RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 CCDC174Q6PII3 467 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 NAPRTQ6XQN6 538 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 Q6ZWC4 215 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 ZNF804AQ7Z570 1209 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 GATAD2AQ86YP4 633 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 ATG16L2Q8NAA4 619 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 MBD3L2Q8NHZ7 208 aaPredicted RBP4.47□□□□□ -1.69
CD44-219ENST00000525685 DPF1Q92782 380 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 C18orf8Q96DM3 657 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 RSPRY1Q96DX4 576 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 ZDHHC12Q96GR4 267 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 PAGR1Q9BTK6 254 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 EPS8L2Q9H6S3 715 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 OBP2BQ9NPH6 170 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 NECTIN3Q9NQS3 549 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 DUSP22Q9NRW4 184 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 DLL3Q9NYJ7 618 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 ADAMTS5Q9UNA0 930 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 WNT6Q9Y6F9 365 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 TMEM2Q9UHN6 1383 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 MED14O60244 1454 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 COL3A1P02461 1466 aaPredicted RBP4.47□□□□□ -1.69
CD44-219ENST00000525685 NPHP4O75161 1426 aaPredicted RBP4.46□□□□□ -1.69
CD44-219ENST00000525685 NEXMIFQ5QGS0 1516 aa4.46□□□□□ -1.69
CD44-219ENST00000525685 NRXN3Q9Y4C0 1643 aa4.46□□□□□ -1.69
CD44-219ENST00000525685 IFT172Q9UG01 1749 aa4.46□□□□□ -1.69
CD44-219ENST00000525685 PPLO60437 1756 aa4.46□□□□□ -1.7
CD44-219ENST00000525685 PNMA6EA0A0J9YXQ4 647 aa4.46□□□□□ -1.7
CD44-219ENST00000525685 GOLGA6L3A6NEY3 463 aa4.46□□□□□ -1.7
CD44-219ENST00000525685 MANSC4A6NHS7 340 aaPredicted RBP4.46□□□□□ -1.7
CD44-219ENST00000525685 AGPSO00116 658 aa4.46□□□□□ -1.7
CD44-219ENST00000525685 KCNQ3O43525 872 aa4.46□□□□□ -1.7
CD44-219ENST00000525685 PDE8BO95263 885 aa4.46□□□□□ -1.7
CD44-219ENST00000525685 DRD1P21728 446 aa4.46□□□□□ -1.7
CD44-219ENST00000525685 DRD4P21917 467 aa4.46□□□□□ -1.7
CD44-219ENST00000525685 IL6STP40189 918 aaPredicted RBP4.46□□□□□ -1.7
CD44-219ENST00000525685 TRAPPC10P48553 1259 aa4.46□□□□□ -1.7
CD44-219ENST00000525685 ALDH18A1P54886 795 aaKnown RBP4.46□□□□□ -1.7
CD44-219ENST00000525685 SRSF4Q08170 494 aaKnown RBP4.46□□□□□ -1.7
CD44-219ENST00000525685 BLMHQ13867 455 aa4.46□□□□□ -1.7
CD44-219ENST00000525685 PFKFB4Q16877 469 aa4.46□□□□□ -1.7
CD44-219ENST00000525685 AARS2Q5JTZ9 985 aaKnown RBP4.46□□□□□ -1.7
CD44-219ENST00000525685 ANO1Q5XXA6 986 aa4.46□□□□□ -1.7
CD44-219ENST00000525685 MTHFD1LQ6UB35 978 aa4.46□□□□□ -1.7
CD44-219ENST00000525685 KIAA0408Q6ZU52 694 aa4.46□□□□□ -1.7
CD44-219ENST00000525685 FAM71DQ8N9W8 422 aa4.46□□□□□ -1.7
CD44-219ENST00000525685 CYP2W1Q8TAV3 490 aa4.46□□□□□ -1.7
CD44-219ENST00000525685 CCT6BQ92526 530 aa4.46□□□□□ -1.7
CD44-219ENST00000525685 SLC39A13Q96H72 371 aa4.46□□□□□ -1.7
CD44-219ENST00000525685 HS6ST2Q96MM7 605 aa4.46□□□□□ -1.7
CD44-219ENST00000525685 PRR25Q96S07 402 aa4.46□□□□□ -1.7
CD44-219ENST00000525685 PPCSQ9HAB8 311 aa4.46□□□□□ -1.7
CD44-219ENST00000525685 USP29Q9HBJ7 922 aa4.46□□□□□ -1.7
CD44-219ENST00000525685 TRIM36Q9NQ86 728 aa4.46□□□□□ -1.7
CD44-219ENST00000525685 HELLSQ9NRZ9 838 aa4.46□□□□□ -1.7
CD44-219ENST00000525685 SH3BP4Q9P0V3 963 aa4.46□□□□□ -1.7
CD44-219ENST00000525685 RIMKLBQ9ULI2 386 aa4.46□□□□□ -1.7
CD44-219ENST00000525685 LTBP4Q8N2S1 1624 aa4.46□□□□□ -1.7
CD44-219ENST00000525685 CCDC144AA2RUR9 1427 aa4.46□□□□□ -1.7
CD44-219ENST00000525685 RIMS2Q9UQ26 1411 aa4.46□□□□□ -1.7
CD44-219ENST00000525685 NWD1Q149M9 1564 aa4.45□□□□□ -1.7
CD44-219ENST00000525685 DNAJC9-AS1A6NH13 148 aa4.45□□□□□ -1.7
CD44-219ENST00000525685 AQP12BA6NM10 295 aa4.45□□□□□ -1.7
CD44-219ENST00000525685 H0YIZ8 118 aa4.45□□□□□ -1.7
CD44-219ENST00000525685 TMPRSS11DO60235 418 aa4.45□□□□□ -1.7
CD44-219ENST00000525685 WDR47O94967 919 aa4.45□□□□□ -1.7
CD44-219ENST00000525685 PRKCGP05129 697 aa4.45□□□□□ -1.7
CD44-219ENST00000525685 HNRNPCP07910 306 aaKnown RBP eCLIP4.45□□□□□ -1.7
CD44-219ENST00000525685 MYCLP12524 364 aaPredicted RBP4.45□□□□□ -1.7
CD44-219ENST00000525685 JUPP14923 745 aa4.45□□□□□ -1.7
CD44-219ENST00000525685 MST1P26927 711 aa4.45□□□□□ -1.7
CD44-219ENST00000525685 CTGFP29279 349 aa4.45□□□□□ -1.7
CD44-219ENST00000525685 AKT1P31749 480 aa4.45□□□□□ -1.7
CD44-219ENST00000525685 CHKAP35790 457 aa4.45□□□□□ -1.7
CD44-219ENST00000525685 DGKQP52824 942 aa4.45□□□□□ -1.7
CD44-219ENST00000525685 COPB1P53618 953 aaKnown RBP4.45□□□□□ -1.7
CD44-219ENST00000525685 TXNL4AP83876 142 aaKnown RBP4.45□□□□□ -1.7
CD44-219ENST00000525685 ATP1A4Q13733 1029 aa4.45□□□□□ -1.7
CD44-219ENST00000525685 SPARCL1Q14515 664 aa4.45□□□□□ -1.7
CD44-219ENST00000525685 CLCA4Q14CN2 919 aa4.45□□□□□ -1.7
CD44-219ENST00000525685 ZACNQ401N2 412 aa4.45□□□□□ -1.7
CD44-219ENST00000525685 TMTC4Q5T4D3 741 aa4.45□□□□□ -1.7
CD44-219ENST00000525685 GORABQ5T7V8 394 aa4.45□□□□□ -1.7
CD44-219ENST00000525685 ABLIM2Q6H8Q1 611 aa4.45□□□□□ -1.7
CD44-219ENST00000525685 CEP85Q6P2H3 762 aa4.45□□□□□ -1.7
CD44-219ENST00000525685 SERPINA13PQ6UXR4 307 aa4.45□□□□□ -1.7
CD44-219ENST00000525685 PTCHD4Q6ZW05 846 aa4.45□□□□□ -1.7
CD44-219ENST00000525685 KRT27Q7Z3Y8 459 aa4.45□□□□□ -1.7
CD44-219ENST00000525685 CCDC117Q8IWD4 279 aaPredicted RBP4.45□□□□□ -1.7
CD44-219ENST00000525685 METTL25Q8N6Q8 603 aa4.45□□□□□ -1.7
CD44-219ENST00000525685 WDR60Q8WVS4 1066 aa4.45□□□□□ -1.7
CD44-219ENST00000525685 RUBCNQ92622 972 aa4.45□□□□□ -1.7
CD44-219ENST00000525685 DAZAP1Q96EP5 407 aaKnown RBP4.45□□□□□ -1.7
CD44-219ENST00000525685 POLR3GLQ9BT43 218 aa4.45□□□□□ -1.7
CD44-219ENST00000525685 DACT1Q9NYF0 836 aa4.45□□□□□ -1.7
CD44-219ENST00000525685 LPAR3Q9UBY5 353 aa4.45□□□□□ -1.7
CD44-219ENST00000525685 CA14Q9ULX7 337 aa4.45□□□□□ -1.7
CD44-219ENST00000525685 SPATA31E1Q6ZUB1 1445 aa4.45□□□□□ -1.7
CD44-219ENST00000525685 STRCP1A6NGW2 1772 aa4.45□□□□□ -1.7
CD44-219ENST00000525685 DIP2AQ14689 1571 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms