RNA–Protein interactions for RNA: ENST00000529565.1

CASP4-207, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 4,745 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-207ENST00000529565 RNF157Q96PX1 679 aa4.82□□□□□ -1.64
CASP4-207ENST00000529565 MRPL45Q9BRJ2 306 aaKnown RBP4.82□□□□□ -1.64
CASP4-207ENST00000529565 TSEN34Q9BSV6 310 aaKnown RBP4.82□□□□□ -1.64
CASP4-207ENST00000529565 UPF3AQ9H1J1 476 aaKnown RBP4.82□□□□□ -1.64
CASP4-207ENST00000529565 TASP1Q9H6P5 420 aa4.82□□□□□ -1.64
CASP4-207ENST00000529565 TMBIM4Q9HC24 238 aa4.82□□□□□ -1.64
CASP4-207ENST00000529565 MLXIPLQ9NP71 852 aa4.82□□□□□ -1.64
CASP4-207ENST00000529565 ACP6Q9NPH0 428 aa4.82□□□□□ -1.64
CASP4-207ENST00000529565 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.82□□□□□ -1.64
CASP4-207ENST00000529565 PCMTD2Q9NV79 361 aa4.82□□□□□ -1.64
CASP4-207ENST00000529565 THG1LQ9NWX6 298 aaKnown RBP4.82□□□□□ -1.64
CASP4-207ENST00000529565 RCOR3Q9P2K3 495 aaPredicted RBP4.82□□□□□ -1.64
CASP4-207ENST00000529565 TUBGCP4Q9UGJ1 667 aa4.82□□□□□ -1.64
CASP4-207ENST00000529565 DCDC2Q9UHG0 476 aa4.82□□□□□ -1.64
CASP4-207ENST00000529565 GTF2IRD1Q9UHL9 959 aa4.82□□□□□ -1.64
CASP4-207ENST00000529565 MOSPD1Q9UJG1 213 aa4.82□□□□□ -1.64
CASP4-207ENST00000529565 DNMT3LQ9UJW3 386 aa4.82□□□□□ -1.64
CASP4-207ENST00000529565 MYH14Q7Z406 1995 aaKnown RBP4.81□□□□□ -1.64
CASP4-207ENST00000529565 CCDC195A0A1B0GUA6 201 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.81□□□□□ -1.64
CASP4-207ENST00000529565 RCCD1A6NED2 376 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 TCP11X1B4DZS4 312 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 NVLO15381 856 aaKnown RBP4.81□□□□□ -1.64
CASP4-207ENST00000529565 DIAPH2O60879 1101 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 ARIH2O95376 493 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 BAG2O95816 211 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 F2P00734 622 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 ADH1AP07327 375 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 SLC10A3P09131 477 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 COL6A1P12109 1028 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 CKBP12277 381 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 HOXB8P17481 243 aaPredicted RBP4.81□□□□□ -1.64
CASP4-207ENST00000529565 MAP4P27816 1152 aaKnown RBP4.81□□□□□ -1.64
CASP4-207ENST00000529565 HTR7P34969 479 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 MAP2K2P36507 400 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 CCL23P55773 120 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 PTP4A2Q12974 167 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 PSMD5Q16401 504 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 PARP6Q2NL67 630 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 SYTL3Q4VX76 610 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 PPP1R26Q5T8A7 1209 aaPredicted RBP4.81□□□□□ -1.64
CASP4-207ENST00000529565 AGAP9Q5VTM2 703 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 KCNT2Q6UVM3 1135 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 DLK2Q6UY11 383 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 RNF135Q8IUD6 432 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 PSTKQ8IV42 348 aaKnown RBP4.81□□□□□ -1.64
CASP4-207ENST00000529565 C4orf33Q8N1A6 199 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 SH2D3CQ8N5H7 860 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 CXorf38Q8TB03 319 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 GIPC2Q8TF65 315 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 EMID1Q96A84 441 aaPredicted RBP4.81□□□□□ -1.64
CASP4-207ENST00000529565 ATXN7L3BQ96GX2 97 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 SRPK1Q96SB4 655 aaKnown RBP4.81□□□□□ -1.64
CASP4-207ENST00000529565 TTPALQ9BTX7 342 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 DDX23Q9BUQ8 820 aaKnown RBP4.81□□□□□ -1.64
CASP4-207ENST00000529565 SNRNP25Q9BV90 132 aaKnown RBP4.81□□□□□ -1.64
CASP4-207ENST00000529565 HSD3B7Q9H2F3 369 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 IKZF4Q9H2S9 585 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 CRLS1Q9UJA2 301 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 DNPEPQ9ULA0 475 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 REXO2Q9Y3B8 237 aaKnown RBP4.81□□□□□ -1.64
CASP4-207ENST00000529565 CHD4Q14839 1912 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 CFAP73A6NFT4 308 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 GOLGA8RI6L899 631 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 RNF103O00237 685 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 CHADO15335 359 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 GYG2O15488 501 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 MTA2O94776 668 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 FGF19O95750 216 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 ITGAVP06756 1048 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 WARSP23381 471 aaKnown RBP4.81□□□□□ -1.64
CASP4-207ENST00000529565 OR1E1P30953 314 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 RPL21P46778 160 aaKnown RBP4.81□□□□□ -1.64
CASP4-207ENST00000529565 SERPINB4P48594 390 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 GTF2A1P52655 376 aaPredicted RBP4.81□□□□□ -1.64
CASP4-207ENST00000529565 ACLYP53396 1101 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 XRCC4Q13426 336 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 SLC10A6Q3KNW5 377 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 SPANXN3Q5MJ09 141 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 METTL3Q86U44 580 aaKnown RBP4.81□□□□□ -1.64
CASP4-207ENST00000529565 ZCCHC9Q8N567 271 aaKnown RBP4.81□□□□□ -1.64
CASP4-207ENST00000529565 TBC1D19Q8N5T2 526 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 NPLOC4Q8TAT6 608 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 MYCBPAPQ8TBZ2 947 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 TMA16Q96EY4 203 aaKnown RBP4.81□□□□□ -1.64
CASP4-207ENST00000529565 PCDHB18PQ96TA0 734 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 PRMT1Q99873 361 aaKnown RBP4.81□□□□□ -1.64
CASP4-207ENST00000529565 ACBD6Q9BR61 282 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 CENPKQ9BS16 269 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 FICDQ9BVA6 458 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 ATXN3LQ9H3M9 355 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 NT5MQ9NPB1 228 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 SPG21Q9NZD8 308 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 HACD3Q9P035 362 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.81□□□□□ -1.64
CASP4-207ENST00000529565 RGS17Q9UGC6 210 aaPredicted RBP4.81□□□□□ -1.64
CASP4-207ENST00000529565 OR12D3Q9UGF7 316 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 SEPT3Q9UH03 358 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 ANGPTL2Q9UKU9 493 aa4.81□□□□□ -1.64
CASP4-207ENST00000529565 VANGL2Q9ULK5 521 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms