RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 SPOCD1Q6ZMY3 1216 aa8.82□□□□□ -1
NEDD8-MDP1-201ENST00000530579 CYP4V2Q6ZWL3 525 aaPredicted RBP8.82□□□□□ -1
NEDD8-MDP1-201ENST00000530579 RFX6Q8HWS3 928 aa8.82□□□□□ -1
NEDD8-MDP1-201ENST00000530579 PYROXD2Q8N2H3 581 aa8.82□□□□□ -1
NEDD8-MDP1-201ENST00000530579 PPM1EQ8WY54 764 aa8.82□□□□□ -1
NEDD8-MDP1-201ENST00000530579 MYLIPQ8WY64 445 aa8.82□□□□□ -1
NEDD8-MDP1-201ENST00000530579 PLD4Q96BZ4 506 aa8.82□□□□□ -1
NEDD8-MDP1-201ENST00000530579 SLC39A13Q96H72 371 aa8.82□□□□□ -1
NEDD8-MDP1-201ENST00000530579 SLC22A12Q96S37 553 aa8.82□□□□□ -1
NEDD8-MDP1-201ENST00000530579 HAPLN3Q96S86 360 aa8.82□□□□□ -1
NEDD8-MDP1-201ENST00000530579 KCTD15Q96SI1 283 aaPredicted RBP8.82□□□□□ -1
NEDD8-MDP1-201ENST00000530579 SMG9Q9H0W8 520 aaKnown RBP8.82□□□□□ -1
NEDD8-MDP1-201ENST00000530579 CARD9Q9H257 536 aa8.82□□□□□ -1
NEDD8-MDP1-201ENST00000530579 ADAM7Q9H2U9 754 aa8.82□□□□□ -1
NEDD8-MDP1-201ENST00000530579 PCDH18Q9HCL0 1135 aa8.82□□□□□ -1
NEDD8-MDP1-201ENST00000530579 ANLNQ9NQW6 1124 aa8.82□□□□□ -1
NEDD8-MDP1-201ENST00000530579 ARHGEF38Q9NXL2 777 aa8.82□□□□□ -1
NEDD8-MDP1-201ENST00000530579 CLEC1BQ9P126 229 aa8.82□□□□□ -1
NEDD8-MDP1-201ENST00000530579 STIM2Q9P246 746 aa8.82□□□□□ -1
NEDD8-MDP1-201ENST00000530579 SNX10Q9Y5X0 201 aa8.82□□□□□ -1
NEDD8-MDP1-201ENST00000530579 CPQQ9Y646 472 aa8.82□□□□□ -1
NEDD8-MDP1-201ENST00000530579 GBF1Q92538 1859 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 SOBPA7XYQ1 873 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 H3BRJ5 948 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 EEF2KO00418 725 aaKnown RBP8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 CES2O00748 559 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 NRG2O14511 850 aaPredicted RBP8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 STC2O76061 302 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 FGGP02679 453 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 CD48P09326 243 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 KRT10P13645 584 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 CEBPBP17676 345 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 CORO1AP31146 461 aaKnown RBP8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 SLC11A2P49281 568 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 COPS2P61201 443 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 SLC7A9P82251 487 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 ITIH3Q06033 890 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 DLX2Q07687 328 aaPredicted RBP8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 SCAPQ12770 1279 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 MMRN1Q13201 1228 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 MTA1Q13330 715 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 DPYSL3Q14195 570 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 CBX2Q14781 532 aaPredicted RBP8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 WHAMMP3Q1A5X7 153 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 ANKRD20A8PQ5CZ79 823 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 LRRC31Q6UY01 552 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 Q7L0L9 218 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 ADAT2Q7Z6V5 191 aaKnown RBP8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 SLC13A5Q86YT5 568 aaPredicted RBP8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 CREG2Q8IUH2 290 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 DENND1CQ8IV53 801 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 CMTM8Q8IZV2 173 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 PABPC5Q96DU9 382 aaKnown RBP8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 BTN2A3PQ96KV6 586 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 RIPOR3Q96MK2 946 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 ZSWIM3Q96MP5 696 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 NAP1L3Q99457 506 aaPredicted RBP8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 CDX2Q99626 313 aaPredicted RBP8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 EPAS1Q99814 870 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 OSBPL8Q9BZF1 889 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 DCLK3Q9C098 648 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 OSBPL2Q9H1P3 480 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 SMARCAL1Q9NZC9 954 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 CFAP97Q9P2B7 532 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 RNF14Q9UBS8 474 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 OR12D3Q9UGF7 316 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 ZMYM5Q9UJ78 669 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 CDH22Q9UJ99 828 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 LSM7Q9UK45 103 aaKnown RBP8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 SH3BP1Q9Y3L3 701 aa8.81□□□□□ -1
NEDD8-MDP1-201ENST00000530579 CLUHO75153 1309 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 GOLGA6L7A0A1B0GV03 622 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 C3orf70A6NLC5 250 aaPredicted RBP8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 FAM72CH0Y354 149 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 I6L893 689 aaPredicted RBP8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 PGRMC1O00264 195 aaKnown RBP8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 LEFTY2O00292 366 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 KRIT1O00522 736 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 SCAMP3O14828 347 aaKnown RBP8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 ACSL4O60488 711 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 TBX10O75333 385 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 TJP3O95049 919 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 PAPLNO95428 1278 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 OLFM2O95897 454 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 IGLV3-27P01718 113 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 FOSL2P15408 326 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 GOT1P17174 413 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 GGCXP38435 758 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 CDKN2BP42772 138 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 MTHFRP42898 656 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 ARSEP51690 589 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 MLLT6P55198 1093 aaPredicted RBP8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 TPI1P60174 286 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 DYNLT1P63172 113 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 CKAP4Q07065 602 aaKnown RBP8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 TFDP2Q14188 446 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 DPYSL2Q16555 572 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 CTC1Q2NKJ3 1217 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 TFDP3Q5H9I0 405 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms