RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 MC2RQ01718 297 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 RNASELQ05823 741 aaKnown RBP3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 PRPF4BQ13523 1007 aaKnown RBP3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 ZNF568Q3ZCX4 644 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 ANKRD40Q6AI12 368 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 TBC1D3GQ6DHY5 549 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 TBC1D3CQ6IPX1 549 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 FAM47EQ6ZV65 393 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 RALYLQ86SE5 291 aaKnown RBP3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 ZSWIM9Q86XI8 627 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 SYT12Q8IV01 421 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 TBC1D3Q8IZP1 549 aaPredicted RBP3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 SCML4Q8N228 414 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 Q8NA96 180 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 TNIP2Q8NFZ5 429 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 ATRIPQ8WXE1 791 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 ST8SIA2Q92186 375 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 NCSTNQ92542 709 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 NPIPB3Q92617 1050 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 JAKMIP2Q96AA8 810 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 MBD6Q96DN6 1003 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 KIF1BPQ96EK5 621 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 SAAL1Q96ER3 474 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 RNFT2Q96EX2 444 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 FAR2Q96K12 515 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 EYA3Q99504 573 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 NPAS1Q99742 590 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 MRPL9Q9BYD2 267 aaKnown RBP3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 EDEM3Q9BZQ6 932 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 REXO4Q9GZR2 422 aaKnown RBP3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 SMARCAD1Q9H4L7 1026 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 MROH8Q9H579 483 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 PDE11AQ9HCR9 933 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 GCM1Q9NP62 436 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 ATP8A2Q9NTI2 1148 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 CWC25Q9NXE8 425 aaPredicted RBP3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 ALKBH4Q9NXW9 302 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 HECAQ9UBI9 543 aaPredicted RBP3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 NKX1-2Q9UD57 310 aaPredicted RBP3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 SLCO3A1Q9UIG8 710 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 ACAD8Q9UKU7 415 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 RAB21Q9UL25 225 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 TRPC5Q9UL62 973 aaPredicted RBP3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 SNX14Q9Y5W7 946 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 SNX5Q9Y5X3 404 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 KCNE2Q9Y6J6 123 aa3.84□□□□□ -1.79
AMBRA1-208ENST00000529558 MYO1GB0I1T2 1018 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 F5H697 171 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 SYN3O14994 580 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 TBCAO75347 108 aaKnown RBP3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 SEC14L2O76054 403 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 MTA2O94776 668 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 CSPG5O95196 566 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 EIF2S1P05198 315 aaKnown RBP3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 TMEM225BP0DP42 221 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 PEPDP12955 493 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 COX7A2P14406 83 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 GNAT2P19087 354 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 TBXAS1P24557 533 aaPredicted RBP3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 GCH1P30793 250 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 ABCD1P33897 745 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 GRK5P34947 590 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 NDUFV1P49821 464 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 ANXA11P50995 505 aaKnown RBP3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 DGKQP52824 942 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 FOXL2P58012 376 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 EIF4A1P60842 406 aaKnown RBP3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 AIMP1Q12904 312 aaKnown RBP3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 AIMP2Q13155 320 aaKnown RBP3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 DYRK1AQ13627 763 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 HLXQ14774 488 aaPredicted RBP3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 NAA25Q14CX7 972 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 MED22Q15528 200 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 LY6KQ17RY6 165 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 AASDHQ4L235 1098 aaPredicted RBP3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 BMP2KLQ5H9B9 411 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 C1orf141Q5JVX7 400 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 UBAP2Q5T6F2 1119 aaKnown RBP3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 FAM102AQ5T9C2 384 aaPredicted RBP3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 GARNL3Q5VVW2 1013 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 NCEH1Q6PIU2 408 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 IL27RAQ6UWB1 636 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 IZUMO1Q8IYV9 350 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 ADGRF2Q8IZF7 708 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 SYNE4Q8N205 404 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 FAM109AQ8N4B1 249 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 FRMD1Q8N878 549 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 AVL9Q8NBF6 648 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 OSCP1Q8WVF1 389 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 C5orf34Q96MH7 638 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 PIP5K1AQ99755 562 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 LBHD1Q9BQE6 289 aaPredicted RBP3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 CLSTN3Q9BQT9 956 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 DESI2Q9BSY9 194 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 RABEP2Q9H5N1 569 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 GRPEL1Q9HAV7 217 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 MSL2Q9HCI7 577 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 TRIM36Q9NQ86 728 aa3.83□□□□□ -1.8
AMBRA1-208ENST00000529558 EHD2Q9NZN4 543 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms