RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	PHGDH	O43175	533 aa	Known RBP	4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	USO1	O60763	962 aa	Known RBP	4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	TOP3B	O95985	862 aa	Known RBP	4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	HNRNPC	P07910	306 aa	Known RBP eCLIP	4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	SNRPA1	P09661	255 aa	Known RBP	4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	FAM200B	P0CF97	657 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	MTHFD2	P13995	350 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	XBP1	P17861	261 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	ATIC	P31939	592 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	STAT1	P42224	750 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	NPTX2	P47972	431 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	PRELP	P51888	382 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	MEF2A	Q02078	507 aa	Predicted RBP	4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	DSC2	Q02487	901 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	IL10RA	Q13651	578 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	SPARCL1	Q14515	664 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	KRT32	Q14532	448 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	ARL13B	Q3SXY8	428 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	VWA1	Q6PCB0	445 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	YTHDF3	Q7Z739	585 aa	Known RBP	4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	MOGAT3	Q86VF5	341 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	NRSN1	Q8IZ57	195 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	REPS2	Q8NFH8	660 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	STT3B	Q8TCJ2	826 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	MUL1	Q969V5	352 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	ASB2	Q96Q27	587 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	SDF4	Q9BRK5	362 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	PYM1	Q9BRP8	204 aa	Known RBP	4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	CDK19	Q9BWU1	502 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	AGXT2	Q9BYV1	514 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	SEMA4C	Q9C0C4	833 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	ZNF287	Q9HBT7	754 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	PLSCR4	Q9NRQ2	329 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	TBC1D29	Q9UFV1	150 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	DPP7	Q9UHL4	492 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	ZNF112	Q9UJU3	913 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	TMPRSS11E	Q9UL52	423 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	OGDHL	Q9ULD0	1010 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	SLC39A10	Q9ULF5	831 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	MTO1	Q9Y2Z2	717 aa	Known RBP	4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	NOTCH4	Q99466	2003 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	PEAK1	Q9H792	1746 aa		4.77	□□□□□ -1.65
PCM1-223	ENST00000524356	ALS2	Q96Q42	1657 aa		4.77	□□□□□ -1.65
PCM1-223	ENST00000524356	IGKV2D-30	A0A075B6S6	120 aa		4.77	□□□□□ -1.65
PCM1-223	ENST00000524356	PRSS38	A1L453	326 aa		4.77	□□□□□ -1.65
PCM1-223	ENST00000524356	FAM234B	A2RU67	622 aa		4.77	□□□□□ -1.65
PCM1-223	ENST00000524356	LRRC14B	A6NHZ5	514 aa		4.77	□□□□□ -1.65
PCM1-223	ENST00000524356	MYO1F	O00160	1098 aa		4.77	□□□□□ -1.65
PCM1-223	ENST00000524356	ZBED4	O75132	1171 aa		4.77	□□□□□ -1.65
PCM1-223	ENST00000524356	ERN1	O75460	977 aa	Known RBP	4.77	□□□□□ -1.65
PCM1-223	ENST00000524356	ARIH2	O95376	493 aa		4.77	□□□□□ -1.65
PCM1-223	ENST00000524356	BRAF	P15056	766 aa		4.77	□□□□□ -1.65
PCM1-223	ENST00000524356	CRHR1	P34998	444 aa		4.77	□□□□□ -1.65
PCM1-223	ENST00000524356	CTNNA1	P35221	906 aa	Known RBP	4.77	□□□□□ -1.65
PCM1-223	ENST00000524356	ZNF134	P52741	427 aa		4.77	□□□□□ -1.65
PCM1-223	ENST00000524356	HTRA4	P83105	476 aa	Predicted RBP	4.77	□□□□□ -1.65
PCM1-223	ENST00000524356	FMO1	Q01740	532 aa		4.77	□□□□□ -1.65
PCM1-223	ENST00000524356	TRIM25	Q14258	630 aa	Known RBP	4.77	□□□□□ -1.65
PCM1-223	ENST00000524356	PLCB4	Q15147	1175 aa		4.77	□□□□□ -1.65
PCM1-223	ENST00000524356	CNGA2	Q16280	664 aa		4.77	□□□□□ -1.65
PCM1-223	ENST00000524356	TMEM119	Q4V9L6	283 aa		4.77	□□□□□ -1.65
PCM1-223	ENST00000524356	CCDC129	Q6ZRS4	1044 aa		4.77	□□□□□ -1.65
PCM1-223	ENST00000524356	TOM1L2	Q6ZVM7	507 aa		4.77	□□□□□ -1.65
PCM1-223	ENST00000524356	ZNF566	Q969W8	418 aa		4.77	□□□□□ -1.65
PCM1-223	ENST00000524356	ATP6V1E2	Q96A05	226 aa		4.77	□□□□□ -1.65
PCM1-223	ENST00000524356	RAX2	Q96IS3	184 aa		4.77	□□□□□ -1.65
PCM1-223	ENST00000524356	MAEL	Q96JY0	434 aa	Known RBP	4.77	□□□□□ -1.65
PCM1-223	ENST00000524356	FAM167B	Q9BTA0	163 aa		4.77	□□□□□ -1.65
PCM1-223	ENST00000524356	KATNAL1	Q9BW62	490 aa		4.77	□□□□□ -1.65
PCM1-223	ENST00000524356	SPRTN	Q9H040	489 aa	Predicted RBP	4.77	□□□□□ -1.65
PCM1-223	ENST00000524356	IRAK4	Q9NWZ3	460 aa		4.77	□□□□□ -1.65
PCM1-223	ENST00000524356	KIF17	Q9P2E2	1029 aa		4.77	□□□□□ -1.65
PCM1-223	ENST00000524356	CEP83	Q9Y592	693 aa		4.77	□□□□□ -1.65
PCM1-223	ENST00000524356	PIK3C2G	O75747	1445 aa		4.77	□□□□□ -1.65
PCM1-223	ENST00000524356	ATRNL1	Q5VV63	1379 aa		4.77	□□□□□ -1.65
PCM1-223	ENST00000524356		A0A0B4J269	797 aa		4.76	□□□□□ -1.65
PCM1-223	ENST00000524356	OVOS2	A0A0G2JMS6	1433 aa		4.76	□□□□□ -1.65
PCM1-223	ENST00000524356	OVOS2	A0A0J9YW53	1432 aa		4.76	□□□□□ -1.65
PCM1-223	ENST00000524356	SMTNL1	A8MU46	457 aa		4.76	□□□□□ -1.65
PCM1-223	ENST00000524356		B4DLN1	442 aa		4.76	□□□□□ -1.65
PCM1-223	ENST00000524356	ADGRB2	O60241	1585 aa		4.76	□□□□□ -1.65
PCM1-223	ENST00000524356	DOK2	O60496	412 aa		4.76	□□□□□ -1.65
PCM1-223	ENST00000524356	TNFRSF6B	O95407	300 aa		4.76	□□□□□ -1.65
PCM1-223	ENST00000524356	KIT	P10721	976 aa		4.76	□□□□□ -1.65
PCM1-223	ENST00000524356	MTHFD1	P11586	935 aa	Known RBP	4.76	□□□□□ -1.65
PCM1-223	ENST00000524356	FGFR2	P21802	821 aa		4.76	□□□□□ -1.65
PCM1-223	ENST00000524356	SLC6A2	P23975	617 aa		4.76	□□□□□ -1.65
PCM1-223	ENST00000524356	MPG	P29372	298 aa		4.76	□□□□□ -1.65
PCM1-223	ENST00000524356	NR4A2	P43354	598 aa		4.76	□□□□□ -1.65
PCM1-223	ENST00000524356	CLNS1A	P54105	237 aa	Known RBP	4.76	□□□□□ -1.65
PCM1-223	ENST00000524356	CDK17	Q00537	523 aa		4.76	□□□□□ -1.65
PCM1-223	ENST00000524356	CCDC157	Q569K6	752 aa		4.76	□□□□□ -1.65
PCM1-223	ENST00000524356	OVOS2	Q6IE36	1432 aa		4.76	□□□□□ -1.65
PCM1-223	ENST00000524356	SULT6B1	Q6IMI4	303 aa		4.76	□□□□□ -1.65
PCM1-223	ENST00000524356	MEPCE	Q7L2J0	689 aa	Known RBP	4.76	□□□□□ -1.65
PCM1-223	ENST00000524356	ANKAR	Q7Z5J8	1434 aa		4.76	□□□□□ -1.65
PCM1-223	ENST00000524356	C2CD5	Q86YS7	1000 aa		4.76	□□□□□ -1.65
PCM1-223	ENST00000524356	TRMT2A	Q8IZ69	625 aa	Known RBP	4.76	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms