RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 C2orf42Q9NWW7 574 aa13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 RRN3Q9NYV6 651 aa13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 TMEM59LQ9UK28 342 aa13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 GOLGA6L7A0A1B0GV03 622 aa13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 A0A1W2PQJ5 194 aa13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 TBC1D3BA6NDS4 549 aa13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 GOLGA8SH3BPF8 625 aa13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 PAPSS2O95340 614 aaPredicted RBP13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 TPM3P06753 285 aa13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 TNFAIP3P21580 790 aa13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 PRKCIP41743 596 aa13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 NSFP46459 744 aaKnown RBP13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 SATB1Q01826 763 aa13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 PTP4A2Q12974 167 aa13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 ASIC2Q16515 512 aa13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 MPPE1Q53F39 396 aa13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 FAM133BQ5BKY9 247 aaKnown RBP13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 ZC3H12AQ5D1E8 599 aaKnown RBP13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 E4F1Q66K89 784 aaPredicted RBP13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 GRAMD4Q6IC98 578 aa13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 NUDT18Q6ZVK8 323 aa13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 ARCQ7LC44 396 aa13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 PHF13Q86YI8 300 aaPredicted RBP13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 SFTPA1Q8IWL2 248 aa13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 OLIG1Q8TAK6 271 aa13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 USP33Q8TEY7 942 aa13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 DDI1Q8WTU0 396 aa13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 NT5C3BQ969T7 300 aa13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 IQCDQ96DY2 449 aa13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 TMA16Q96EY4 203 aaKnown RBP13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 NPY6RQ99463 290 aa13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 C11orf70Q9BRQ4 267 aa13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 FAM204AQ9H8W3 233 aa13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 SEPT11Q9NVA2 429 aaKnown RBP13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 DDIT4Q9NX09 232 aa13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 ADAM22Q9P0K1 906 aa13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 CAPN11Q9UMQ6 739 aa13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 KIAA1549LQ6ZVL6 1849 aa13.17□□□□□ -0.3
CCDC90B-216ENST00000529856 ANTXRLA6NF34 631 aa13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 KCNU1A8MYU2 1149 aa13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 M0QYT0 321 aa13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 TSPAN3O60637 253 aa13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 APOEP02649 317 aa13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 SLC2A3P11169 496 aa13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 CHRM1P11229 460 aaPredicted RBP13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 TDGF1P13385 188 aa13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 SLC6A4P31645 630 aa13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 DGKGP49619 791 aa13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 SEC13P55735 322 aa13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 MRPS21P82921 87 aaKnown RBP13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 ZBED6P86452 979 aa13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 PPP2R5DQ14738 602 aa13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 C2orf27AQ580R0 203 aa13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 EMC10Q5UCC4 262 aa13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 PIK3R6Q5UE93 754 aa13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 NADSYN1Q6IA69 706 aa13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 ACAD10Q6JQN1 1059 aa13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 RFWD3Q6PCD5 774 aa13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 TSSK4Q6SA08 328 aa13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 ZNF571Q7Z3V5 609 aaPredicted RBP13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 ATP6V0D2Q8N8Y2 350 aa13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 TERB1Q8NA31 727 aa13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 SPDYE1Q8NFV5 336 aaPredicted RBP13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 RPLP0P6Q8NHW5 317 aa13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 CPLX3Q8WVH0 158 aa13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 SYN2Q92777 582 aaPredicted RBP13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 NELL1Q92832 810 aa13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 PGAP3Q96FM1 320 aaPredicted RBP13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 BTN2A3PQ96KV6 586 aa13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 DDX50Q9BQ39 737 aaKnown RBP13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 SLC2A11Q9BYW1 496 aa13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 NUCKS1Q9H1E3 243 aaKnown RBP13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 HAUS4Q9H6D7 363 aa13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 SLC12A6Q9UHW9 1150 aa13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 STAP1Q9ULZ2 295 aa13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 SLC27A6Q9Y2P4 619 aa13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 CACNA1HO95180 2353 aa13.16□□□□□ -0.3
CCDC90B-216ENST00000529856 ITIH6Q6UXX5 1313 aa13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 SYNJ2BP-COX16A0A087WUM0 186 aa13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 K7ESF4 209 aa13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 CBFA2T2O43439 604 aa13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 MOCS2O96007 188 aaPredicted RBP13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 F9P00740 461 aa13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 CALB1P05937 261 aa13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 SKILP12757 684 aa13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 TFE3P19532 575 aaPredicted RBP13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 HOXD9P28356 352 aaPredicted RBP13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 CCR1P32246 355 aa13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 FLT3P36888 993 aa13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 KIR2DL1P43626 348 aaPredicted RBP13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 GSCP56915 257 aaPredicted RBP13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 KLHL30Q0D2K2 578 aa13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 NME3Q13232 169 aa13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 SLC25A52Q3SY17 297 aa13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 MPP7Q5T2T1 576 aa13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 OTUD1Q5VV17 481 aaPredicted RBP13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 TRNP1Q6NT89 227 aa13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 SYT13Q7L8C5 426 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms