RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 SRGAP2O75044 1071 aa19.76■□□□□ 0.75
SMPD1-205ENST00000531303 OLFM2O95897 454 aa19.76■□□□□ 0.75
SMPD1-205ENST00000531303 TUBB4AP04350 444 aa19.76■□□□□ 0.75
SMPD1-205ENST00000531303 SLC2A3P11169 496 aa19.76■□□□□ 0.75
SMPD1-205ENST00000531303 KCNA5P22460 613 aa19.76■□□□□ 0.75
SMPD1-205ENST00000531303 GGCXP38435 758 aa19.76■□□□□ 0.75
SMPD1-205ENST00000531303 RWDD2BP57060 319 aa19.76■□□□□ 0.75
SMPD1-205ENST00000531303 PPP2R5DQ14738 602 aa19.76■□□□□ 0.75
SMPD1-205ENST00000531303 EFHC2Q5JST6 749 aa19.76■□□□□ 0.75
SMPD1-205ENST00000531303 BRMS1LQ5PSV4 323 aa19.76■□□□□ 0.75
SMPD1-205ENST00000531303 PYROXD2Q8N2H3 581 aa19.76■□□□□ 0.75
SMPD1-205ENST00000531303 KCTD6Q8NC69 237 aa19.76■□□□□ 0.75
SMPD1-205ENST00000531303 RAPGEF5Q92565 580 aa19.76■□□□□ 0.75
SMPD1-205ENST00000531303 ZFRQ96KR1 1074 aaKnown RBP19.76■□□□□ 0.75
SMPD1-205ENST00000531303 RIPOR3Q96MK2 946 aa19.76■□□□□ 0.75
SMPD1-205ENST00000531303 SIK2Q9H0K1 926 aa19.76■□□□□ 0.75
SMPD1-205ENST00000531303 CD207Q9UJ71 328 aa19.76■□□□□ 0.75
SMPD1-205ENST00000531303 HELZP42694 1942 aaKnown RBP19.75■□□□□ 0.75
SMPD1-205ENST00000531303 LRRD1A4D1F6 860 aa19.75■□□□□ 0.75
SMPD1-205ENST00000531303 KCNU1A8MYU2 1149 aa19.75■□□□□ 0.75
SMPD1-205ENST00000531303 PAGE1O75459 146 aa19.75■□□□□ 0.75
SMPD1-205ENST00000531303 STC2O76061 302 aa19.75■□□□□ 0.75
SMPD1-205ENST00000531303 IGLV3-27P01718 113 aa19.75■□□□□ 0.75
SMPD1-205ENST00000531303 CDH6P55285 790 aa19.75■□□□□ 0.75
SMPD1-205ENST00000531303 SLC7A9P82251 487 aa19.75■□□□□ 0.75
SMPD1-205ENST00000531303 ZXDBP98169 803 aa19.75■□□□□ 0.75
SMPD1-205ENST00000531303 NNTQ13423 1086 aa19.75■□□□□ 0.75
SMPD1-205ENST00000531303 KRT81Q14533 505 aa19.75■□□□□ 0.75
SMPD1-205ENST00000531303 PPP6R3Q5H9R7 873 aaPredicted RBP19.75■□□□□ 0.75
SMPD1-205ENST00000531303 AADACL2Q6P093 401 aa19.75■□□□□ 0.75
SMPD1-205ENST00000531303 POLNQ7Z5Q5 900 aa19.75■□□□□ 0.75
SMPD1-205ENST00000531303 CCDC50Q8IVM0 306 aa19.75■□□□□ 0.75
SMPD1-205ENST00000531303 NPAS3Q8IXF0 933 aa19.75■□□□□ 0.75
SMPD1-205ENST00000531303 ST13P5Q8NFI4 369 aaPredicted RBP19.75■□□□□ 0.75
SMPD1-205ENST00000531303 KIF18AQ8NI77 898 aa19.75■□□□□ 0.75
SMPD1-205ENST00000531303 TEKT4Q8WW24 435 aa19.75■□□□□ 0.75
SMPD1-205ENST00000531303 FGF13Q92913 245 aa19.75■□□□□ 0.75
SMPD1-205ENST00000531303 ARHGEF38Q9NXL2 777 aa19.75■□□□□ 0.75
SMPD1-205ENST00000531303 DDX56Q9NY93 547 aaKnown RBP19.75■□□□□ 0.75
SMPD1-205ENST00000531303 CFAP97Q9P2B7 532 aa19.75■□□□□ 0.75
SMPD1-205ENST00000531303 SLC12A6Q9UHW9 1150 aa19.75■□□□□ 0.75
SMPD1-205ENST00000531303 SNX12Q9UMY4 172 aa19.75■□□□□ 0.75
SMPD1-205ENST00000531303 CCL26Q9Y258 94 aa19.75■□□□□ 0.75
SMPD1-205ENST00000531303 PFKLP17858 780 aa19.74■□□□□ 0.75
SMPD1-205ENST00000531303 CORO1AP31146 461 aaKnown RBP19.74■□□□□ 0.75
SMPD1-205ENST00000531303 MTHFRP42898 656 aa19.74■□□□□ 0.75
SMPD1-205ENST00000531303 HARS2P49590 506 aaKnown RBP19.74■□□□□ 0.75
SMPD1-205ENST00000531303 RING1Q06587 406 aa19.74■□□□□ 0.75
SMPD1-205ENST00000531303 DCAF12L1Q5VU92 463 aa19.74■□□□□ 0.75
SMPD1-205ENST00000531303 NUGGCQ68CJ6 796 aa19.74■□□□□ 0.75
SMPD1-205ENST00000531303 DENND1CQ8IV53 801 aa19.74■□□□□ 0.75
SMPD1-205ENST00000531303 ARID3BQ8IVW6 561 aaPredicted RBP19.74■□□□□ 0.75
SMPD1-205ENST00000531303 UNC45BQ8IWX7 931 aa19.74■□□□□ 0.75
SMPD1-205ENST00000531303 KATNAL2Q8IYT4 538 aa19.74■□□□□ 0.75
SMPD1-205ENST00000531303 ATP6V0D2Q8N8Y2 350 aa19.74■□□□□ 0.75
SMPD1-205ENST00000531303 ZSCAN18Q8TBC5 510 aaPredicted RBP19.74■□□□□ 0.75
SMPD1-205ENST00000531303 ADAMTS19Q8TE59 1207 aa19.74■□□□□ 0.75
SMPD1-205ENST00000531303 USP13Q92995 863 aaPredicted RBP19.74■□□□□ 0.75
SMPD1-205ENST00000531303 NTAN1Q96AB6 310 aa19.74■□□□□ 0.75
SMPD1-205ENST00000531303 PLD4Q96BZ4 506 aa19.74■□□□□ 0.75
SMPD1-205ENST00000531303 KCTD15Q96SI1 283 aaPredicted RBP19.74■□□□□ 0.75
SMPD1-205ENST00000531303 OSBPL9Q96SU4 736 aa19.74■□□□□ 0.75
SMPD1-205ENST00000531303 LEFTY2O00292 366 aa19.73■□□□□ 0.75
SMPD1-205ENST00000531303 CEP104O60308 925 aa19.73■□□□□ 0.75
SMPD1-205ENST00000531303 URI1O94763 535 aaPredicted RBP19.73■□□□□ 0.75
SMPD1-205ENST00000531303 ZRANB2O95218 330 aaKnown RBP eCLIP19.73■□□□□ 0.75
SMPD1-205ENST00000531303 PRAMEF12O95522 483 aa19.73■□□□□ 0.75
SMPD1-205ENST00000531303 CD48P09326 243 aa19.73■□□□□ 0.75
SMPD1-205ENST00000531303 PYGMP11217 842 aa19.73■□□□□ 0.75
SMPD1-205ENST00000531303 PAPD7Q5XG87 772 aaKnown RBP19.73■□□□□ 0.75
SMPD1-205ENST00000531303 SMRP1Q8NCR6 262 aa19.73■□□□□ 0.75
SMPD1-205ENST00000531303 SH3RF2Q8TEC5 729 aa19.73■□□□□ 0.75
SMPD1-205ENST00000531303 CALN1Q9BXU9 219 aa19.73■□□□□ 0.75
SMPD1-205ENST00000531303 POMKQ9H5K3 350 aa19.73■□□□□ 0.75
SMPD1-205ENST00000531303 UBE2ZQ9H832 354 aaPredicted RBP19.73■□□□□ 0.75
SMPD1-205ENST00000531303 TDP1Q9NUW8 608 aa19.73■□□□□ 0.75
SMPD1-205ENST00000531303 ARHGAP26Q9UNA1 814 aa19.73■□□□□ 0.75
SMPD1-205ENST00000531303 USP15Q9Y4E8 981 aaPredicted RBP19.73■□□□□ 0.75
SMPD1-205ENST00000531303 DOCK8Q8NF50 2099 aa19.73■□□□□ 0.75
SMPD1-205ENST00000531303 GOLGA6L7A0A1B0GV03 622 aa19.73■□□□□ 0.75
SMPD1-205ENST00000531303 ZNF185O15231 689 aa19.73■□□□□ 0.75
SMPD1-205ENST00000531303 CREB3O43889 395 aa19.73■□□□□ 0.75
SMPD1-205ENST00000531303 KLKB1P03952 638 aa19.73■□□□□ 0.75
SMPD1-205ENST00000531303 KDELR1P24390 212 aa19.73■□□□□ 0.75
SMPD1-205ENST00000531303 L1CAMP32004 1257 aa19.73■□□□□ 0.75
SMPD1-205ENST00000531303 GBP2P32456 591 aaPredicted RBP19.73■□□□□ 0.75
SMPD1-205ENST00000531303 RCOR2Q8IZ40 523 aa19.73■□□□□ 0.75
SMPD1-205ENST00000531303 EXD1Q8NHP7 514 aa19.73■□□□□ 0.75
SMPD1-205ENST00000531303 COG1Q8WTW3 980 aa19.73■□□□□ 0.75
SMPD1-205ENST00000531303 BTN2A3PQ96KV6 586 aa19.73■□□□□ 0.75
SMPD1-205ENST00000531303 PCDH18Q9HCL0 1135 aa19.73■□□□□ 0.75
SMPD1-205ENST00000531303 TMEM51Q9NW97 253 aa19.73■□□□□ 0.75
SMPD1-205ENST00000531303 SH3BP1Q9Y3L3 701 aa19.73■□□□□ 0.75
SMPD1-205ENST00000531303 SAR1BQ9Y6B6 198 aa19.73■□□□□ 0.75
SMPD1-205ENST00000531303 SOBPA7XYQ1 873 aa19.72■□□□□ 0.75
SMPD1-205ENST00000531303 FAM72CH0Y354 149 aa19.72■□□□□ 0.75
SMPD1-205ENST00000531303 SP100P23497 879 aaPredicted RBP19.72■□□□□ 0.75
SMPD1-205ENST00000531303 SLC11A2P49281 568 aa19.72■□□□□ 0.75
SMPD1-205ENST00000531303 AIF1P55008 147 aa19.72■□□□□ 0.75
SMPD1-205ENST00000531303 SCAPQ12770 1279 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms