RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 SLC2A13Q96QE2 648 aa13.91□□□□□ -0.18
CAPN1-209ENST00000527469 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.91□□□□□ -0.18
CAPN1-209ENST00000527469 RAB23Q9ULC3 237 aa13.91□□□□□ -0.18
CAPN1-209ENST00000527469 MYO6Q9UM54 1294 aa13.91□□□□□ -0.18
CAPN1-209ENST00000527469 PAXBP1Q9Y5B6 917 aa13.91□□□□□ -0.18
CAPN1-209ENST00000527469 WDR87Q6ZQQ6 2873 aa13.91□□□□□ -0.18
CAPN1-209ENST00000527469 ATG2BQ96BY7 2078 aa13.91□□□□□ -0.18
CAPN1-209ENST00000527469 RIF1Q5UIP0 2472 aaKnown RBP13.9□□□□□ -0.18
CAPN1-209ENST00000527469 ZBTB24O43167 697 aaPredicted RBP13.9□□□□□ -0.18
CAPN1-209ENST00000527469 IRAK2O43187 625 aa13.9□□□□□ -0.18
CAPN1-209ENST00000527469 IGLV3-27P01718 113 aa13.9□□□□□ -0.18
CAPN1-209ENST00000527469 CCR1P32246 355 aa13.9□□□□□ -0.18
CAPN1-209ENST00000527469 NOS2P35228 1153 aa13.9□□□□□ -0.18
CAPN1-209ENST00000527469 GABRB2P47870 512 aa13.9□□□□□ -0.18
CAPN1-209ENST00000527469 FNTBP49356 437 aa13.9□□□□□ -0.18
CAPN1-209ENST00000527469 FMO1Q01740 532 aa13.9□□□□□ -0.18
CAPN1-209ENST00000527469 MESP2Q0VG99 397 aa13.9□□□□□ -0.18
CAPN1-209ENST00000527469 NR1I3Q14994 352 aa13.9□□□□□ -0.18
CAPN1-209ENST00000527469 E2F5Q15329 346 aa13.9□□□□□ -0.18
CAPN1-209ENST00000527469 ASIC2Q16515 512 aa13.9□□□□□ -0.18
CAPN1-209ENST00000527469 HSF5Q4G112 596 aaPredicted RBP13.9□□□□□ -0.18
CAPN1-209ENST00000527469 ZC3H12AQ5D1E8 599 aaKnown RBP13.9□□□□□ -0.18
CAPN1-209ENST00000527469 EOGTQ5NDL2 527 aa13.9□□□□□ -0.18
CAPN1-209ENST00000527469 SFMBT2Q5VUG0 894 aa13.9□□□□□ -0.18
CAPN1-209ENST00000527469 FYB2Q5VWT5 728 aa13.9□□□□□ -0.18
CAPN1-209ENST00000527469 MMS22LQ6ZRQ5 1243 aa13.9□□□□□ -0.18
CAPN1-209ENST00000527469 LONP2Q86WA8 852 aa13.9□□□□□ -0.18
CAPN1-209ENST00000527469 CHSY1Q86X52 802 aa13.9□□□□□ -0.18
CAPN1-209ENST00000527469 FAM217AQ8IXS0 508 aa13.9□□□□□ -0.18
CAPN1-209ENST00000527469 CAMKK1Q8N5S9 505 aa13.9□□□□□ -0.18
CAPN1-209ENST00000527469 ZNF513Q8N8E2 541 aaPredicted RBP13.9□□□□□ -0.18
CAPN1-209ENST00000527469 HJURPQ8NCD3 748 aaPredicted RBP13.9□□□□□ -0.18
CAPN1-209ENST00000527469 ZNF397Q8NF99 534 aaPredicted RBP13.9□□□□□ -0.18
CAPN1-209ENST00000527469 TSTD1Q8NFU3 115 aa13.9□□□□□ -0.18
CAPN1-209ENST00000527469 KCNV2Q8TDN2 545 aa13.9□□□□□ -0.18
CAPN1-209ENST00000527469 UCMAQ8WVF2 138 aa13.9□□□□□ -0.18
CAPN1-209ENST00000527469 AZIN2Q96A70 460 aa13.9□□□□□ -0.18
CAPN1-209ENST00000527469 BTN2A3PQ96KV6 586 aa13.9□□□□□ -0.18
CAPN1-209ENST00000527469 FCRL2Q96LA5 508 aaPredicted RBP13.9□□□□□ -0.18
CAPN1-209ENST00000527469 HHIPQ96QV1 700 aa13.9□□□□□ -0.18
CAPN1-209ENST00000527469 PHOX2BQ99453 314 aa13.9□□□□□ -0.18
CAPN1-209ENST00000527469 AGPAT1Q99943 283 aa13.9□□□□□ -0.18
CAPN1-209ENST00000527469 SLC2A11Q9BYW1 496 aa13.9□□□□□ -0.18
CAPN1-209ENST00000527469 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.9□□□□□ -0.18
CAPN1-209ENST00000527469 RRN3Q9NYV6 651 aa13.9□□□□□ -0.18
CAPN1-209ENST00000527469 A0A0A0MRY4 1105 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 ANKRD62A6NC57 917 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 LRRC53A6NM62 1247 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 M0QYT0 321 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 TRIM24O15164 1050 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 GFRA3O60609 400 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 TBL1XO60907 577 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 ALDH1A2O94788 518 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 APBB3O95704 486 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 CYP1A1P04798 512 aaPredicted RBP13.89□□□□□ -0.19
CAPN1-209ENST00000527469 CALB1P05937 261 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 CHRNB2P17787 502 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 TNFAIP3P21580 790 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 SCNN1AP37088 669 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 MATKP42679 507 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 SULT1E1P49888 294 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 MRE11P49959 708 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 DGKEP52429 567 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 MTA1Q13330 715 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 C2CD6Q53TS8 623 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 RFWD3Q6PCD5 774 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 LRSAM1Q6UWE0 723 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 CEP68Q76N32 757 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 ANKS1BQ7Z6G8 1248 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 ALYREFQ86V81 257 aaKnown RBP13.89□□□□□ -0.19
CAPN1-209ENST00000527469 XYLT1Q86Y38 959 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 SFTPA1Q8IWL2 248 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 CHPFQ8IZ52 775 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 PHTF2Q8N3S3 785 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 ZNF557Q8N988 423 aaPredicted RBP13.89□□□□□ -0.19
CAPN1-209ENST00000527469 TXNDC5Q8NBS9 432 aaKnown RBP13.89□□□□□ -0.19
CAPN1-209ENST00000527469 SLC30A5Q8TAD4 765 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 HINFPQ9BQA5 517 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 C11orf70Q9BRQ4 267 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 NUP58Q9BVL2 599 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 IRX2Q9BZI1 471 aaPredicted RBP13.89□□□□□ -0.19
CAPN1-209ENST00000527469 POLMQ9NP87 494 aaPredicted RBP13.89□□□□□ -0.19
CAPN1-209ENST00000527469 C2orf42Q9NWW7 574 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 ADAM22Q9P0K1 906 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 STIM2Q9P246 746 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 BCCIPQ9P287 314 aaKnown RBP eCLIP13.89□□□□□ -0.19
CAPN1-209ENST00000527469 STOML2Q9UJZ1 356 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 MMP17Q9ULZ9 603 aa13.89□□□□□ -0.19
CAPN1-209ENST00000527469 GOLGA6L7A0A1B0GV03 622 aa13.88□□□□□ -0.19
CAPN1-209ENST00000527469 PROB1E7EW31 1015 aa13.88□□□□□ -0.19
CAPN1-209ENST00000527469 F5H5T6 163 aa13.88□□□□□ -0.19
CAPN1-209ENST00000527469 K7ESF4 209 aa13.88□□□□□ -0.19
CAPN1-209ENST00000527469 CBFA2T2O43439 604 aa13.88□□□□□ -0.19
CAPN1-209ENST00000527469 F9P00740 461 aa13.88□□□□□ -0.19
CAPN1-209ENST00000527469 LMNAP02545 664 aaKnown RBP13.88□□□□□ -0.19
CAPN1-209ENST00000527469 MMP8P22894 467 aa13.88□□□□□ -0.19
CAPN1-209ENST00000527469 HOXA6P31267 233 aa13.88□□□□□ -0.19
CAPN1-209ENST00000527469 PXNP49023 591 aaPredicted RBP13.88□□□□□ -0.19
CAPN1-209ENST00000527469 CLEC16AQ2KHT3 1053 aa13.88□□□□□ -0.19
CAPN1-209ENST00000527469 EMC10Q5UCC4 262 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms