RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 ABCA7Q8IZY2 2146 aa23.24■■□□□ 1.31
TRAPPC4-210ENST00000531290 PIK3R2O00459 728 aa23.24■■□□□ 1.31
TRAPPC4-210ENST00000531290 LATS1O95835 1130 aa23.24■■□□□ 1.31
TRAPPC4-210ENST00000531290 CSRP1P21291 193 aaKnown RBP23.24■■□□□ 1.31
TRAPPC4-210ENST00000531290 BRD2P25440 801 aaKnown RBP23.24■■□□□ 1.31
TRAPPC4-210ENST00000531290 STX17P56962 302 aa23.24■■□□□ 1.31
TRAPPC4-210ENST00000531290 GCNT1Q02742 428 aa23.24■■□□□ 1.31
TRAPPC4-210ENST00000531290 KCNH2Q12809 1159 aa23.24■■□□□ 1.31
TRAPPC4-210ENST00000531290 PAK1Q13153 545 aa23.24■■□□□ 1.31
TRAPPC4-210ENST00000531290 SYCP2LQ5T4T6 812 aa23.24■■□□□ 1.31
TRAPPC4-210ENST00000531290 METTL3Q86U44 580 aaKnown RBP23.24■■□□□ 1.31
TRAPPC4-210ENST00000531290 TRIM59Q8IWR1 403 aa23.24■■□□□ 1.31
TRAPPC4-210ENST00000531290 RGL4Q8IZJ4 473 aa23.24■■□□□ 1.31
TRAPPC4-210ENST00000531290 HSFY1Q96LI6 401 aa23.24■■□□□ 1.31
TRAPPC4-210ENST00000531290 HSPA12BQ96MM6 686 aa23.24■■□□□ 1.31
TRAPPC4-210ENST00000531290 SRRTQ9BXP5 876 aaKnown RBP23.24■■□□□ 1.31
TRAPPC4-210ENST00000531290 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.24■■□□□ 1.31
TRAPPC4-210ENST00000531290 GIPC1O14908 333 aa23.23■■□□□ 1.31
TRAPPC4-210ENST00000531290 MSI1O43347 362 aaKnown RBP23.23■■□□□ 1.31
TRAPPC4-210ENST00000531290 GADD45BO75293 160 aaPredicted RBP23.23■■□□□ 1.31
TRAPPC4-210ENST00000531290 FGFR1OPO95684 399 aaKnown RBP23.23■■□□□ 1.31
TRAPPC4-210ENST00000531290 AFPP02771 609 aaKnown RBP23.23■■□□□ 1.31
TRAPPC4-210ENST00000531290 SERPINF2P08697 491 aa23.23■■□□□ 1.31
TRAPPC4-210ENST00000531290 CEACAM1P13688 526 aa23.23■■□□□ 1.31
TRAPPC4-210ENST00000531290 CD6P30203 668 aa23.23■■□□□ 1.31
TRAPPC4-210ENST00000531290 ENPP2Q13822 863 aa23.23■■□□□ 1.31
TRAPPC4-210ENST00000531290 ZNF234Q14588 700 aa23.23■■□□□ 1.31
TRAPPC4-210ENST00000531290 SLC41A1Q8IVJ1 513 aa23.23■■□□□ 1.31
TRAPPC4-210ENST00000531290 UNC45BQ8IWX7 931 aa23.23■■□□□ 1.31
TRAPPC4-210ENST00000531290 FOXJ1Q92949 421 aa23.23■■□□□ 1.31
TRAPPC4-210ENST00000531290 ZNF419Q96HQ0 510 aaPredicted RBP23.23■■□□□ 1.31
TRAPPC4-210ENST00000531290 ZSWIM1Q9BR11 485 aa23.23■■□□□ 1.31
TRAPPC4-210ENST00000531290 GTPBP2Q9BX10 602 aaKnown RBP23.23■■□□□ 1.31
TRAPPC4-210ENST00000531290 STOML2Q9UJZ1 356 aa23.23■■□□□ 1.31
TRAPPC4-210ENST00000531290 FBXO21O94952 628 aa23.22■■□□□ 1.31
TRAPPC4-210ENST00000531290 HOXD9P28356 352 aaPredicted RBP23.22■■□□□ 1.31
TRAPPC4-210ENST00000531290 SLC11A2P49281 568 aa23.22■■□□□ 1.31
TRAPPC4-210ENST00000531290 SHC2P98077 582 aa23.22■■□□□ 1.31
TRAPPC4-210ENST00000531290 MSANTD2Q6P1R3 559 aa23.22■■□□□ 1.31
TRAPPC4-210ENST00000531290 SERPINA13PQ6UXR4 307 aa23.22■■□□□ 1.31
TRAPPC4-210ENST00000531290 TMPRSS6Q8IU80 811 aa23.22■■□□□ 1.31
TRAPPC4-210ENST00000531290 ARHGEF19Q8IW93 802 aa23.22■■□□□ 1.31
TRAPPC4-210ENST00000531290 SORCS1Q8WY21 1168 aa23.22■■□□□ 1.31
TRAPPC4-210ENST00000531290 PRCCQ92733 491 aaPredicted RBP23.22■■□□□ 1.31
TRAPPC4-210ENST00000531290 SIPA1Q96FS4 1042 aa23.22■■□□□ 1.31
TRAPPC4-210ENST00000531290 MKRN2Q9H000 416 aaKnown RBP23.22■■□□□ 1.31
TRAPPC4-210ENST00000531290 MIS12Q9H081 205 aa23.22■■□□□ 1.31
TRAPPC4-210ENST00000531290 SLC32A1Q9H598 525 aa23.22■■□□□ 1.31
TRAPPC4-210ENST00000531290 ITM2CQ9NQX7 267 aa23.22■■□□□ 1.31
TRAPPC4-210ENST00000531290 PLA2G4CQ9UP65 541 aa23.22■■□□□ 1.31
TRAPPC4-210ENST00000531290 LAMA1P25391 3075 aa23.22■■□□□ 1.31
TRAPPC4-210ENST00000531290 MYH10P35580 1976 aa23.21■■□□□ 1.31
TRAPPC4-210ENST00000531290 GABBR2O75899 941 aa23.21■■□□□ 1.31
TRAPPC4-210ENST00000531290 CALCAP01258 141 aa23.21■■□□□ 1.31
TRAPPC4-210ENST00000531290 LTFP02788 710 aa23.21■■□□□ 1.31
TRAPPC4-210ENST00000531290 EPHX1P07099 455 aa23.21■■□□□ 1.31
TRAPPC4-210ENST00000531290 KRT5P13647 590 aa23.21■■□□□ 1.31
TRAPPC4-210ENST00000531290 ZNF252P-AS1Q0IIN9 211 aa23.21■■□□□ 1.31
TRAPPC4-210ENST00000531290 WDR45BQ5MNZ6 344 aa23.21■■□□□ 1.31
TRAPPC4-210ENST00000531290 HDDC3Q8N4P3 179 aa23.21■■□□□ 1.31
TRAPPC4-210ENST00000531290 WFIKKN2Q8TEU8 576 aa23.21■■□□□ 1.31
TRAPPC4-210ENST00000531290 TOE1Q96GM8 510 aaKnown RBP23.21■■□□□ 1.31
TRAPPC4-210ENST00000531290 INTS2Q9H0H0 1204 aaKnown RBP23.21■■□□□ 1.31
TRAPPC4-210ENST00000531290 CD93Q9NPY3 652 aa23.21■■□□□ 1.31
TRAPPC4-210ENST00000531290 FSCN3Q9NQT6 498 aa23.21■■□□□ 1.31
TRAPPC4-210ENST00000531290 SYPP08247 313 aa23.2■■□□□ 1.3
TRAPPC4-210ENST00000531290 ACADMP11310 421 aa23.2■■□□□ 1.3
TRAPPC4-210ENST00000531290 NCAM1P13591 858 aa23.2■■□□□ 1.3
TRAPPC4-210ENST00000531290 GNSP15586 552 aa23.2■■□□□ 1.3
TRAPPC4-210ENST00000531290 OXTRP30559 389 aa23.2■■□□□ 1.3
TRAPPC4-210ENST00000531290 MARSP56192 900 aaKnown RBP23.2■■□□□ 1.3
TRAPPC4-210ENST00000531290 TBX4P57082 545 aa23.2■■□□□ 1.3
TRAPPC4-210ENST00000531290 NUGGCQ68CJ6 796 aa23.2■■□□□ 1.3
TRAPPC4-210ENST00000531290 TMEM215Q68D42 235 aa23.2■■□□□ 1.3
TRAPPC4-210ENST00000531290 DEFB124Q8NES8 71 aa23.2■■□□□ 1.3
TRAPPC4-210ENST00000531290 CAPN10Q9HC96 672 aa23.2■■□□□ 1.3
TRAPPC4-210ENST00000531290 ST7Q9NRC1 585 aa23.2■■□□□ 1.3
TRAPPC4-210ENST00000531290 SUSD2Q9UGT4 822 aa23.2■■□□□ 1.3
TRAPPC4-210ENST00000531290 SART1O43290 800 aaKnown RBP23.19■■□□□ 1.3
TRAPPC4-210ENST00000531290 PRKCHP24723 683 aa23.19■■□□□ 1.3
TRAPPC4-210ENST00000531290 HLA-FP30511 346 aa23.19■■□□□ 1.3
TRAPPC4-210ENST00000531290 ST3GAL2Q16842 350 aa23.19■■□□□ 1.3
TRAPPC4-210ENST00000531290 CHST9Q7L1S5 443 aa23.19■■□□□ 1.3
TRAPPC4-210ENST00000531290 CREBRFQ8IUR6 639 aa23.19■■□□□ 1.3
TRAPPC4-210ENST00000531290 CLEC4CQ8WTT0 213 aa23.19■■□□□ 1.3
TRAPPC4-210ENST00000531290 KREMEN1Q96MU8 473 aa23.19■■□□□ 1.3
TRAPPC4-210ENST00000531290 GPR174Q9BXC1 333 aa23.19■■□□□ 1.3
TRAPPC4-210ENST00000531290 IRX2Q9BZI1 471 aaPredicted RBP23.19■■□□□ 1.3
TRAPPC4-210ENST00000531290 UBE2TQ9NPD8 197 aaPredicted RBP23.19■■□□□ 1.3
TRAPPC4-210ENST00000531290 ABCB8Q9NUT2 735 aa23.19■■□□□ 1.3
TRAPPC4-210ENST00000531290 WSB2Q9NYS7 404 aaPredicted RBP23.19■■□□□ 1.3
TRAPPC4-210ENST00000531290 USP36Q9P275 1121 aaKnown RBP23.19■■□□□ 1.3
TRAPPC4-210ENST00000531290 CNOT1A5YKK6 2376 aaKnown RBP23.19■■□□□ 1.3
TRAPPC4-210ENST00000531290 TPRP12270 2363 aaKnown RBP23.19■■□□□ 1.3
TRAPPC4-210ENST00000531290 ACACBO00763 2458 aa23.18■■□□□ 1.3
TRAPPC4-210ENST00000531290 ARHGAP33O14559 1287 aa23.18■■□□□ 1.3
TRAPPC4-210ENST00000531290 IRAK2O43187 625 aa23.18■■□□□ 1.3
TRAPPC4-210ENST00000531290 ACADSBP45954 432 aa23.18■■□□□ 1.3
TRAPPC4-210ENST00000531290 TPMTP51580 245 aa23.18■■□□□ 1.3
TRAPPC4-210ENST00000531290 RING1Q06587 406 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms