RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 C2CD6Q53TS8 623 aa13.46□□□□□ -0.25
CTSB-209ENST00000525315 FAM133BQ5BKY9 247 aaKnown RBP13.46□□□□□ -0.25
CTSB-209ENST00000525315 SFMBT2Q5VUG0 894 aa13.46□□□□□ -0.25
CTSB-209ENST00000525315 NADSYN1Q6IA69 706 aa13.46□□□□□ -0.25
CTSB-209ENST00000525315 SFTPA1Q8IWL2 248 aa13.46□□□□□ -0.25
CTSB-209ENST00000525315 OLIG1Q8TAK6 271 aa13.46□□□□□ -0.25
CTSB-209ENST00000525315 KCNV2Q8TDN2 545 aa13.46□□□□□ -0.25
CTSB-209ENST00000525315 USP33Q8TEY7 942 aa13.46□□□□□ -0.25
CTSB-209ENST00000525315 ATOH1Q92858 354 aaPredicted RBP13.46□□□□□ -0.25
CTSB-209ENST00000525315 IQCDQ96DY2 449 aa13.46□□□□□ -0.25
CTSB-209ENST00000525315 TMA16Q96EY4 203 aaKnown RBP13.46□□□□□ -0.25
CTSB-209ENST00000525315 NPY6RQ99463 290 aa13.46□□□□□ -0.25
CTSB-209ENST00000525315 ARHGEF4Q9NR80 690 aa13.46□□□□□ -0.25
CTSB-209ENST00000525315 DNAJC17Q9NVM6 304 aaKnown RBP13.46□□□□□ -0.25
CTSB-209ENST00000525315 TMEM51Q9NW97 253 aa13.46□□□□□ -0.25
CTSB-209ENST00000525315 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.46□□□□□ -0.25
CTSB-209ENST00000525315 PLK2Q9NYY3 685 aa13.46□□□□□ -0.25
CTSB-209ENST00000525315 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.46□□□□□ -0.25
CTSB-209ENST00000525315 STARD13Q9Y3M8 1113 aa13.46□□□□□ -0.25
CTSB-209ENST00000525315 GOLGA6L7A0A1B0GV03 622 aa13.45□□□□□ -0.26
CTSB-209ENST00000525315 TBC1D3BA6NDS4 549 aa13.45□□□□□ -0.26
CTSB-209ENST00000525315 ANTXRLA6NF34 631 aa13.45□□□□□ -0.26
CTSB-209ENST00000525315 K7ESF4 209 aa13.45□□□□□ -0.26
CTSB-209ENST00000525315 CYBBP04839 570 aa13.45□□□□□ -0.26
CTSB-209ENST00000525315 SLC2A3P11169 496 aa13.45□□□□□ -0.26
CTSB-209ENST00000525315 TNFAIP3P21580 790 aa13.45□□□□□ -0.26
CTSB-209ENST00000525315 HOXA6P31267 233 aa13.45□□□□□ -0.26
CTSB-209ENST00000525315 SLC6A4P31645 630 aa13.45□□□□□ -0.26
CTSB-209ENST00000525315 NBL1P41271 181 aa13.45□□□□□ -0.26
CTSB-209ENST00000525315 GSCP56915 257 aaPredicted RBP13.45□□□□□ -0.26
CTSB-209ENST00000525315 RNASE9P60153 205 aaKnown RBP13.45□□□□□ -0.26
CTSB-209ENST00000525315 KDSRQ06136 332 aa13.45□□□□□ -0.26
CTSB-209ENST00000525315 PPP2R5DQ14738 602 aa13.45□□□□□ -0.26
CTSB-209ENST00000525315 ASIC2Q16515 512 aa13.45□□□□□ -0.26
CTSB-209ENST00000525315 ZC3H12AQ5D1E8 599 aaKnown RBP13.45□□□□□ -0.26
CTSB-209ENST00000525315 MPP7Q5T2T1 576 aa13.45□□□□□ -0.26
CTSB-209ENST00000525315 PIK3R6Q5UE93 754 aa13.45□□□□□ -0.26
CTSB-209ENST00000525315 E4F1Q66K89 784 aaPredicted RBP13.45□□□□□ -0.26
CTSB-209ENST00000525315 RNF43Q68DV7 783 aa13.45□□□□□ -0.26
CTSB-209ENST00000525315 GRAMD4Q6IC98 578 aa13.45□□□□□ -0.26
CTSB-209ENST00000525315 ACAD10Q6JQN1 1059 aa13.45□□□□□ -0.26
CTSB-209ENST00000525315 MMS22LQ6ZRQ5 1243 aa13.45□□□□□ -0.26
CTSB-209ENST00000525315 NUDT18Q6ZVK8 323 aa13.45□□□□□ -0.26
CTSB-209ENST00000525315 BNIPLQ7Z465 357 aa13.45□□□□□ -0.26
CTSB-209ENST00000525315 TERB1Q8NA31 727 aa13.45□□□□□ -0.26
CTSB-209ENST00000525315 RPLP0P6Q8NHW5 317 aa13.45□□□□□ -0.26
CTSB-209ENST00000525315 DDI1Q8WTU0 396 aa13.45□□□□□ -0.26
CTSB-209ENST00000525315 SYN2Q92777 582 aaPredicted RBP13.45□□□□□ -0.26
CTSB-209ENST00000525315 PGAP3Q96FM1 320 aaPredicted RBP13.45□□□□□ -0.26
CTSB-209ENST00000525315 BTN2A3PQ96KV6 586 aa13.45□□□□□ -0.26
CTSB-209ENST00000525315 DDX50Q9BQ39 737 aaKnown RBP13.45□□□□□ -0.26
CTSB-209ENST00000525315 FAM126AQ9BYI3 521 aaPredicted RBP13.45□□□□□ -0.26
CTSB-209ENST00000525315 SLC2A11Q9BYW1 496 aa13.45□□□□□ -0.26
CTSB-209ENST00000525315 ADAM33Q9BZ11 813 aa13.45□□□□□ -0.26
CTSB-209ENST00000525315 XPO4Q9C0E2 1151 aaKnown RBP13.45□□□□□ -0.26
CTSB-209ENST00000525315 NUCKS1Q9H1E3 243 aaKnown RBP13.45□□□□□ -0.26
CTSB-209ENST00000525315 CALCOCO1Q9P1Z2 691 aa13.45□□□□□ -0.26
CTSB-209ENST00000525315 CAPN11Q9UMQ6 739 aa13.45□□□□□ -0.26
CTSB-209ENST00000525315 SLC27A6Q9Y2P4 619 aa13.45□□□□□ -0.26
CTSB-209ENST00000525315 VPS13AQ96RL7 3174 aa13.45□□□□□ -0.26
CTSB-209ENST00000525315 ITIH6Q6UXX5 1313 aa13.44□□□□□ -0.26
CTSB-209ENST00000525315 DOCK4Q8N1I0 1966 aa13.44□□□□□ -0.26
CTSB-209ENST00000525315 PROB1E7EW31 1015 aa13.44□□□□□ -0.26
CTSB-209ENST00000525315 TSPAN3O60637 253 aa13.44□□□□□ -0.26
CTSB-209ENST00000525315 HOXD9P28356 352 aaPredicted RBP13.44□□□□□ -0.26
CTSB-209ENST00000525315 CCR1P32246 355 aa13.44□□□□□ -0.26
CTSB-209ENST00000525315 NSFP46459 744 aaKnown RBP13.44□□□□□ -0.26
CTSB-209ENST00000525315 DGKGP49619 791 aa13.44□□□□□ -0.26
CTSB-209ENST00000525315 NRLP54845 237 aa13.44□□□□□ -0.26
CTSB-209ENST00000525315 ZBED6P86452 979 aa13.44□□□□□ -0.26
CTSB-209ENST00000525315 SLC25A52Q3SY17 297 aa13.44□□□□□ -0.26
CTSB-209ENST00000525315 HSF5Q4G112 596 aaPredicted RBP13.44□□□□□ -0.26
CTSB-209ENST00000525315 C2orf27AQ580R0 203 aa13.44□□□□□ -0.26
CTSB-209ENST00000525315 FAM102AQ5T9C2 384 aaPredicted RBP13.44□□□□□ -0.26
CTSB-209ENST00000525315 EMC10Q5UCC4 262 aa13.44□□□□□ -0.26
CTSB-209ENST00000525315 OTUD1Q5VV17 481 aaPredicted RBP13.44□□□□□ -0.26
CTSB-209ENST00000525315 TRNP1Q6NT89 227 aa13.44□□□□□ -0.26
CTSB-209ENST00000525315 TSSK4Q6SA08 328 aa13.44□□□□□ -0.26
CTSB-209ENST00000525315 SYT13Q7L8C5 426 aa13.44□□□□□ -0.26
CTSB-209ENST00000525315 ZNF571Q7Z3V5 609 aaPredicted RBP13.44□□□□□ -0.26
CTSB-209ENST00000525315 ATP6V0D2Q8N8Y2 350 aa13.44□□□□□ -0.26
CTSB-209ENST00000525315 ZBTB44Q8NCP5 570 aa13.44□□□□□ -0.26
CTSB-209ENST00000525315 BHMTQ93088 406 aa13.44□□□□□ -0.26
CTSB-209ENST00000525315 C11orf70Q9BRQ4 267 aa13.44□□□□□ -0.26
CTSB-209ENST00000525315 HAUS4Q9H6D7 363 aa13.44□□□□□ -0.26
CTSB-209ENST00000525315 FAM204AQ9H8W3 233 aa13.44□□□□□ -0.26
CTSB-209ENST00000525315 DDIT4Q9NX09 232 aa13.44□□□□□ -0.26
CTSB-209ENST00000525315 ZSCAN32Q9NX65 697 aa13.44□□□□□ -0.26
CTSB-209ENST00000525315 ADAM22Q9P0K1 906 aa13.44□□□□□ -0.26
CTSB-209ENST00000525315 SLC12A6Q9UHW9 1150 aa13.44□□□□□ -0.26
CTSB-209ENST00000525315 HCN2Q9UL51 889 aa13.44□□□□□ -0.26
CTSB-209ENST00000525315 CLEC4EQ9ULY5 219 aa13.44□□□□□ -0.26
CTSB-209ENST00000525315 TCRBV5S1A1TA0A578 114 aa13.43□□□□□ -0.26
CTSB-209ENST00000525315 FAM170AA1A519 330 aa13.43□□□□□ -0.26
CTSB-209ENST00000525315 PRRT4C9JH25 899 aa13.43□□□□□ -0.26
CTSB-209ENST00000525315 GOLGA8SH3BPF8 625 aa13.43□□□□□ -0.26
CTSB-209ENST00000525315 M0QYT0 321 aa13.43□□□□□ -0.26
CTSB-209ENST00000525315 CBFA2T2O43439 604 aa13.43□□□□□ -0.26
CTSB-209ENST00000525315 ENDOD1O94919 500 aa13.43□□□□□ -0.26
CTSB-209ENST00000525315 F9P00740 461 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms