RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 ARL13BQ3SXY8 428 aa12.15□□□□□ -0.46
PTPRK-216ENST00000524481 MICALL1Q8N3F8 863 aa12.15□□□□□ -0.46
PTPRK-216ENST00000524481 MPP5Q8N3R9 675 aa12.15□□□□□ -0.46
PTPRK-216ENST00000524481 CCDC63Q8NA47 563 aa12.15□□□□□ -0.46
PTPRK-216ENST00000524481 KLHDC9Q8NEP7 349 aa12.15□□□□□ -0.46
PTPRK-216ENST00000524481 SPOCK2Q92563 424 aa12.15□□□□□ -0.46
PTPRK-216ENST00000524481 ARHGEF4Q9NR80 690 aa12.15□□□□□ -0.46
PTPRK-216ENST00000524481 CDH9Q9ULB4 789 aa12.15□□□□□ -0.46
PTPRK-216ENST00000524481 RRP15Q9Y3B9 282 aaKnown RBP12.15□□□□□ -0.46
PTPRK-216ENST00000524481 FAM169AQ9Y6X4 670 aa12.15□□□□□ -0.46
PTPRK-216ENST00000524481 H3BRJ5 948 aa12.15□□□□□ -0.46
PTPRK-216ENST00000524481 ALDH2P05091 517 aa12.15□□□□□ -0.46
PTPRK-216ENST00000524481 PHBP35232 272 aa12.15□□□□□ -0.46
PTPRK-216ENST00000524481 PTK7Q13308 1070 aa12.15□□□□□ -0.46
PTPRK-216ENST00000524481 CLLU1OSQ5K130 101 aa12.15□□□□□ -0.46
PTPRK-216ENST00000524481 LRRC8DQ7L1W4 858 aa12.15□□□□□ -0.46
PTPRK-216ENST00000524481 SLCO2A1Q92959 643 aa12.15□□□□□ -0.46
PTPRK-216ENST00000524481 COLEC11Q9BWP8 271 aa12.15□□□□□ -0.46
PTPRK-216ENST00000524481 DMAP1Q9NPF5 467 aaPredicted RBP12.15□□□□□ -0.46
PTPRK-216ENST00000524481 C5orf42Q9H799 3197 aa12.15□□□□□ -0.47
PTPRK-216ENST00000524481 RNF103O00237 685 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 FKTNO75072 461 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 SLC5A3P53794 718 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 MROH9Q5TGP6 573 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 HHATQ5VTY9 493 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 PRSS55Q6UWB4 352 aaPredicted RBP12.14□□□□□ -0.47
PTPRK-216ENST00000524481 PCGF5Q86SE9 256 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 ZDHHC17Q8IUH5 632 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 ATP11CQ8NB49 1132 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 HTR3CQ8WXA8 447 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 P2RY11Q96G91 374 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 GPR62Q9BZJ7 368 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 LRRC37A2A6NM11 1700 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 TET1Q8NFU7 2136 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 GABRDO14764 452 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 UGT1A9O60656 530 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 FYNP06241 537 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 PSMB4P28070 264 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 GPX6P59796 221 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 GRIK3Q13003 919 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 DUSP4Q13115 394 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 DNAJC3Q13217 504 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 STAT4Q14765 748 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 INTS6LQ5JSJ4 861 aaKnown RBP12.14□□□□□ -0.47
PTPRK-216ENST00000524481 PRPF39Q86UA1 669 aaKnown RBP12.14□□□□□ -0.47
PTPRK-216ENST00000524481 TMEM86AQ8N2M4 240 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 STK32AQ8WU08 396 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 PAFAH2Q99487 392 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 FERMT1Q9BQL6 677 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 UGT1A7Q9HAW7 530 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 UGT1A10Q9HAW8 530 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 UGT1A8Q9HAW9 530 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 USP29Q9HBJ7 922 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 MTMR10Q9NXD2 777 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 PAK5Q9P286 719 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 SLC12A6Q9UHW9 1150 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 SPATA31D3P0C874 917 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 RPL9P32969 192 aaKnown RBP12.14□□□□□ -0.47
PTPRK-216ENST00000524481 SKOR1P84550 965 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 XKR4Q5GH76 650 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 GKAP1Q5VSY0 366 aaPredicted RBP12.14□□□□□ -0.47
PTPRK-216ENST00000524481 SPATA31D4Q6ZUB0 917 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 RFX8Q6ZV50 586 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 TAC4Q86UU9 113 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 TTC17Q96AE7 1141 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 PGM2Q96G03 612 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 SERPINB12Q96P63 405 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 RTP3Q9BQQ7 232 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 VANGL2Q9ULK5 521 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 ANK1P16157 1881 aa12.14□□□□□ -0.47
PTPRK-216ENST00000524481 A0A1W2PQH9 124 aa12.13□□□□□ -0.47
PTPRK-216ENST00000524481 TRDMT1O14717 391 aaKnown RBP12.13□□□□□ -0.47
PTPRK-216ENST00000524481 STK10O94804 968 aaKnown RBP12.13□□□□□ -0.47
PTPRK-216ENST00000524481 MT-ND3P03897 115 aa12.13□□□□□ -0.47
PTPRK-216ENST00000524481 ATP5DP30049 168 aa12.13□□□□□ -0.47
PTPRK-216ENST00000524481 RAB27AP51159 221 aa12.13□□□□□ -0.47
PTPRK-216ENST00000524481 MGAT3Q09327 533 aa12.13□□□□□ -0.47
PTPRK-216ENST00000524481 PCSK7Q16549 785 aa12.13□□□□□ -0.47
PTPRK-216ENST00000524481 FAM133BQ5BKY9 247 aaKnown RBP12.13□□□□□ -0.47
PTPRK-216ENST00000524481 ANKRD20A2Q5SQ80 823 aa12.13□□□□□ -0.47
PTPRK-216ENST00000524481 ANKRD20A1Q5TYW2 823 aa12.13□□□□□ -0.47
PTPRK-216ENST00000524481 ANKRD20A3Q5VUR7 823 aa12.13□□□□□ -0.47
PTPRK-216ENST00000524481 NCBP2-AS2Q69YL0 99 aa12.13□□□□□ -0.47
PTPRK-216ENST00000524481 DCLRE1AQ6PJP8 1040 aa12.13□□□□□ -0.47
PTPRK-216ENST00000524481 PAF1Q8N7H5 531 aa12.13□□□□□ -0.47
PTPRK-216ENST00000524481 NAT8LQ8N9F0 302 aa12.13□□□□□ -0.47
PTPRK-216ENST00000524481 CHMP6Q96FZ7 201 aa12.13□□□□□ -0.47
PTPRK-216ENST00000524481 FAXDC2Q96IV6 333 aa12.13□□□□□ -0.47
PTPRK-216ENST00000524481 IQCGQ9H095 443 aaKnown RBP12.13□□□□□ -0.47
PTPRK-216ENST00000524481 SAMD15Q9P1V8 674 aa12.13□□□□□ -0.47
PTPRK-216ENST00000524481 FNDC3AQ9Y2H6 1198 aaKnown RBP12.13□□□□□ -0.47
PTPRK-216ENST00000524481 WDR27A2RRH5 827 aa12.13□□□□□ -0.47
PTPRK-216ENST00000524481 BHMG1C9JSJ3 638 aaPredicted RBP12.13□□□□□ -0.47
PTPRK-216ENST00000524481 I6L893 689 aaPredicted RBP12.13□□□□□ -0.47
PTPRK-216ENST00000524481 RPA3P35244 121 aaPredicted RBP12.13□□□□□ -0.47
PTPRK-216ENST00000524481 PTPN9P43378 593 aa12.13□□□□□ -0.47
PTPRK-216ENST00000524481 TRMT10BQ6PF06 316 aaKnown RBP12.13□□□□□ -0.47
PTPRK-216ENST00000524481 TMEM173Q86WV6 379 aaPredicted RBP12.13□□□□□ -0.47
PTPRK-216ENST00000524481 CDKL3Q8IVW4 592 aaPredicted RBP12.13□□□□□ -0.47
PTPRK-216ENST00000524481 CACNA2D3Q8IZS8 1091 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms