RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 DCLK2Q8N568 766 aa27.42■■□□□ 1.98
TSPAN4-217ENST00000527644 ADAM32Q8TC27 787 aa27.42■■□□□ 1.98
TSPAN4-217ENST00000527644 IPO4Q8TEX9 1081 aaKnown RBP27.42■■□□□ 1.98
TSPAN4-217ENST00000527644 DDX1Q92499 740 aaKnown RBP27.42■■□□□ 1.98
TSPAN4-217ENST00000527644 SLC39A13Q96H72 371 aa27.42■■□□□ 1.98
TSPAN4-217ENST00000527644 PIWIL1Q96J94 861 aaKnown RBP27.42■■□□□ 1.98
TSPAN4-217ENST00000527644 SYNCQ9H7C4 482 aa27.42■■□□□ 1.98
TSPAN4-217ENST00000527644 IRAK2O43187 625 aa27.41■■□□□ 1.98
TSPAN4-217ENST00000527644 TSPAN3O60637 253 aa27.41■■□□□ 1.98
TSPAN4-217ENST00000527644 HSF2BPO75031 334 aa27.41■■□□□ 1.98
TSPAN4-217ENST00000527644 HNRNPLP14866 589 aaKnown RBP eCLIP27.41■■□□□ 1.985e-7■□□□□ 11.2
TSPAN4-217ENST00000527644 UBXN1Q04323 297 aa27.41■■□□□ 1.98
TSPAN4-217ENST00000527644 SYCP1Q15431 976 aa27.41■■□□□ 1.98
TSPAN4-217ENST00000527644 PTPN20Q4JDL3 420 aa27.41■■□□□ 1.98
TSPAN4-217ENST00000527644 EGFLAMQ63HQ2 1017 aa27.41■■□□□ 1.98
TSPAN4-217ENST00000527644 OR6B2Q6IFH4 312 aa27.41■■□□□ 1.98
TSPAN4-217ENST00000527644 SDE2Q6IQ49 451 aa27.41■■□□□ 1.98
TSPAN4-217ENST00000527644 ANO7Q6IWH7 933 aa27.41■■□□□ 1.98
TSPAN4-217ENST00000527644 CACNA2D4Q7Z3S7 1137 aa27.41■■□□□ 1.98
TSPAN4-217ENST00000527644 ZDHHC17Q8IUH5 632 aa27.41■■□□□ 1.98
TSPAN4-217ENST00000527644 SLC2A13Q96QE2 648 aa27.41■■□□□ 1.98
TSPAN4-217ENST00000527644 CLEC4EQ9ULY5 219 aa27.41■■□□□ 1.98
TSPAN4-217ENST00000527644 FRYLO94915 3013 aa27.41■■□□□ 1.98
TSPAN4-217ENST00000527644 SMTNL1A8MU46 457 aa27.4■■□□□ 1.98
TSPAN4-217ENST00000527644 TRUB2O95900 331 aaKnown RBP27.4■■□□□ 1.98
TSPAN4-217ENST00000527644 IGLV3-25P01717 112 aa27.4■■□□□ 1.98
TSPAN4-217ENST00000527644 ERBB2P04626 1255 aa27.4■■□□□ 1.98
TSPAN4-217ENST00000527644 HOXD9P28356 352 aaPredicted RBP27.4■■□□□ 1.98
TSPAN4-217ENST00000527644 SLC6A3Q01959 620 aa27.4■■□□□ 1.98
TSPAN4-217ENST00000527644 KLHL40Q2TBA0 621 aa27.4■■□□□ 1.98
TSPAN4-217ENST00000527644 DCAF6Q58WW2 860 aa27.4■■□□□ 1.98
TSPAN4-217ENST00000527644 TAF3Q5VWG9 929 aa27.4■■□□□ 1.98
TSPAN4-217ENST00000527644 OLFML1Q6UWY5 402 aa27.4■■□□□ 1.98
TSPAN4-217ENST00000527644 FAM183BPQ6ZVS7 135 aa27.4■■□□□ 1.98
TSPAN4-217ENST00000527644 APTXQ7Z2E3 356 aaKnown RBP27.4■■□□□ 1.98
TSPAN4-217ENST00000527644 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.4■■□□□ 1.98
TSPAN4-217ENST00000527644 NOP9Q86U38 636 aaKnown RBP27.4■■□□□ 1.98
TSPAN4-217ENST00000527644 PCMTD1Q96MG8 357 aaPredicted RBP27.4■■□□□ 1.98
TSPAN4-217ENST00000527644 ERGIC2Q96RQ1 377 aa27.4■■□□□ 1.98
TSPAN4-217ENST00000527644 DDX50Q9BQ39 737 aaKnown RBP27.4■■□□□ 1.98
TSPAN4-217ENST00000527644 CFAP54Q96N23 3096 aa27.4■■□□□ 1.98
TSPAN4-217ENST00000527644 EPHB6O15197 1021 aa27.39■■□□□ 1.98
TSPAN4-217ENST00000527644 LSM8O95777 96 aaKnown RBP27.39■■□□□ 1.98
TSPAN4-217ENST00000527644 RETP07949 1114 aa27.39■■□□□ 1.98
TSPAN4-217ENST00000527644 JAM2P57087 298 aa27.39■■□□□ 1.98
TSPAN4-217ENST00000527644 CDK17Q00537 523 aa27.39■■□□□ 1.98
TSPAN4-217ENST00000527644 GEN1Q17RS7 908 aa27.39■■□□□ 1.98
TSPAN4-217ENST00000527644 FAM133BQ5BKY9 247 aaKnown RBP27.39■■□□□ 1.98
TSPAN4-217ENST00000527644 MPP7Q5T2T1 576 aa27.39■■□□□ 1.98
TSPAN4-217ENST00000527644 PIK3R6Q5UE93 754 aa27.39■■□□□ 1.98
TSPAN4-217ENST00000527644 ANKS1BQ7Z6G8 1248 aa27.39■■□□□ 1.98
TSPAN4-217ENST00000527644 ZNF677Q86XU0 584 aa27.39■■□□□ 1.98
TSPAN4-217ENST00000527644 CHPFQ8IZ52 775 aa27.39■■□□□ 1.98
TSPAN4-217ENST00000527644 DEFB106AQ8N104 65 aa27.39■■□□□ 1.98
TSPAN4-217ENST00000527644 GPR161Q8N6U8 529 aaKnown RBP27.39■■□□□ 1.98
TSPAN4-217ENST00000527644 MDGA1Q8NFP4 955 aa27.39■■□□□ 1.98
TSPAN4-217ENST00000527644 NEK11Q8NG66 645 aa27.39■■□□□ 1.98
TSPAN4-217ENST00000527644 EPS8L1Q8TE68 723 aa27.39■■□□□ 1.98
TSPAN4-217ENST00000527644 SPAG5Q96R06 1193 aa27.39■■□□□ 1.98
TSPAN4-217ENST00000527644 NLRC4Q9NPP4 1024 aa27.39■■□□□ 1.98
TSPAN4-217ENST00000527644 GOLGA6L7A0A1B0GV03 622 aa27.38■■□□□ 1.97
TSPAN4-217ENST00000527644 NPC1O15118 1278 aa27.38■■□□□ 1.97
TSPAN4-217ENST00000527644 GFPT2O94808 682 aa27.38■■□□□ 1.97
TSPAN4-217ENST00000527644 APOEP02649 317 aa27.38■■□□□ 1.97
TSPAN4-217ENST00000527644 ATP1A3P13637 1013 aa27.38■■□□□ 1.97
TSPAN4-217ENST00000527644 PTMSP20962 102 aa27.38■■□□□ 1.97
TSPAN4-217ENST00000527644 SOX5P35711 763 aa27.38■■□□□ 1.97
TSPAN4-217ENST00000527644 E2F5Q15329 346 aa27.38■■□□□ 1.97
TSPAN4-217ENST00000527644 USP39Q53GS9 565 aaKnown RBP27.38■■□□□ 1.97
TSPAN4-217ENST00000527644 RFWD3Q6PCD5 774 aa27.38■■□□□ 1.97
TSPAN4-217ENST00000527644 SLC26A9Q7LBE3 791 aa27.38■■□□□ 1.97
TSPAN4-217ENST00000527644 DHX40Q8IX18 779 aaKnown RBP27.38■■□□□ 1.97
TSPAN4-217ENST00000527644 FAM160A2Q8N612 972 aaPredicted RBP27.38■■□□□ 1.97
TSPAN4-217ENST00000527644 ZNF397Q8NF99 534 aaPredicted RBP27.38■■□□□ 1.97
TSPAN4-217ENST00000527644 UCMAQ8WVF2 138 aa27.38■■□□□ 1.97
TSPAN4-217ENST00000527644 ACOX2Q99424 681 aa27.38■■□□□ 1.97
TSPAN4-217ENST00000527644 EML5Q05BV3 1969 aa27.37■■□□□ 1.97
TSPAN4-217ENST00000527644 HOXB2P14652 356 aa27.37■■□□□ 1.97
TSPAN4-217ENST00000527644 SLC6A4P31645 630 aa27.37■■□□□ 1.97
TSPAN4-217ENST00000527644 GBP1P32455 592 aa27.37■■□□□ 1.97
TSPAN4-217ENST00000527644 STAT1P42224 750 aa27.37■■□□□ 1.97
TSPAN4-217ENST00000527644 WASP42768 502 aa27.37■■□□□ 1.97
TSPAN4-217ENST00000527644 GABRB2P47870 512 aa27.37■■□□□ 1.97
TSPAN4-217ENST00000527644 ZNF165P49910 485 aa27.37■■□□□ 1.97
TSPAN4-217ENST00000527644 EIF4EBP2Q13542 120 aaPredicted RBP27.37■■□□□ 1.97
TSPAN4-217ENST00000527644 EIF4HQ15056 248 aaKnown RBP27.37■■□□□ 1.97
TSPAN4-217ENST00000527644 NADSYN1Q6IA69 706 aa27.37■■□□□ 1.97
TSPAN4-217ENST00000527644 ERICH1Q86X53 443 aa27.37■■□□□ 1.97
TSPAN4-217ENST00000527644 KIAA2013Q8IYS2 634 aa27.37■■□□□ 1.97
TSPAN4-217ENST00000527644 C18orf8Q96DM3 657 aa27.37■■□□□ 1.97
TSPAN4-217ENST00000527644 LOXL4Q96JB6 756 aa27.37■■□□□ 1.97
TSPAN4-217ENST00000527644 ZC3H10Q96K80 434 aaKnown RBP27.37■■□□□ 1.97
TSPAN4-217ENST00000527644 GABRG3Q99928 467 aa27.37■■□□□ 1.97
TSPAN4-217ENST00000527644 FUCA2Q9BTY2 467 aa27.37■■□□□ 1.97
TSPAN4-217ENST00000527644 TPSD1Q9BZJ3 242 aa27.37■■□□□ 1.97
TSPAN4-217ENST00000527644 SLTMQ9NWH9 1034 aaKnown RBP eCLIP27.37■■□□□ 1.976e-7■■■□□ 19
TSPAN4-217ENST00000527644 TCRBV21S2A2A0A5A6 115 aa27.36■■□□□ 1.97
TSPAN4-217ENST00000527644 TIMM44O43615 452 aa27.36■■□□□ 1.97
TSPAN4-217ENST00000527644 GRAP2O75791 330 aa27.36■■□□□ 1.97
TSPAN4-217ENST00000527644 MMEP08473 750 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms