RNA–Protein interactions for RNA: ENST00000527959.1

BBS1-213, Transcript of Bardet-Biedl syndrome 1, human

TSL 2

Gene BBS1, Length 734 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-213	ENST00000527959	DNASE2B	Q8WZ79	361 aa		13.73	□□□□□ -0.21
BBS1-213	ENST00000527959	SMARCE1	Q969G3	411 aa		13.73	□□□□□ -0.21
BBS1-213	ENST00000527959	DHTKD1	Q96HY7	919 aa	Predicted RBP	13.73	□□□□□ -0.21
BBS1-213	ENST00000527959	IRX2	Q9BZI1	471 aa	Predicted RBP	13.73	□□□□□ -0.21
BBS1-213	ENST00000527959	SLC6A17	Q9H1V8	727 aa		13.73	□□□□□ -0.21
BBS1-213	ENST00000527959	LRRC4	Q9HBW1	653 aa		13.73	□□□□□ -0.21
BBS1-213	ENST00000527959	CNGB3	Q9NQW8	809 aa		13.73	□□□□□ -0.21
BBS1-213	ENST00000527959	ABCC13	Q9NSE7	274 aa		13.73	□□□□□ -0.21
BBS1-213	ENST00000527959	DNAAF2	Q9NVR5	837 aa	Known RBP	13.73	□□□□□ -0.21
BBS1-213	ENST00000527959	WSB2	Q9NYS7	404 aa	Predicted RBP	13.73	□□□□□ -0.21
BBS1-213	ENST00000527959	HOOK1	Q9UJC3	728 aa	Known RBP	13.73	□□□□□ -0.21
BBS1-213	ENST00000527959	CLEC4E	Q9ULY5	219 aa		13.73	□□□□□ -0.21
BBS1-213	ENST00000527959	TRIM49B	A6NDI0	452 aa		13.72	□□□□□ -0.21
BBS1-213	ENST00000527959	YJEFN3	A6XGL0	299 aa		13.72	□□□□□ -0.21
BBS1-213	ENST00000527959		E7ENQ6	273 aa		13.72	□□□□□ -0.21
BBS1-213	ENST00000527959	SYNCRIP	O60506	623 aa	Known RBP	13.72	□□□□□ -0.21
BBS1-213	ENST00000527959	OPHN1	O60890	802 aa		13.72	□□□□□ -0.21
BBS1-213	ENST00000527959	GJB3	O75712	270 aa		13.72	□□□□□ -0.21
BBS1-213	ENST00000527959	NCAM1	P13591	858 aa		13.72	□□□□□ -0.21
BBS1-213	ENST00000527959	HOXD9	P28356	352 aa	Predicted RBP	13.72	□□□□□ -0.21
BBS1-213	ENST00000527959	OXTR	P30559	389 aa		13.72	□□□□□ -0.21
BBS1-213	ENST00000527959	FMO5	P49326	533 aa		13.72	□□□□□ -0.21
BBS1-213	ENST00000527959	TPMT	P51580	245 aa		13.72	□□□□□ -0.21
BBS1-213	ENST00000527959	ADIG	Q0VDE8	80 aa		13.72	□□□□□ -0.21
BBS1-213	ENST00000527959	FOXC1	Q12948	553 aa		13.72	□□□□□ -0.21
BBS1-213	ENST00000527959	HNRNPD	Q14103	355 aa	Known RBP	13.72	□□□□□ -0.21
BBS1-213	ENST00000527959	WDR45B	Q5MNZ6	344 aa		13.72	□□□□□ -0.21
BBS1-213	ENST00000527959	TMEM215	Q68D42	235 aa		13.72	□□□□□ -0.21
BBS1-213	ENST00000527959	MSANTD2	Q6P1R3	559 aa		13.72	□□□□□ -0.21
BBS1-213	ENST00000527959	FOXR2	Q6PJQ5	311 aa		13.72	□□□□□ -0.21
BBS1-213	ENST00000527959	KIAA1324	Q6UXG2	1013 aa	Known RBP	13.72	□□□□□ -0.21
BBS1-213	ENST00000527959	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	13.72	□□□□□ -0.21
BBS1-213	ENST00000527959	HDDC3	Q8N4P3	179 aa		13.72	□□□□□ -0.21
BBS1-213	ENST00000527959	MINDY1	Q8N5J2	469 aa		13.72	□□□□□ -0.21
BBS1-213	ENST00000527959	RNF139	Q8WU17	664 aa		13.72	□□□□□ -0.21
BBS1-213	ENST00000527959	SLC35F5	Q8WV83	523 aa		13.72	□□□□□ -0.21
BBS1-213	ENST00000527959	NDRG1	Q92597	394 aa	Known RBP	13.72	□□□□□ -0.21
BBS1-213	ENST00000527959	ERLEC1	Q96DZ1	483 aa		13.72	□□□□□ -0.21
BBS1-213	ENST00000527959	CEP63	Q96MT8	703 aa		13.72	□□□□□ -0.21
BBS1-213	ENST00000527959	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.72	□□□□□ -0.21
BBS1-213	ENST00000527959	CD93	Q9NPY3	652 aa		13.72	□□□□□ -0.21
BBS1-213	ENST00000527959	IGF2R	P11717	2491 aa		13.72	□□□□□ -0.21
BBS1-213	ENST00000527959	ZFHX4	Q86UP3	3567 aa		13.72	□□□□□ -0.21
BBS1-213	ENST00000527959	ASPM	Q8IZT6	3477 aa		13.71	□□□□□ -0.21
BBS1-213	ENST00000527959	KCNJ18	B7U540	433 aa		13.71	□□□□□ -0.21
BBS1-213	ENST00000527959	PSMA7	O14818	248 aa		13.71	□□□□□ -0.21
BBS1-213	ENST00000527959	P4HA2	O15460	535 aa		13.71	□□□□□ -0.21
BBS1-213	ENST00000527959	GABBR2	O75899	941 aa		13.71	□□□□□ -0.21
BBS1-213	ENST00000527959	CD59	P13987	128 aa		13.71	□□□□□ -0.21
BBS1-213	ENST00000527959	CD19	P15391	556 aa		13.71	□□□□□ -0.21
BBS1-213	ENST00000527959	GNS	P15586	552 aa		13.71	□□□□□ -0.21
BBS1-213	ENST00000527959	PPP1R2	P41236	205 aa		13.71	□□□□□ -0.21
BBS1-213	ENST00000527959	COPA	P53621	1224 aa		13.71	□□□□□ -0.21
BBS1-213	ENST00000527959	DAOA	P59103	153 aa		13.71	□□□□□ -0.21
BBS1-213	ENST00000527959	STIM1	Q13586	685 aa		13.71	□□□□□ -0.21
BBS1-213	ENST00000527959	STIL	Q15468	1287 aa		13.71	□□□□□ -0.21
BBS1-213	ENST00000527959	CNGA2	Q16280	664 aa		13.71	□□□□□ -0.21
BBS1-213	ENST00000527959	MPP7	Q5T2T1	576 aa		13.71	□□□□□ -0.21
BBS1-213	ENST00000527959	UNQ6494/PRO21346	Q6UXR6	183 aa		13.71	□□□□□ -0.21
BBS1-213	ENST00000527959	TMPRSS6	Q8IU80	811 aa		13.71	□□□□□ -0.21
BBS1-213	ENST00000527959	SIX6OS1	Q8N1H7	587 aa		13.71	□□□□□ -0.21
BBS1-213	ENST00000527959	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
BBS1-213	ENST00000527959	KDF1	Q8NAX2	398 aa	Predicted RBP	13.71	□□□□□ -0.21
BBS1-213	ENST00000527959	LMO3	Q8TAP4	145 aa		13.71	□□□□□ -0.21
BBS1-213	ENST00000527959	UBA3	Q8TBC4	463 aa		13.71	□□□□□ -0.21
BBS1-213	ENST00000527959	IRGQ	Q8WZA9	623 aa		13.71	□□□□□ -0.21
BBS1-213	ENST00000527959	TFAP2B	Q92481	460 aa		13.71	□□□□□ -0.21
BBS1-213	ENST00000527959	TMA16	Q96EY4	203 aa	Known RBP	13.71	□□□□□ -0.21
BBS1-213	ENST00000527959	SIPA1	Q96FS4	1042 aa		13.71	□□□□□ -0.21
BBS1-213	ENST00000527959	TOE1	Q96GM8	510 aa	Known RBP	13.71	□□□□□ -0.21
BBS1-213	ENST00000527959	SCNM1	Q9BWG6	230 aa		13.71	□□□□□ -0.21
BBS1-213	ENST00000527959	GTPBP2	Q9BX10	602 aa	Known RBP	13.71	□□□□□ -0.21
BBS1-213	ENST00000527959	ADAM33	Q9BZ11	813 aa		13.71	□□□□□ -0.21
BBS1-213	ENST00000527959	ZDHHC5	Q9C0B5	715 aa		13.71	□□□□□ -0.21
BBS1-213	ENST00000527959	FSCN3	Q9NQT6	498 aa		13.71	□□□□□ -0.21
BBS1-213	ENST00000527959	DMXL2	Q8TDJ6	3036 aa		13.7	□□□□□ -0.22
BBS1-213	ENST00000527959	TMEM8B	A6NDV4	472 aa		13.7	□□□□□ -0.22
BBS1-213	ENST00000527959	IGLV3-27	P01718	113 aa		13.7	□□□□□ -0.22
BBS1-213	ENST00000527959	HLA-F	P30511	346 aa		13.7	□□□□□ -0.22
BBS1-213	ENST00000527959	RING1	Q06587	406 aa		13.7	□□□□□ -0.22
BBS1-213	ENST00000527959	CAMK2G	Q13555	558 aa	Predicted RBP	13.7	□□□□□ -0.22
BBS1-213	ENST00000527959	PLEKHG6	Q3KR16	790 aa		13.7	□□□□□ -0.22
BBS1-213	ENST00000527959	PMF1	Q6P1K2	205 aa		13.7	□□□□□ -0.22
BBS1-213	ENST00000527959	TMEM270	Q6UE05	265 aa		13.7	□□□□□ -0.22
BBS1-213	ENST00000527959	SERPINA13P	Q6UXR4	307 aa		13.7	□□□□□ -0.22
BBS1-213	ENST00000527959	RGL4	Q8IZJ4	473 aa		13.7	□□□□□ -0.22
BBS1-213	ENST00000527959	WFIKKN2	Q8TEU8	576 aa		13.7	□□□□□ -0.22
BBS1-213	ENST00000527959	EDEM1	Q92611	657 aa		13.7	□□□□□ -0.22
BBS1-213	ENST00000527959	PRCC	Q92733	491 aa	Predicted RBP	13.7	□□□□□ -0.22
BBS1-213	ENST00000527959	ERCC4	Q92889	916 aa	Predicted RBP	13.7	□□□□□ -0.22
BBS1-213	ENST00000527959	AZIN2	Q96A70	460 aa		13.7	□□□□□ -0.22
BBS1-213	ENST00000527959	NT5C1B	Q96P26	610 aa		13.7	□□□□□ -0.22
BBS1-213	ENST00000527959	NUP58	Q9BVL2	599 aa		13.7	□□□□□ -0.22
BBS1-213	ENST00000527959	CIPC	Q9C0C6	399 aa		13.7	□□□□□ -0.22
BBS1-213	ENST00000527959	PCED1A	Q9H1Q7	454 aa		13.7	□□□□□ -0.22
BBS1-213	ENST00000527959	TMEM245	Q9H330	911 aa		13.7	□□□□□ -0.22
BBS1-213	ENST00000527959	SFMBT1	Q9UHJ3	866 aa		13.7	□□□□□ -0.22
BBS1-213	ENST00000527959	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
BBS1-213	ENST00000527959	MUC22	E2RYF6	1773 aa	Predicted RBP	13.7	□□□□□ -0.22
BBS1-213	ENST00000527959		A0A1B0GTW7	788 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms