RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 HSFX1Q9UBD0 423 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 MAD2L2Q9UI95 211 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 FEM1BQ9UK73 627 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 SLC45A2Q9UMX9 530 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.05□□□□□ -1.6
USP48-211ENST00000526044 COL4A3Q01955 1670 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 FRMPD2Q68DX3 1309 aaPredicted RBP5.04□□□□□ -1.6
USP48-211ENST00000526044 OTOFQ9HC10 1997 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 CCL15-CCL14A0A0B4J2E2 113 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 PIPSLA2A3N6 862 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 MYADML2A6NDP7 307 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 MANSC4A6NHS7 340 aaPredicted RBP5.04□□□□□ -1.6
USP48-211ENST00000526044 PRPF3O43395 683 aaKnown RBP5.04□□□□□ -1.6
USP48-211ENST00000526044 B3GALT2O43825 422 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 PLA2G6O60733 806 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 FLOT1O75955 427 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 LARGE1O95461 756 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 TGM1P22735 817 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 HOXA7P31268 230 aaPredicted RBP5.04□□□□□ -1.6
USP48-211ENST00000526044 SLC16A2P36021 539 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 STAT2P52630 851 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 INHBCP55103 352 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 ZNF844Q08AG5 666 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 GRM1Q13255 1194 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 CUL4AQ13619 759 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 TP53BP2Q13625 1128 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 CCL15Q16663 113 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 CYP2A13Q16696 494 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 ABHD17BQ5VST6 288 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 Q6ZPA2 131 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 MRGPRGQ86SM5 289 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 FAM160B2Q86V87 743 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 ZNF575Q86XF7 245 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 RASAL3Q86YV0 1011 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 VRK3Q8IV63 474 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 SRBD1Q8N5C6 995 aaKnown RBP5.04□□□□□ -1.6
USP48-211ENST00000526044 FAM184AQ8NB25 1140 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 SLC17A8Q8NDX2 589 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 GTF3C6Q969F1 213 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 CHFRQ96EP1 664 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 KLHL32Q96NJ5 620 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 P2RX7Q99572 595 aaKnown RBP5.04□□□□□ -1.6
USP48-211ENST00000526044 LLPHQ9BRT6 129 aaKnown RBP5.04□□□□□ -1.6
USP48-211ENST00000526044 IMPG2Q9BZV3 1241 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 RPAP3Q9H6T3 665 aaPredicted RBP5.04□□□□□ -1.6
USP48-211ENST00000526044 RIOX1Q9H6W3 641 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 LMBRD1Q9NUN5 540 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 PNPOQ9NVS9 261 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 RLIMQ9NVW2 624 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 FEZ2Q9UHY8 353 aaPredicted RBP5.04□□□□□ -1.6
USP48-211ENST00000526044 SMC3Q9UQE7 1217 aa5.04□□□□□ -1.6
USP48-211ENST00000526044 MYH6P13533 1939 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 H3BUI4 141 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 PDHXO00330 501 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 FOXN1O15353 648 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 CYTH3O43739 400 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 RAMP2O60895 175 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 ZBED4O75132 1171 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 PPFIA2O75334 1257 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 PLEKHA8P1O95397 391 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 CTDNEP1O95476 244 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 GJB1P08034 283 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 EGR2P11161 476 aaPredicted RBP5.03□□□□□ -1.6
USP48-211ENST00000526044 TYRP14679 529 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 IFNAR1P17181 557 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 KRT4P19013 534 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 IL12RB1P42701 662 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 TM4SF4P48230 202 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 PIK3CGP48736 1102 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 C1QTNF8P60827 252 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 IRX3P78415 501 aaPredicted RBP5.03□□□□□ -1.6
USP48-211ENST00000526044 BLOC1S1P78537 153 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 HMGN5P82970 282 aaKnown RBP5.03□□□□□ -1.6
USP48-211ENST00000526044 ZNF267Q14586 743 aaPredicted RBP5.03□□□□□ -1.6
USP48-211ENST00000526044 NFE2Q16621 373 aaPredicted RBP5.03□□□□□ -1.6
USP48-211ENST00000526044 TREML2Q5T2D2 321 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.03□□□□□ -1.6
USP48-211ENST00000526044 TSHZ1Q6ZSZ6 1077 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 TMTC3Q6ZXV5 915 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 C11orf96Q7Z7L8 435 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 ANKRD23Q86SG2 305 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 LDLRAD3Q86YD5 345 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 FAM90A1Q86YD7 464 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 RAVER1Q8IY67 606 aaKnown RBP5.03□□□□□ -1.6
USP48-211ENST00000526044 COLGALT2Q8IYK4 626 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 CHPFQ8IZ52 775 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 ADGRF4Q8IZF3 695 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 SH2D3CQ8N5H7 860 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 NSUN7Q8NE18 718 aaKnown RBP5.03□□□□□ -1.6
USP48-211ENST00000526044 TMIEQ8NEW7 156 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 SLC35G2Q8TBE7 412 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 DIS3LQ8TF46 1054 aaKnown RBP5.03□□□□□ -1.6
USP48-211ENST00000526044 PIBF1Q8WXW3 757 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 WASF1Q92558 559 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 PHKBQ93100 1093 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 SCAMP4Q969E2 229 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 FUBP1Q96AE4 644 aaKnown RBP5.03□□□□□ -1.6
USP48-211ENST00000526044 NACC2Q96BF6 587 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 RRP36Q96EU6 259 aaKnown RBP5.03□□□□□ -1.6
USP48-211ENST00000526044 CDK5RAP3Q96JB5 506 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms