□□ -1.58
PTPRK-220ENST00000531466 RFX2P48378 723 aa5.17□□□□□ -1.58
PTPRK-220ENST00000531466 CARSP49589 748 aaKnown RBP5.17□□□□□ -1.58
PTPRK-220ENST00000531466 COMPP49747 757 aaPredicted RBP5.17□□□□□ -1.58
PTPRK-220ENST00000531466 ZNF84P51523 738 aa5.17□□□□□ -1.58
PTPRK-220ENST00000531466 DGKQP52824 942 aa5.17□□□□□ -1.58
PTPRK-220ENST00000531466 FMO1Q01740 532 aa5.17□□□□□ -1.58
PTPRK-220ENST00000531466 KYAT3Q6YP21 454 aaKnown RBP5.17□□□□□ -1.58
PTPRK-220ENST00000531466 RTL10Q7L3V2 364 aa5.17□□□□□ -1.58
PTPRK-220ENST00000531466 SRGAP1Q7Z6B7 1085 aa5.17□□□□□ -1.58
PTPRK-220ENST00000531466 DDIASQ8IXT1 998 aa5.17□□□□□ -1.58
PTPRK-220ENST00000531466 KIAA0319LQ8IZA0 1049 aa5.17□□□□□ -1.58
PTPRK-220ENST00000531466 SUN3Q8TAQ9 357 aa5.17□□□□□ -1.58
PTPRK-220ENST00000531466 ELOVL1Q9BW60 279 aa5.17□□□□□ -1.58
PTPRK-220ENST00000531466 RTFDC1Q9BY42 306 aaPredicted RBP5.17□□□□□ -1.58
PTPRK-220ENST00000531466 TMEM60Q9H2L4 133 aa5.17□□□□□ -1.58
PTPRK-220ENST00000531466 C6orf106Q9H6K1 298 aaPredicted RBP5.17□□□□□ -1.58
PTPRK-220ENST00000531466 SIRT3Q9NTG7 399 aaPredicted RBP5.17□□□□□ -1.58
PTPRK-220ENST00000531466 PCDHGB1Q9Y5G3 927 aa5.17□□□□□ -1.58
PTPRK-220ENST00000531466 PRPF3O43395 683 aaKnown RBP5.16□□□□□ -1.58
PTPRK-220ENST00000531466 FRS3O43559 492 aa5.16□□□□□ -1.58
PTPRK-220ENST00000531466 AKR1A1P14550 325 aa5.16□□□□□ -1.58
PTPRK-220ENST00000531466 RHCEP18577 417 aa5.16□□□□□ -1.58
PTPRK-220ENST00000531466 DRD1P21728 446 aa5.16□□□□□ -1.58
PTPRK-220ENST00000531466 BFSP2Q13515 415 aa5.16□□□□□ -1.58
PTPRK-220ENST00000531466 KCNJ12Q14500 433 aa5.16□□□□□ -1.58
PTPRK-220ENST00000531466 OTUD3Q5T2D3 398 aaPredicted RBP5.16□□□□□ -1.58
PTPRK-220ENST00000531466 SKAP1Q86WV1 359 aa5.16□□□□□ -1.58
PTPRK-220ENST00000531466 CENPIQ92674 756 aaPredicted RBP5.16□□□□□ -1.58
PTPRK-220ENST00000531466 PHF21BQ96EK2 531 aa5.16□□□□□ -1.58
PTPRK-220ENST00000531466 SEZ6LQ9BYH1 1024 aa5.16□□□□□ -1.58
PTPRK-220ENST00000531466 SLC25A32Q9H2D1 315 aa5.16□□□□□ -1.58
PTPRK-220ENST00000531466 OGDHLQ9ULD0 1010 aa5.16□□□□□ -1.58
PTPRK-220ENST00000531466 EMSYQ7Z589 1322 aa5.16□□□□□ -1.58
PTPRK-220ENST00000531466 EVPLQ92817 2033 aa5.15□□□□□ -1.58
PTPRK-220ENST00000531466 DPPA5A6NC42 116 aa5.15□□□□□ -1.59
PTPRK-220ENST00000531466 NTN3O00634 580 aaPredicted RBP5.15□□□□□ -1.59
PTPRK-220ENST00000531466 IFNA2P01563 188 aa5.15□□□□□ -1.59
PTPRK-220ENST00000531466 WNT1P04628 370 aa5.15□□□□□ -1.59
PTPRK-220ENST00000531466 CIITAP33076 1130 aa5.15□□□□□ -1.59
PTPRK-220ENST00000531466 ANXA2RQ3ZCQ2 193 aa5.15□□□□□ -1.59
PTPRK-220ENST00000531466 WASHC2DQ5SRD0 308 aa5.15□□□□□ -1.59
PTPRK-220ENST00000531466 ISM2Q6H9L7 571 aa5.15□□□□□ -1.59
PTPRK-220ENST00000531466 HMBOX1Q6NT76 420 aa5.15□□□□□ -1.59
PTPRK-220ENST00000531466 CTU1Q7Z7A3 348 aaKnown RBP5.15□□□□□ -1.59
PTPRK-220ENST00000531466 SESTD1Q86VW0 696 aa5.15□□□□□ -1.59
PTPRK-220ENST00000531466 ZNF845Q96IR2 970 aaPredicted RBP5.15□□□□□ -1.59
PTPRK-220ENST00000531466 FAM227BQ96M60 508 aa5.15□□□□□ -1.59
PTPRK-220ENST00000531466 ZNF212Q9UDV6 495 aa5.15□□□□□ -1.59
PTPRK-220ENST00000531466 RGS17Q9UGC6 210 aaPredicted RBP5.15□□□□□ -1.59
PTPRK-220ENST00000531466 CAPN11Q9UMQ6 739 aa5.15□□□□□ -1.59
PTPRK-220ENST00000531466 RHODO00212 210 aa5.14□□□□□ -1.59
PTPRK-220ENST00000531466 ALDH1L1O75891 902 aa5.14□□□□□ -1.59
PTPRK-220ENST00000531466 ENO1P06733 434 aaKnown RBP5.14□□□□□ -1.59
PTPRK-220ENST00000531466 HOXC6P09630 235 aa5.14□□□□□ -1.59
PTPRK-220ENST00000531466 CPA1P15085 419 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms