RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 CCDC185Q8N715 623 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 NETO2Q8NC67 525 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 C3orf20Q8ND61 904 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 WFDC5Q8TCV5 224 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 DDI1Q8WTU0 396 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 FAM172AQ8WUF8 416 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 FAM3CQ92520 227 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 EZH1Q92800 747 aaPredicted RBP4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 IRF7Q92985 503 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 PBXIP1Q96AQ6 731 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 E2F7Q96AV8 911 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 PLD4Q96BZ4 506 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 IQCDQ96DY2 449 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 SLC39A13Q96H72 371 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 PRICKLE1Q96MT3 831 aaPredicted RBP4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 SERPINB11Q96P15 392 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 PEBP4Q96S96 227 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 BAG1Q99933 345 aaPredicted RBP4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 NUP85Q9BW27 656 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 BBS2Q9BXC9 721 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 TKTL2Q9H0I9 626 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 GOLPH3Q9H4A6 298 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 ECT2Q9H8V3 914 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 ZWILCHQ9H900 591 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 TBC1D17Q9HA65 648 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 C11orf16Q9NQ32 467 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 ARHGEF3Q9NR81 526 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 SLC2A4RGQ9NR83 387 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 SPHK2Q9NRA0 654 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 KLHL11Q9NVR0 708 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 ASNSD1Q9NWL6 643 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 OBP2AQ9NY56 170 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 MPP6Q9NZW5 540 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 CTTNBP2NLQ9P2B4 639 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 PCSK1NQ9UHG2 260 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 NENFQ9UMX5 172 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 TLR6Q9Y2C9 796 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 REXO2Q9Y3B8 237 aaKnown RBP4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 BZW2Q9Y6E2 419 aaKnown RBP4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 DUSP10Q9Y6W6 482 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 MTCL1Q9Y4B5 1905 aaKnown RBP4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 SSU72P8A0A1W2PR75 194 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 ANKRD62A6NC57 917 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 TMEM191CA6NGB0 347 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 FAM170BA6NMN3 283 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 KCNU1A8MYU2 1149 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 CNTN5O94779 1100 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 NDUFA10O95299 355 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 NFATC1O95644 943 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 EGFP01133 1207 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 IGLV3-27P01718 113 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 APOEP02649 317 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 CYP1A2P05177 515 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 PTMAP06454 111 aaKnown RBP4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 GLI1P08151 1106 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 H2AFZP0C0S5 128 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 GZMAP12544 262 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 GLULP15104 373 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 TCF3P15923 654 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 PFKLP17858 780 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 TACR2P21452 398 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 TARSP26639 723 aaKnown RBP4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 SDC4P31431 198 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 CCR1P32246 355 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 GBP1P32455 592 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 CTHP32929 405 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 RDXP35241 583 aaKnown RBP4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 OPRD1P41143 372 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 MAGEA1P43355 309 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 PXNP49023 591 aaPredicted RBP4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 SLC11A2P49281 568 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 MRE11P49959 708 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 HDAC4P56524 1084 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 PFKPQ01813 784 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 EIF4EBP2Q13542 120 aaPredicted RBP4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 MESDQ14696 234 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 PDGFRLQ15198 375 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 LLGL1Q15334 1064 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 SMTNL2Q2TAL5 461 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 ATP13A4Q4VNC1 1196 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 FAM133BQ5BKY9 247 aaKnown RBP4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 FSCBQ5H9T9 825 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 KCNT1Q5JUK3 1230 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 FYB2Q5VWT5 728 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 CWF19L1Q69YN2 538 aaKnown RBP4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 FSTL4Q6MZW2 842 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 PKN3Q6P5Z2 889 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 KLHDC10Q6PID8 442 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 H2AFVQ71UI9 128 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 TFAP2DQ7Z6R9 452 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 DDX42Q86XP3 938 aaKnown RBP eCLIP4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 ZDHHC17Q8IUH5 632 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 UBALD2Q8IYN6 164 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 CARNMT1Q8N4J0 409 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 CCDC33Q8N5R6 958 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 ATP6V0D2Q8N8Y2 350 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 OR52K2Q8NGK3 314 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 SORCS1Q8WY21 1168 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 CTNNBL1Q8WYA6 563 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms