RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 SHC3Q92529 594 aa11.5□□□□□ -0.57
NEDD8-204ENST00000526430 ZNF419Q96HQ0 510 aaPredicted RBP11.5□□□□□ -0.57
NEDD8-204ENST00000526430 HSPA12BQ96MM6 686 aa11.5□□□□□ -0.57
NEDD8-204ENST00000526430 SYT15Q9BQS2 421 aa11.5□□□□□ -0.57
NEDD8-204ENST00000526430 B3GNT5Q9BYG0 378 aa11.5□□□□□ -0.57
NEDD8-204ENST00000526430 XPO4Q9C0E2 1151 aaKnown RBP11.5□□□□□ -0.57
NEDD8-204ENST00000526430 TTYH3Q9C0H2 523 aa11.5□□□□□ -0.57
NEDD8-204ENST00000526430 ACP6Q9NPH0 428 aa11.5□□□□□ -0.57
NEDD8-204ENST00000526430 IFNKQ9P0W0 207 aa11.5□□□□□ -0.57
NEDD8-204ENST00000526430 DNAJC12Q9UKB3 198 aa11.5□□□□□ -0.57
NEDD8-204ENST00000526430 CDH9Q9ULB4 789 aa11.5□□□□□ -0.57
NEDD8-204ENST00000526430 PCDHGB2Q9Y5G2 931 aa11.5□□□□□ -0.57
NEDD8-204ENST00000526430 FHOD1Q9Y613 1164 aa11.5□□□□□ -0.57
NEDD8-204ENST00000526430 IGHV1OR15-9A0A0B4J2B8 117 aa11.49□□□□□ -0.57
NEDD8-204ENST00000526430 A8MXQ7 604 aa11.49□□□□□ -0.57
NEDD8-204ENST00000526430 FOXN3O00409 490 aaPredicted RBP11.49□□□□□ -0.57
NEDD8-204ENST00000526430 FLRT2O43155 660 aa11.49□□□□□ -0.57
NEDD8-204ENST00000526430 ZNF217O75362 1048 aa11.49□□□□□ -0.57
NEDD8-204ENST00000526430 WISP1O95388 367 aa11.49□□□□□ -0.57
NEDD8-204ENST00000526430 CER1O95813 267 aa11.49□□□□□ -0.57
NEDD8-204ENST00000526430 PNMA6AP0CW24 399 aaPredicted RBP11.49□□□□□ -0.57
NEDD8-204ENST00000526430 HAPLN1P10915 354 aaPredicted RBP11.49□□□□□ -0.57
NEDD8-204ENST00000526430 CD58P19256 250 aa11.49□□□□□ -0.57
NEDD8-204ENST00000526430 CLCN1P35523 988 aa11.49□□□□□ -0.57
NEDD8-204ENST00000526430 CACNA2D1P54289 1103 aa11.49□□□□□ -0.57
NEDD8-204ENST00000526430 UBASH3AP57075 661 aa11.49□□□□□ -0.57
NEDD8-204ENST00000526430 JAM2P57087 298 aa11.49□□□□□ -0.57
NEDD8-204ENST00000526430 SLC39A12Q504Y0 691 aa11.49□□□□□ -0.57
NEDD8-204ENST00000526430 SARM1Q6SZW1 724 aa11.49□□□□□ -0.57
NEDD8-204ENST00000526430 FUKQ8N0W3 1084 aa11.49□□□□□ -0.57
NEDD8-204ENST00000526430 THEM5Q8N1Q8 247 aa11.49□□□□□ -0.57
NEDD8-204ENST00000526430 PGBD3Q8N328 593 aa11.49□□□□□ -0.57
NEDD8-204ENST00000526430 PPM1KQ8N3J5 372 aa11.49□□□□□ -0.57
NEDD8-204ENST00000526430 DEFB119Q8N690 84 aa11.49□□□□□ -0.57
NEDD8-204ENST00000526430 MYCBPAPQ8TBZ2 947 aa11.49□□□□□ -0.57
NEDD8-204ENST00000526430 GIPC2Q8TF65 315 aa11.49□□□□□ -0.57
NEDD8-204ENST00000526430 TFAP2BQ92481 460 aa11.49□□□□□ -0.57
NEDD8-204ENST00000526430 FOXJ1Q92949 421 aa11.49□□□□□ -0.57
NEDD8-204ENST00000526430 TRMT2BQ96GJ1 504 aaKnown RBP11.49□□□□□ -0.57
NEDD8-204ENST00000526430 PCED1BQ96HM7 432 aa11.49□□□□□ -0.57
NEDD8-204ENST00000526430 IMPG2Q9BZV3 1241 aa11.49□□□□□ -0.57
NEDD8-204ENST00000526430 CALCOCO1Q9P1Z2 691 aa11.49□□□□□ -0.57
NEDD8-204ENST00000526430 R3HCC1Q9Y3T6 440 aaKnown RBP11.49□□□□□ -0.57
NEDD8-204ENST00000526430 AHCTF1Q8WYP5 2266 aa11.49□□□□□ -0.57
NEDD8-204ENST00000526430 FLNCQ14315 2725 aa11.48□□□□□ -0.57
NEDD8-204ENST00000526430 TRAV19A0A0A6YYK7 116 aa11.48□□□□□ -0.57
NEDD8-204ENST00000526430 A0A1W2PQC6 194 aa11.48□□□□□ -0.57
NEDD8-204ENST00000526430 B8ZZF3 427 aa11.48□□□□□ -0.57
NEDD8-204ENST00000526430 GOLGA6L19H0YKK7 550 aa11.48□□□□□ -0.57
NEDD8-204ENST00000526430 CLDN5O00501 218 aa11.48□□□□□ -0.57
NEDD8-204ENST00000526430 TLX3O43711 291 aaPredicted RBP11.48□□□□□ -0.57
NEDD8-204ENST00000526430 TADA3O75528 432 aa11.48□□□□□ -0.57
NEDD8-204ENST00000526430 BEST1O76090 585 aa11.48□□□□□ -0.57
NEDD8-204ENST00000526430 KAT7O95251 611 aa11.48□□□□□ -0.57
NEDD8-204ENST00000526430 CSH1P0DML2 217 aa11.48□□□□□ -0.57
NEDD8-204ENST00000526430 CSH2P0DML3 217 aa11.48□□□□□ -0.57
NEDD8-204ENST00000526430 GABRG2P18507 467 aa11.48□□□□□ -0.57
NEDD8-204ENST00000526430 TBXAS1P24557 533 aaPredicted RBP11.48□□□□□ -0.57
NEDD8-204ENST00000526430 TIE1P35590 1138 aa11.48□□□□□ -0.57
NEDD8-204ENST00000526430 TNFRSF4P43489 277 aa11.48□□□□□ -0.57
NEDD8-204ENST00000526430 CETN1Q12798 172 aa11.48□□□□□ -0.57
NEDD8-204ENST00000526430 PTPRNQ16849 979 aa11.48□□□□□ -0.57
NEDD8-204ENST00000526430 ZNF394Q53GI3 561 aa11.48□□□□□ -0.57
NEDD8-204ENST00000526430 SYCP2LQ5T4T6 812 aa11.48□□□□□ -0.57
NEDD8-204ENST00000526430 FAM181AQ8N9Y4 354 aa11.48□□□□□ -0.57
NEDD8-204ENST00000526430 B3GALNT2Q8NCR0 500 aa11.48□□□□□ -0.57
NEDD8-204ENST00000526430 ZMIZ2Q8NF64 920 aa11.48□□□□□ -0.57
NEDD8-204ENST00000526430 SNIP1Q8TAD8 396 aaKnown RBP11.48□□□□□ -0.57
NEDD8-204ENST00000526430 KCNV2Q8TDN2 545 aa11.48□□□□□ -0.57
NEDD8-204ENST00000526430 BAP1Q92560 729 aa11.48□□□□□ -0.57
NEDD8-204ENST00000526430 JAKMIP2Q96AA8 810 aa11.48□□□□□ -0.57
NEDD8-204ENST00000526430 TMEM176AQ96HP8 235 aa11.48□□□□□ -0.57
NEDD8-204ENST00000526430 PNKPQ96T60 521 aa11.48□□□□□ -0.57
NEDD8-204ENST00000526430 LINC00597Q9H2U6 94 aa11.48□□□□□ -0.57
NEDD8-204ENST00000526430 SNX25Q9H3E2 840 aa11.48□□□□□ -0.57
NEDD8-204ENST00000526430 TM7SF3Q9NS93 570 aa11.48□□□□□ -0.57
NEDD8-204ENST00000526430 FAM207AQ9NSI2 230 aaPredicted RBP11.48□□□□□ -0.57
NEDD8-204ENST00000526430 UXTQ9UBK9 157 aaPredicted RBP11.48□□□□□ -0.57
NEDD8-204ENST00000526430 A0A1B0GTW7 788 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 FAM149AA5PLN7 773 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 PES1O00541 588 aaKnown RBP11.47□□□□□ -0.57
NEDD8-204ENST00000526430 GABBR2O75899 941 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 SERPINC1P01008 464 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 APODP05090 189 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 CYP17A1P05093 508 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 CKMP06732 381 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 P4HA1P13674 534 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 CYP2F1P24903 491 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 PCSK1P29120 753 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 GPR15P49685 360 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 DRAP1Q14919 205 aaPredicted RBP11.47□□□□□ -0.57
NEDD8-204ENST00000526430 ARHGAP44Q17R89 818 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 CFAP221Q4G0U5 840 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 PKDCCQ504Y2 493 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 MDH1BQ5I0G3 518 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 WDR45BQ5MNZ6 344 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 PPP1R26Q5T8A7 1209 aaPredicted RBP11.47□□□□□ -0.57
NEDD8-204ENST00000526430 TMEM270Q6UE05 265 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 IL27RAQ6UWB1 636 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 TRMT11Q7Z4G4 463 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms