RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 FAM3CQ92520 227 aa12.86□□□□□ -0.35
CCS-202ENST00000525435 CNPY3Q9BT09 278 aa12.86□□□□□ -0.35
CCS-202ENST00000525435 WDCPQ9H6R7 721 aa12.86□□□□□ -0.35
CCS-202ENST00000525435 GRPEL1Q9HAV7 217 aa12.86□□□□□ -0.35
CCS-202ENST00000525435 METTL5Q9NRN9 209 aaKnown RBP12.86□□□□□ -0.35
CCS-202ENST00000525435 CNOT8Q9UFF9 292 aaKnown RBP12.86□□□□□ -0.35
CCS-202ENST00000525435 INTUQ9ULD6 942 aa12.86□□□□□ -0.35
CCS-202ENST00000525435 CA14Q9ULX7 337 aa12.86□□□□□ -0.35
CCS-202ENST00000525435 A0A0A0MRY4 1105 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 SHISA7A6NL88 538 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 PRR33A8MZF0 331 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.85□□□□□ -0.35
CCS-202ENST00000525435 PENKP01210 267 aaPredicted RBP12.85□□□□□ -0.35
CCS-202ENST00000525435 CYBBP04839 570 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 CYP17A1P05093 508 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 CYP1A2P05177 515 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 H2AFZP0C0S5 128 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 ADH5P11766 374 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 GPD1P21695 349 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 RDXP35241 583 aaKnown RBP12.85□□□□□ -0.35
CCS-202ENST00000525435 SULT1E1P49888 294 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 GALCP54803 685 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 GSDMDP57764 484 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 PITX1P78337 314 aaPredicted RBP12.85□□□□□ -0.35
CCS-202ENST00000525435 DEUP1Q05D60 604 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 GFPT1Q06210 699 aaPredicted RBP12.85□□□□□ -0.35
CCS-202ENST00000525435 NME3Q13232 169 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 ACAP1Q15027 740 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 MPPE1Q53F39 396 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 TRNP1Q6NT89 227 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 TPRG1Q6ZUI0 275 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 NUDT18Q6ZVK8 323 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 H2AFVQ71UI9 128 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 TMEM25Q86YD3 366 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 SYNPOQ8N3V7 929 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 EMC1Q8N766 993 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 JOSD2Q8TAC2 188 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 RNF34Q969K3 372 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 PBXIP1Q96AQ6 731 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 ZNF653Q96CK0 615 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 TMA16Q96EY4 203 aaKnown RBP12.85□□□□□ -0.35
CCS-202ENST00000525435 C1orf74Q96LT6 269 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 HAPLN3Q96S86 360 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 TBCBQ99426 244 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 SLC2A11Q9BYW1 496 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 MFSD1Q9H3U5 465 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 ARHGEF38Q9NXL2 777 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 LCMT1Q9UIC8 334 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 TECTAO75443 2155 aa12.85□□□□□ -0.35
CCS-202ENST00000525435 LCA5LO95447 670 aa12.84□□□□□ -0.35
CCS-202ENST00000525435 DRD1P21728 446 aa12.84□□□□□ -0.35
CCS-202ENST00000525435 CYLC1P35663 651 aaPredicted RBP12.84□□□□□ -0.35
CCS-202ENST00000525435 MAGEA9P43362 315 aa12.84□□□□□ -0.35
CCS-202ENST00000525435 MRE11P49959 708 aa12.84□□□□□ -0.35
CCS-202ENST00000525435 AIF1P55008 147 aa12.84□□□□□ -0.35
CCS-202ENST00000525435 RPL7AP62424 266 aaKnown RBP12.84□□□□□ -0.35
CCS-202ENST00000525435 GRSF1Q12849 480 aaKnown RBP eCLIP12.84□□□□□ -0.35
CCS-202ENST00000525435 GAB4Q2WGN9 574 aa12.84□□□□□ -0.35
CCS-202ENST00000525435 ARL13BQ3SXY8 428 aa12.84□□□□□ -0.35
CCS-202ENST00000525435 TMEM196Q5HYL7 178 aa12.84□□□□□ -0.35
CCS-202ENST00000525435 TMEM31Q5JXX7 168 aa12.84□□□□□ -0.35
CCS-202ENST00000525435 DGKKQ5KSL6 1271 aa12.84□□□□□ -0.35
CCS-202ENST00000525435 IER5LQ5T953 404 aa12.84□□□□□ -0.35
CCS-202ENST00000525435 OTUD1Q5VV17 481 aaPredicted RBP12.84□□□□□ -0.35
CCS-202ENST00000525435 PHLDB2Q86SQ0 1253 aa12.84□□□□□ -0.35
CCS-202ENST00000525435 ZNF687Q8N1G0 1237 aa12.84□□□□□ -0.35
CCS-202ENST00000525435 FBXL6Q8N531 539 aa12.84□□□□□ -0.35
CCS-202ENST00000525435 ZNF557Q8N988 423 aaPredicted RBP12.84□□□□□ -0.35
CCS-202ENST00000525435 CLDN23Q96B33 292 aa12.84□□□□□ -0.35
CCS-202ENST00000525435 CFAP57Q96MR6 1250 aa12.84□□□□□ -0.35
CCS-202ENST00000525435 MCEEQ96PE7 176 aa12.84□□□□□ -0.35
CCS-202ENST00000525435 XPO6Q96QU8 1125 aaKnown RBP12.84□□□□□ -0.35
CCS-202ENST00000525435 P2RY13Q9BPV8 354 aa12.84□□□□□ -0.35
CCS-202ENST00000525435 BBS2Q9BXC9 721 aa12.84□□□□□ -0.35
CCS-202ENST00000525435 TBC1D17Q9HA65 648 aa12.84□□□□□ -0.35
CCS-202ENST00000525435 LUC7LQ9NQ29 371 aaKnown RBP12.84□□□□□ -0.35
CCS-202ENST00000525435 PIGVQ9NUD9 493 aa12.84□□□□□ -0.35
CCS-202ENST00000525435 UVRAGQ9P2Y5 699 aa12.84□□□□□ -0.35
CCS-202ENST00000525435 FBXO10Q9UK96 956 aa12.84□□□□□ -0.35
CCS-202ENST00000525435 SIT1Q9Y3P8 196 aa12.84□□□□□ -0.35
CCS-202ENST00000525435 TRIOO75962 3097 aa12.84□□□□□ -0.35
CCS-202ENST00000525435 FAM170BA6NMN3 283 aa12.83□□□□□ -0.36
CCS-202ENST00000525435 STK25O00506 426 aa12.83□□□□□ -0.36
CCS-202ENST00000525435 SCAMP3O14828 347 aaKnown RBP12.83□□□□□ -0.36
CCS-202ENST00000525435 CACNG3O60359 315 aa12.83□□□□□ -0.36
CCS-202ENST00000525435 TMEM253P0C7T8 217 aa12.83□□□□□ -0.36
CCS-202ENST00000525435 TYRP14679 529 aa12.83□□□□□ -0.36
CCS-202ENST00000525435 ADRA1BP35368 520 aa12.83□□□□□ -0.36
CCS-202ENST00000525435 GALK1P51570 392 aa12.83□□□□□ -0.36
CCS-202ENST00000525435 NUBP1P53384 320 aa12.83□□□□□ -0.36
CCS-202ENST00000525435 ATP11AP98196 1134 aa12.83□□□□□ -0.36
CCS-202ENST00000525435 TCEAL1Q15170 157 aa12.83□□□□□ -0.36
CCS-202ENST00000525435 SPA17Q15506 151 aa12.83□□□□□ -0.36
CCS-202ENST00000525435 ANO4Q32M45 955 aa12.83□□□□□ -0.36
CCS-202ENST00000525435 FBXO43Q4G163 708 aa12.83□□□□□ -0.36
CCS-202ENST00000525435 FAM133BQ5BKY9 247 aaKnown RBP12.83□□□□□ -0.36
CCS-202ENST00000525435 MS4A13Q5J8X5 152 aa12.83□□□□□ -0.36
CCS-202ENST00000525435 PIK3R6Q5UE93 754 aa12.83□□□□□ -0.36
CCS-202ENST00000525435 RNF43Q68DV7 783 aa12.83□□□□□ -0.36
CCS-202ENST00000525435 ASTLQ6HA08 431 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms