RNA–Protein interactions for RNA: ENST00000523814.5

SPIDR-221, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-221ENST00000523814 MKRN2Q9H000 416 aaKnown RBP17.54■□□□□ 0.4
SPIDR-221ENST00000523814 SFMBT1Q9UHJ3 866 aa17.54■□□□□ 0.4
SPIDR-221ENST00000523814 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.54■□□□□ 0.47e-6■■■■■ 27.7
SPIDR-221ENST00000523814 PCDHB4Q9Y5E5 795 aa17.54■□□□□ 0.4
SPIDR-221ENST00000523814 ATXN2Q99700 1313 aaKnown RBP17.53■□□□□ 0.4
SPIDR-221ENST00000523814 UPK3BL1B0FP48 263 aa17.53■□□□□ 0.4
SPIDR-221ENST00000523814 UPK3BL2E5RIL1 263 aa17.53■□□□□ 0.4
SPIDR-221ENST00000523814 NDUFS2O75306 463 aa17.53■□□□□ 0.4
SPIDR-221ENST00000523814 LCP1P13796 627 aa17.53■□□□□ 0.4
SPIDR-221ENST00000523814 HOXD9P28356 352 aaPredicted RBP17.53■□□□□ 0.4
SPIDR-221ENST00000523814 CD6P30203 668 aa17.53■□□□□ 0.4
SPIDR-221ENST00000523814 MAPK8P45983 427 aa17.53■□□□□ 0.4
SPIDR-221ENST00000523814 GCNT1Q02742 428 aa17.53■□□□□ 0.4
SPIDR-221ENST00000523814 SEMA3BQ13214 749 aa17.53■□□□□ 0.4
SPIDR-221ENST00000523814 MORC3Q14149 939 aa17.53■□□□□ 0.4
SPIDR-221ENST00000523814 ZNF234Q14588 700 aa17.53■□□□□ 0.4
SPIDR-221ENST00000523814 ST3GAL2Q16842 350 aa17.53■□□□□ 0.4
SPIDR-221ENST00000523814 TMEM215Q68D42 235 aa17.53■□□□□ 0.4
SPIDR-221ENST00000523814 MSANTD2Q6P1R3 559 aa17.53■□□□□ 0.4
SPIDR-221ENST00000523814 KIAA1324Q6UXG2 1013 aaKnown RBP17.53■□□□□ 0.4
SPIDR-221ENST00000523814 PPM1KQ8N3J5 372 aa17.53■□□□□ 0.4
SPIDR-221ENST00000523814 EHBP1Q8NDI1 1231 aa17.53■□□□□ 0.4
SPIDR-221ENST00000523814 NELFBQ8WX92 580 aa17.53■□□□□ 0.4
SPIDR-221ENST00000523814 FOXJ1Q92949 421 aa17.53■□□□□ 0.4
SPIDR-221ENST00000523814 KAT5Q92993 513 aa17.53■□□□□ 0.4
SPIDR-221ENST00000523814 TMA16Q96EY4 203 aaKnown RBP17.53■□□□□ 0.4
SPIDR-221ENST00000523814 HSPA12BQ96MM6 686 aa17.53■□□□□ 0.4
SPIDR-221ENST00000523814 CD93Q9NPY3 652 aa17.53■□□□□ 0.4
SPIDR-221ENST00000523814 USP36Q9P275 1121 aaKnown RBP17.53■□□□□ 0.4
SPIDR-221ENST00000523814 WASF3Q9UPY6 502 aa17.53■□□□□ 0.4
SPIDR-221ENST00000523814 BICDL2A1A5D9 508 aa17.52■□□□□ 0.4
SPIDR-221ENST00000523814 ARHGAP33O14559 1287 aa17.52■□□□□ 0.4
SPIDR-221ENST00000523814 SYNCRIPO60506 623 aaKnown RBP17.52■□□□□ 0.4
SPIDR-221ENST00000523814 NCAM1P13591 858 aa17.52■□□□□ 0.4
SPIDR-221ENST00000523814 SYCP2LQ5T4T6 812 aa17.52■□□□□ 0.4
SPIDR-221ENST00000523814 KLHL10Q6JEL2 608 aa17.52■□□□□ 0.4
SPIDR-221ENST00000523814 KIAA0907Q7Z7F0 614 aaPredicted RBP17.52■□□□□ 0.4
SPIDR-221ENST00000523814 PIP4P1Q86T03 277 aa17.52■□□□□ 0.4
SPIDR-221ENST00000523814 TMPRSS6Q8IU80 811 aa17.52■□□□□ 0.4
SPIDR-221ENST00000523814 TRIM59Q8IWR1 403 aa17.52■□□□□ 0.4
SPIDR-221ENST00000523814 HSFY1Q96LI6 401 aa17.52■□□□□ 0.4
SPIDR-221ENST00000523814 IRX2Q9BZI1 471 aaPredicted RBP17.52■□□□□ 0.4
SPIDR-221ENST00000523814 CIPCQ9C0C6 399 aa17.52■□□□□ 0.4
SPIDR-221ENST00000523814 WSB2Q9NYS7 404 aaPredicted RBP17.52■□□□□ 0.4
SPIDR-221ENST00000523814 NFE2L3Q9Y4A8 694 aa17.52■□□□□ 0.4
SPIDR-221ENST00000523814 MSI1O43347 362 aaKnown RBP17.51■□□□□ 0.39
SPIDR-221ENST00000523814 TSPAN3O60637 253 aa17.51■□□□□ 0.39
SPIDR-221ENST00000523814 KRT37O76014 449 aa17.51■□□□□ 0.39
SPIDR-221ENST00000523814 GNA14O95837 355 aa17.51■□□□□ 0.39
SPIDR-221ENST00000523814 IGLV3-19P01714 112 aa17.51■□□□□ 0.39
SPIDR-221ENST00000523814 IGLV3-27P01718 113 aa17.51■□□□□ 0.39
SPIDR-221ENST00000523814 C7P10643 843 aa17.51■□□□□ 0.39
SPIDR-221ENST00000523814 PRKCHP24723 683 aa17.51■□□□□ 0.39
SPIDR-221ENST00000523814 OXTRP30559 389 aa17.51■□□□□ 0.39
SPIDR-221ENST00000523814 RGS7P49802 495 aa17.51■□□□□ 0.39
SPIDR-221ENST00000523814 TPMTP51580 245 aa17.51■□□□□ 0.39
SPIDR-221ENST00000523814 ATXN3P54252 364 aaPredicted RBP17.51■□□□□ 0.39
SPIDR-221ENST00000523814 MARSP56192 900 aaKnown RBP17.51■□□□□ 0.39
SPIDR-221ENST00000523814 CACNA1BQ00975 2339 aa17.51■□□□□ 0.39
SPIDR-221ENST00000523814 RING1Q06587 406 aa17.51■□□□□ 0.39
SPIDR-221ENST00000523814 ZNF252P-AS1Q0IIN9 211 aa17.51■□□□□ 0.39
SPIDR-221ENST00000523814 MPP7Q5T2T1 576 aa17.51■□□□□ 0.39
SPIDR-221ENST00000523814 RRAGAQ7L523 313 aa17.51■□□□□ 0.39
SPIDR-221ENST00000523814 DEFB124Q8NES8 71 aa17.51■□□□□ 0.39
SPIDR-221ENST00000523814 CADM4Q8NFZ8 388 aa17.51■□□□□ 0.39
SPIDR-221ENST00000523814 SORCS1Q8WY21 1168 aa17.51■□□□□ 0.39
SPIDR-221ENST00000523814 DNASE2BQ8WZ79 361 aa17.51■□□□□ 0.39
SPIDR-221ENST00000523814 AZIN2Q96A70 460 aa17.51■□□□□ 0.39
SPIDR-221ENST00000523814 TOE1Q96GM8 510 aaKnown RBP17.51■□□□□ 0.39
SPIDR-221ENST00000523814 FSCN3Q9NQT6 498 aa17.51■□□□□ 0.39
SPIDR-221ENST00000523814 CNTN6Q9UQ52 1028 aa17.51■□□□□ 0.39
SPIDR-221ENST00000523814 PI4KAP42356 2102 aa17.5■□□□□ 0.39
SPIDR-221ENST00000523814 KCNJ18B7U540 433 aa17.5■□□□□ 0.39
SPIDR-221ENST00000523814 M0QYV0 167 aa17.5■□□□□ 0.39
SPIDR-221ENST00000523814 FBXO21O94952 628 aa17.5■□□□□ 0.39
SPIDR-221ENST00000523814 CALCAP01258 141 aa17.5■□□□□ 0.39
SPIDR-221ENST00000523814 SYPP08247 313 aa17.5■□□□□ 0.39
SPIDR-221ENST00000523814 BRD2P25440 801 aaKnown RBP17.5■□□□□ 0.39
SPIDR-221ENST00000523814 HLA-FP30511 346 aa17.5■□□□□ 0.39
SPIDR-221ENST00000523814 RPL34P49207 117 aaKnown RBP17.5■□□□□ 0.39
SPIDR-221ENST00000523814 COPAP53621 1224 aa17.5■□□□□ 0.39
SPIDR-221ENST00000523814 KCNH2Q12809 1159 aa17.5■□□□□ 0.39
SPIDR-221ENST00000523814 CAMK2GQ13555 558 aaPredicted RBP17.5■□□□□ 0.39
SPIDR-221ENST00000523814 WDR45BQ5MNZ6 344 aa17.5■□□□□ 0.39
SPIDR-221ENST00000523814 ADIPOR2Q86V24 386 aa17.5■□□□□ 0.39
SPIDR-221ENST00000523814 ARHGEF19Q8IW93 802 aa17.5■□□□□ 0.39
SPIDR-221ENST00000523814 UNC45BQ8IWX7 931 aa17.5■□□□□ 0.39
SPIDR-221ENST00000523814 RGL4Q8IZJ4 473 aa17.5■□□□□ 0.39
SPIDR-221ENST00000523814 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.5■□□□□ 0.39
SPIDR-221ENST00000523814 WFIKKN2Q8TEU8 576 aa17.5■□□□□ 0.39
SPIDR-221ENST00000523814 PRCCQ92733 491 aaPredicted RBP17.5■□□□□ 0.39
SPIDR-221ENST00000523814 SIPA1Q96FS4 1042 aa17.5■□□□□ 0.39
SPIDR-221ENST00000523814 KREMEN1Q96MU8 473 aa17.5■□□□□ 0.39
SPIDR-221ENST00000523814 GTPBP2Q9BX10 602 aaKnown RBP17.5■□□□□ 0.39
SPIDR-221ENST00000523814 TMEM245Q9H330 911 aa17.5■□□□□ 0.39
SPIDR-221ENST00000523814 SLC32A1Q9H598 525 aa17.5■□□□□ 0.39
SPIDR-221ENST00000523814 SUSD2Q9UGT4 822 aa17.5■□□□□ 0.39
SPIDR-221ENST00000523814 PLA2G4CQ9UP65 541 aa17.5■□□□□ 0.39
SPIDR-221ENST00000523814 MAP1BP46821 2468 aaKnown RBP17.5■□□□□ 0.39
SPIDR-221ENST00000523814 CEP192Q8TEP8 1941 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms