RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 CTC1Q2NKJ3 1217 aa17.76■□□□□ 0.43
BRCA2-204ENST00000530893 LRRC8BQ6P9F7 803 aa17.76■□□□□ 0.43
BRCA2-204ENST00000530893 RFWD2Q8NHY2 731 aa17.76■□□□□ 0.43
BRCA2-204ENST00000530893 UTP4Q969X6 686 aaKnown RBP17.76■□□□□ 0.43
BRCA2-204ENST00000530893 STAMBPL1Q96FJ0 436 aa17.76■□□□□ 0.43
BRCA2-204ENST00000530893 C7orf26Q96N11 449 aa17.76■□□□□ 0.43
BRCA2-204ENST00000530893 KANSL3Q9P2N6 904 aa17.76■□□□□ 0.43
BRCA2-204ENST00000530893 DCTN4Q9UJW0 460 aa17.76■□□□□ 0.43
BRCA2-204ENST00000530893 I3L4J1 428 aa17.76■□□□□ 0.43
BRCA2-204ENST00000530893 GABRDO14764 452 aa17.76■□□□□ 0.43
BRCA2-204ENST00000530893 PPP1R12AO14974 1030 aaPredicted RBP17.76■□□□□ 0.43
BRCA2-204ENST00000530893 DLDP09622 509 aaKnown RBP17.76■□□□□ 0.43
BRCA2-204ENST00000530893 ZNF865P0CJ78 1059 aaPredicted RBP17.76■□□□□ 0.43
BRCA2-204ENST00000530893 CSH1P0DML2 217 aa17.76■□□□□ 0.43
BRCA2-204ENST00000530893 CSH2P0DML3 217 aa17.76■□□□□ 0.43
BRCA2-204ENST00000530893 PTPN1P18031 435 aaKnown RBP17.76■□□□□ 0.43
BRCA2-204ENST00000530893 BGNP21810 368 aa17.76■□□□□ 0.43
BRCA2-204ENST00000530893 CDK18Q07002 472 aa17.76■□□□□ 0.43
BRCA2-204ENST00000530893 HIC1Q14526 733 aa17.76■□□□□ 0.43
BRCA2-204ENST00000530893 E2F5Q15329 346 aa17.76■□□□□ 0.43
BRCA2-204ENST00000530893 NBPF20Q3BBV1 942 aa17.76■□□□□ 0.43
BRCA2-204ENST00000530893 DCAF6Q58WW2 860 aa17.76■□□□□ 0.43
BRCA2-204ENST00000530893 STXBP5Q5T5C0 1151 aa17.76■□□□□ 0.43
BRCA2-204ENST00000530893 SMG8Q8ND04 991 aaKnown RBP17.76■□□□□ 0.43
BRCA2-204ENST00000530893 RNF139Q8WU17 664 aa17.76■□□□□ 0.43
BRCA2-204ENST00000530893 SLC2A13Q96QE2 648 aa17.76■□□□□ 0.43
BRCA2-204ENST00000530893 PTPN18Q99952 460 aa17.76■□□□□ 0.43
BRCA2-204ENST00000530893 TLE6Q9H808 572 aa17.76■□□□□ 0.43
BRCA2-204ENST00000530893 GOLGA2P5Q9HBQ8 144 aa17.76■□□□□ 0.43
BRCA2-204ENST00000530893 LRRC4Q9HBW1 653 aa17.76■□□□□ 0.43
BRCA2-204ENST00000530893 NOP53Q9NZM5 478 aaKnown RBP17.76■□□□□ 0.43
BRCA2-204ENST00000530893 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.76■□□□□ 0.43
BRCA2-204ENST00000530893 RAD54BQ9Y620 910 aa17.76■□□□□ 0.43
BRCA2-204ENST00000530893 A0A0G2JND7 137 aa17.75■□□□□ 0.43
BRCA2-204ENST00000530893 C17orf102A2RUQ5 167 aa17.75■□□□□ 0.43
BRCA2-204ENST00000530893 SDR42E2A6NKP2 422 aa17.75■□□□□ 0.43
BRCA2-204ENST00000530893 BIRC5O15392 142 aa17.75■□□□□ 0.43
BRCA2-204ENST00000530893 FBXO21O94952 628 aa17.75■□□□□ 0.43
BRCA2-204ENST00000530893 VAV1P15498 845 aa17.75■□□□□ 0.43
BRCA2-204ENST00000530893 OVGP1Q12889 678 aa17.75■□□□□ 0.43
BRCA2-204ENST00000530893 PAFAH1B3Q15102 231 aaKnown RBP17.75■□□□□ 0.43
BRCA2-204ENST00000530893 OLFML2BQ68BL8 750 aa17.75■□□□□ 0.43
BRCA2-204ENST00000530893 CDHR3Q6ZTQ4 885 aa17.75■□□□□ 0.43
BRCA2-204ENST00000530893 MARK2Q7KZI7 788 aaKnown RBP17.75■□□□□ 0.43
BRCA2-204ENST00000530893 OSTM1Q86WC4 334 aa17.75■□□□□ 0.43
BRCA2-204ENST00000530893 PYROXD2Q8N2H3 581 aa17.75■□□□□ 0.43
BRCA2-204ENST00000530893 COLGALT1Q8NBJ5 622 aa17.75■□□□□ 0.43
BRCA2-204ENST00000530893 ACMSDQ8TDX5 336 aa17.75■□□□□ 0.43
BRCA2-204ENST00000530893 DEPDC1BQ8WUY9 529 aa17.75■□□□□ 0.43
BRCA2-204ENST00000530893 CDKL2Q92772 493 aa17.75■□□□□ 0.43
BRCA2-204ENST00000530893 OXNAD1Q96HP4 312 aaPredicted RBP17.75■□□□□ 0.43
BRCA2-204ENST00000530893 ALG13Q9NP73 1137 aaKnown RBP17.75■□□□□ 0.43
BRCA2-204ENST00000530893 SLC38A7Q9NVC3 462 aa17.75■□□□□ 0.43
BRCA2-204ENST00000530893 SIRPGQ9P1W8 387 aa17.75■□□□□ 0.43
BRCA2-204ENST00000530893 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.75■□□□□ 0.43
BRCA2-204ENST00000530893 HOXC8P31273 242 aa17.74■□□□□ 0.43
BRCA2-204ENST00000530893 PRAMEF19Q5SWL8 479 aa17.74■□□□□ 0.43
BRCA2-204ENST00000530893 FAM91A1Q658Y4 838 aa17.74■□□□□ 0.43
BRCA2-204ENST00000530893 ZNF449Q6P9G9 518 aa17.74■□□□□ 0.43
BRCA2-204ENST00000530893 DENND5BQ6ZUT9 1274 aa17.74■□□□□ 0.43
BRCA2-204ENST00000530893 SIX6OS1Q8N1H7 587 aa17.74■□□□□ 0.43
BRCA2-204ENST00000530893 MPP5Q8N3R9 675 aa17.74■□□□□ 0.43
BRCA2-204ENST00000530893 WNT8BQ93098 351 aa17.74■□□□□ 0.43
BRCA2-204ENST00000530893 SKA1Q96BD8 255 aa17.74■□□□□ 0.43
BRCA2-204ENST00000530893 PPP1R10Q96QC0 940 aaKnown RBP17.74■□□□□ 0.43
BRCA2-204ENST00000530893 TBC1D10AQ9BXI6 508 aa17.74■□□□□ 0.43
BRCA2-204ENST00000530893 MAGEB5Q9BZ81 275 aa17.74■□□□□ 0.43
BRCA2-204ENST00000530893 KCNK13Q9HB14 408 aa17.74■□□□□ 0.43
BRCA2-204ENST00000530893 RNF19AQ9NV58 838 aa17.74■□□□□ 0.43
BRCA2-204ENST00000530893 HEY2Q9UBP5 337 aa17.74■□□□□ 0.43
BRCA2-204ENST00000530893 MCM8Q9UJA3 840 aa17.74■□□□□ 0.43
BRCA2-204ENST00000530893 CYB561D2O14569 222 aa17.74■□□□□ 0.43
BRCA2-204ENST00000530893 MFSD11O43934 449 aa17.74■□□□□ 0.43
BRCA2-204ENST00000530893 HAUS5O94927 633 aa17.74■□□□□ 0.43
BRCA2-204ENST00000530893 OTUD1Q5VV17 481 aaPredicted RBP17.74■□□□□ 0.43
BRCA2-204ENST00000530893 TRMT10BQ6PF06 316 aaKnown RBP17.74■□□□□ 0.43
BRCA2-204ENST00000530893 CLEC20AQ6ZU45 233 aa17.74■□□□□ 0.43
BRCA2-204ENST00000530893 PDZD4Q76G19 769 aaPredicted RBP17.74■□□□□ 0.43
BRCA2-204ENST00000530893 LRRN4Q8WUT4 740 aa17.74■□□□□ 0.43
BRCA2-204ENST00000530893 NTAN1Q96AB6 310 aa17.74■□□□□ 0.43
BRCA2-204ENST00000530893 E2F7Q96AV8 911 aa17.74■□□□□ 0.43
BRCA2-204ENST00000530893 P2RY11Q96G91 374 aa17.74■□□□□ 0.43
BRCA2-204ENST00000530893 LGMNQ99538 433 aa17.74■□□□□ 0.43
BRCA2-204ENST00000530893 TMEM120AQ9BXJ8 343 aa17.74■□□□□ 0.43
BRCA2-204ENST00000530893 AP5M1Q9H0R1 490 aa17.74■□□□□ 0.43
BRCA2-204ENST00000530893 YY1AP1Q9H869 796 aa17.74■□□□□ 0.43
BRCA2-204ENST00000530893 KCNK4Q9NYG8 393 aa17.74■□□□□ 0.43
BRCA2-204ENST00000530893 TSC2P49815 1807 aa17.74■□□□□ 0.43
BRCA2-204ENST00000530893 M0QYT0 321 aa17.73■□□□□ 0.43
BRCA2-204ENST00000530893 RNF103O00237 685 aa17.73■□□□□ 0.43
BRCA2-204ENST00000530893 CCDC22O60826 627 aa17.73■□□□□ 0.43
BRCA2-204ENST00000530893 CBX6O95503 412 aa17.73■□□□□ 0.43
BRCA2-204ENST00000530893 ATP5BP06576 529 aaKnown RBP17.73■□□□□ 0.43
BRCA2-204ENST00000530893 FAM200BP0CF97 657 aa17.73■□□□□ 0.43
BRCA2-204ENST00000530893 PGAM1P18669 254 aa17.73■□□□□ 0.43
BRCA2-204ENST00000530893 MAP2K2P36507 400 aa17.73■□□□□ 0.43
BRCA2-204ENST00000530893 KRT72Q14CN4 511 aa17.73■□□□□ 0.43
BRCA2-204ENST00000530893 TWF2Q6IBS0 349 aaKnown RBP17.73■□□□□ 0.43
BRCA2-204ENST00000530893 TAF2Q6P1X5 1199 aa17.73■□□□□ 0.43
BRCA2-204ENST00000530893 KYAT3Q6YP21 454 aaKnown RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms