RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 DNAJC1Q96KC8 554 aaKnown RBP12.67□□□□□ -0.38
FGFR1-227ENST00000526570 CYP26B1Q9NR63 512 aa12.67□□□□□ -0.38
FGFR1-227ENST00000526570 H2AFY2Q9P0M6 372 aaPredicted RBP12.67□□□□□ -0.38
FGFR1-227ENST00000526570 SSNA1O43805 119 aa12.67□□□□□ -0.38
FGFR1-227ENST00000526570 FAM20BO75063 409 aa12.67□□□□□ -0.38
FGFR1-227ENST00000526570 ZBTB11O95625 1053 aaPredicted RBP12.67□□□□□ -0.38
FGFR1-227ENST00000526570 RARAP10276 462 aa12.67□□□□□ -0.38
FGFR1-227ENST00000526570 SOX11P35716 441 aa12.67□□□□□ -0.38
FGFR1-227ENST00000526570 EIF2S3P41091 472 aaKnown RBP12.67□□□□□ -0.38
FGFR1-227ENST00000526570 GDI2P50395 445 aaKnown RBP12.67□□□□□ -0.38
FGFR1-227ENST00000526570 VAMP7P51809 220 aa12.67□□□□□ -0.38
FGFR1-227ENST00000526570 TSTA3Q13630 321 aaPredicted RBP12.67□□□□□ -0.38
FGFR1-227ENST00000526570 C6orf10Q5SRN2 563 aa12.67□□□□□ -0.38
FGFR1-227ENST00000526570 GARNL3Q5VVW2 1013 aa12.67□□□□□ -0.38
FGFR1-227ENST00000526570 LRRC8DQ7L1W4 858 aa12.67□□□□□ -0.38
FGFR1-227ENST00000526570 RAB43Q86YS6 212 aa12.67□□□□□ -0.38
FGFR1-227ENST00000526570 CKAP2Q8WWK9 683 aa12.67□□□□□ -0.38
FGFR1-227ENST00000526570 TMEM143Q96AN5 459 aa12.67□□□□□ -0.38
FGFR1-227ENST00000526570 UQCC2Q9BRT2 126 aa12.67□□□□□ -0.38
FGFR1-227ENST00000526570 RERGLQ9H628 205 aa12.67□□□□□ -0.38
FGFR1-227ENST00000526570 CD44P16070 742 aaKnown RBP12.67□□□□□ -0.38
FGFR1-227ENST00000526570 EIF4BP23588 611 aaKnown RBP12.67□□□□□ -0.38
FGFR1-227ENST00000526570 CDK17Q00537 523 aa12.67□□□□□ -0.38
FGFR1-227ENST00000526570 CDO1Q16878 200 aa12.67□□□□□ -0.38
FGFR1-227ENST00000526570 TTC39BQ5VTQ0 682 aaPredicted RBP12.67□□□□□ -0.38
FGFR1-227ENST00000526570 ELMOD2Q8IZ81 293 aa12.67□□□□□ -0.38
FGFR1-227ENST00000526570 GUF1Q8N442 669 aaKnown RBP12.67□□□□□ -0.38
FGFR1-227ENST00000526570 DYRK4Q9NR20 520 aa12.67□□□□□ -0.38
FGFR1-227ENST00000526570 TBCCD1Q9NVR7 557 aa12.67□□□□□ -0.38
FGFR1-227ENST00000526570 ARMCX1Q9P291 453 aa12.67□□□□□ -0.38
FGFR1-227ENST00000526570 FAM92AA1XBS5 289 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 TK2O00142 265 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 PRPSAP2O60256 369 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 SERPINB5P36952 375 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 GNG2P59768 71 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 HSF2Q03933 536 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 C1DQ13901 141 aaKnown RBP12.66□□□□□ -0.38
FGFR1-227ENST00000526570 PDIA5Q14554 519 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 SPDYCQ5MJ68 293 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 NBPF12Q5TAG4 269 aaPredicted RBP12.66□□□□□ -0.38
FGFR1-227ENST00000526570 HAUS6Q7Z4H7 955 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 TDRD5Q8NAT2 981 aaKnown RBP12.66□□□□□ -0.38
FGFR1-227ENST00000526570 FAM118BQ9BPY3 351 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 ZSCAN5AQ9BUG6 496 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 ZC3H7BQ9UGR2 993 aaKnown RBP12.66□□□□□ -0.38
FGFR1-227ENST00000526570 ZC3H11AO75152 810 aaKnown RBP eCLIP12.66□□□□□ -0.38
FGFR1-227ENST00000526570 BMP10O95393 424 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 CTSHP09668 335 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 NPR3P17342 541 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 RCVRNP35243 200 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 RAP1GAPP47736 663 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 SWI5Q1ZZU3 235 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 TBCELQ5QJ74 424 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 KLHDC7AQ5VTJ3 777 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 BROXQ5VW32 411 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 C3orf62Q6ZUJ4 267 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 FRMD7Q6ZUT3 714 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 RHOT1Q8IXI2 618 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 SCFD1Q8WVM8 642 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 ROGDIQ9GZN7 287 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 IL1RL2Q9HB29 575 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 ZNF232Q9UNY5 417 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 C15orf38-AP3S2A0A0A6YYH1 394 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 DDTLA6NHG4 134 aaPredicted RBP12.66□□□□□ -0.38
FGFR1-227ENST00000526570 I3L521 148 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 SPTLC1O15269 473 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 NMT1P30419 496 aaKnown RBP12.66□□□□□ -0.38
FGFR1-227ENST00000526570 CDK16Q00536 496 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 CARTPTQ16568 116 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 TIMM50Q3ZCQ8 353 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 SLC45A4Q5BKX6 768 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 RIPOR1Q6ZS17 1223 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 PTF1AQ7RTS3 328 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 ARPINQ7Z6K5 226 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 SCN4BQ8IWT1 228 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 TADA1Q96BN2 335 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 NSMCE3Q96MG7 304 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 TAAR1Q96RJ0 339 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 PLAGL2Q9UPG8 496 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 H7C2Y5 167 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 M0QX08 132 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 IFI30P13284 250 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 SPIRE1Q08AE8 756 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 TFDP2Q14188 446 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 PON2Q15165 354 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 XKR3Q5GH77 459 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 TMEM270Q6UE05 265 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 GPD1LQ8N335 351 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 BBS5Q8N3I7 341 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 ERLEC1Q96DZ1 483 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 SLC4A9Q96Q91 983 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 ERGIC2Q96RQ1 377 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 MTG1Q9BT17 334 aaPredicted RBP12.66□□□□□ -0.38
FGFR1-227ENST00000526570 MAF1Q9H063 256 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 INTS2Q9H0H0 1204 aaKnown RBP12.66□□□□□ -0.38
FGFR1-227ENST00000526570 CPSF3Q9UKF6 684 aaKnown RBP12.66□□□□□ -0.38
FGFR1-227ENST00000526570 NAALADL1Q9UQQ1 740 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 PIN4Q9Y237 131 aaKnown RBP12.66□□□□□ -0.38
FGFR1-227ENST00000526570 WEE2P0C1S8 567 aa12.66□□□□□ -0.38
FGFR1-227ENST00000526570 ITIH1P19827 911 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms