RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 SLCO1B1Q9Y6L6 691 aa16.13■□□□□ 0.17
MRPS28-209ENST00000522987 A0A1W2PQ27 194 aa16.12■□□□□ 0.17
MRPS28-209ENST00000522987 A0A1W2PQ64 194 aa16.12■□□□□ 0.17
MRPS28-209ENST00000522987 YJEFN3A6XGL0 299 aa16.12■□□□□ 0.17
MRPS28-209ENST00000522987 E7ENQ6 273 aa16.12■□□□□ 0.17
MRPS28-209ENST00000522987 ACADMP11310 421 aa16.12■□□□□ 0.17
MRPS28-209ENST00000522987 GNSP15586 552 aa16.12■□□□□ 0.17
MRPS28-209ENST00000522987 COPAP53621 1224 aa16.12■□□□□ 0.17
MRPS28-209ENST00000522987 BCAT1P54687 386 aa16.12■□□□□ 0.17
MRPS28-209ENST00000522987 SLC8A3P57103 927 aa16.12■□□□□ 0.17
MRPS28-209ENST00000522987 CUL2Q13617 745 aa16.12■□□□□ 0.17
MRPS28-209ENST00000522987 FNDC3BQ53EP0 1204 aaKnown RBP16.12■□□□□ 0.17
MRPS28-209ENST00000522987 SGO2Q562F6 1265 aa16.12■□□□□ 0.17
MRPS28-209ENST00000522987 WDR45BQ5MNZ6 344 aa16.12■□□□□ 0.17
MRPS28-209ENST00000522987 ANKRD40Q6AI12 368 aa16.12■□□□□ 0.17
MRPS28-209ENST00000522987 ZNF276Q8N554 614 aa16.12■□□□□ 0.17
MRPS28-209ENST00000522987 RNF139Q8WU17 664 aa16.12■□□□□ 0.17
MRPS28-209ENST00000522987 PRCCQ92733 491 aaPredicted RBP16.12■□□□□ 0.17
MRPS28-209ENST00000522987 FOXJ1Q92949 421 aa16.12■□□□□ 0.17
MRPS28-209ENST00000522987 PLD4Q96BZ4 506 aa16.12■□□□□ 0.17
MRPS28-209ENST00000522987 SCAND2PQ9GZW5 306 aaPredicted RBP16.12■□□□□ 0.17
MRPS28-209ENST00000522987 FAM124BQ9H5Z6 455 aaPredicted RBP16.12■□□□□ 0.17
MRPS28-209ENST00000522987 ITM2CQ9NQX7 267 aa16.12■□□□□ 0.17
MRPS28-209ENST00000522987 HESX1Q9UBX0 185 aa16.12■□□□□ 0.17
MRPS28-209ENST00000522987 EIF2B4Q9UI10 523 aaKnown RBP16.12■□□□□ 0.17
MRPS28-209ENST00000522987 PCDHB9Q9Y5E1 797 aa16.12■□□□□ 0.17
MRPS28-209ENST00000522987 GOLGA6L7A0A1B0GV03 622 aa16.11■□□□□ 0.17
MRPS28-209ENST00000522987 SRRM3A6NNA2 597 aaPredicted RBP16.11■□□□□ 0.17
MRPS28-209ENST00000522987 XPO1O14980 1071 aaKnown RBP16.11■□□□□ 0.17
MRPS28-209ENST00000522987 STX10O60499 249 aa16.11■□□□□ 0.17
MRPS28-209ENST00000522987 HOXD9P28356 352 aaPredicted RBP16.11■□□□□ 0.17
MRPS28-209ENST00000522987 ENPEPQ07075 957 aa16.11■□□□□ 0.17
MRPS28-209ENST00000522987 BST2Q10589 180 aaKnown RBP16.11■□□□□ 0.17
MRPS28-209ENST00000522987 BSPRYQ5W0U4 402 aa16.11■□□□□ 0.17
MRPS28-209ENST00000522987 RFWD3Q6PCD5 774 aa16.11■□□□□ 0.17
MRPS28-209ENST00000522987 CHST9Q7L1S5 443 aa16.11■□□□□ 0.17
MRPS28-209ENST00000522987 NAXDQ8IW45 347 aa16.11■□□□□ 0.17
MRPS28-209ENST00000522987 SIX6OS1Q8N1H7 587 aa16.11■□□□□ 0.17
MRPS28-209ENST00000522987 CPXM2Q8N436 756 aa16.11■□□□□ 0.17
MRPS28-209ENST00000522987 KDF1Q8NAX2 398 aaPredicted RBP16.11■□□□□ 0.17
MRPS28-209ENST00000522987 WFDC5Q8TCV5 224 aa16.11■□□□□ 0.17
MRPS28-209ENST00000522987 CLEC4CQ8WTT0 213 aa16.11■□□□□ 0.17
MRPS28-209ENST00000522987 TSG101Q99816 390 aa16.11■□□□□ 0.17
MRPS28-209ENST00000522987 MTG2Q9H4K7 406 aa16.11■□□□□ 0.17
MRPS28-209ENST00000522987 ABCB8Q9NUT2 735 aa16.11■□□□□ 0.17
MRPS28-209ENST00000522987 DNAAF2Q9NVR5 837 aaKnown RBP16.11■□□□□ 0.17
MRPS28-209ENST00000522987 SUSD2Q9UGT4 822 aa16.11■□□□□ 0.17
MRPS28-209ENST00000522987 NEUROG3Q9Y4Z2 214 aa16.11■□□□□ 0.17
MRPS28-209ENST00000522987 FAM208BQ5VWN6 2430 aa16.11■□□□□ 0.17
MRPS28-209ENST00000522987 CABIN1Q9Y6J0 2220 aa16.11■□□□□ 0.17
MRPS28-209ENST00000522987 ZFHX4Q86UP3 3567 aa16.11■□□□□ 0.17
MRPS28-209ENST00000522987 A0A1B0GTW7 788 aa16.1■□□□□ 0.17
MRPS28-209ENST00000522987 UPK3BL1B0FP48 263 aa16.1■□□□□ 0.17
MRPS28-209ENST00000522987 UPK3BL2E5RIL1 263 aa16.1■□□□□ 0.17
MRPS28-209ENST00000522987 GJB3O75712 270 aa16.1■□□□□ 0.17
MRPS28-209ENST00000522987 HLA-FP30511 346 aa16.1■□□□□ 0.17
MRPS28-209ENST00000522987 HARS2P49590 506 aaKnown RBP16.1■□□□□ 0.17
MRPS28-209ENST00000522987 BNC1Q01954 994 aa16.1■□□□□ 0.17
MRPS28-209ENST00000522987 ENPP2Q13822 863 aa16.1■□□□□ 0.17
MRPS28-209ENST00000522987 TRIP4Q15650 581 aaPredicted RBP16.1■□□□□ 0.17
MRPS28-209ENST00000522987 TRIP6Q15654 476 aaKnown RBP16.1■□□□□ 0.17
MRPS28-209ENST00000522987 MPPE1Q53F39 396 aa16.1■□□□□ 0.17
MRPS28-209ENST00000522987 PM20D1Q6GTS8 502 aa16.1■□□□□ 0.17
MRPS28-209ENST00000522987 LAYNQ6UX15 382 aa16.1■□□□□ 0.17
MRPS28-209ENST00000522987 TTC39CQ8N584 583 aa16.1■□□□□ 0.17
MRPS28-209ENST00000522987 RBBP8NLQ8NC74 664 aaPredicted RBP16.1■□□□□ 0.17
MRPS28-209ENST00000522987 SETD7Q8WTS6 366 aaKnown RBP16.1■□□□□ 0.17
MRPS28-209ENST00000522987 TFAP2BQ92481 460 aa16.1■□□□□ 0.17
MRPS28-209ENST00000522987 KAT5Q92993 513 aa16.1■□□□□ 0.17
MRPS28-209ENST00000522987 UBXN6Q9BZV1 441 aa16.1■□□□□ 0.17
MRPS28-209ENST00000522987 STIM2Q9P246 746 aa16.1■□□□□ 0.17
MRPS28-209ENST00000522987 DOCK9Q9BZ29 2069 aa16.1■□□□□ 0.17
MRPS28-209ENST00000522987 ZZEF1O43149 2961 aa16.1■□□□□ 0.17
MRPS28-209ENST00000522987 GOLGA4Q13439 2230 aaKnown RBP16.1■□□□□ 0.17
MRPS28-209ENST00000522987 A0A1B0GVT2 93 aa16.09■□□□□ 0.17
MRPS28-209ENST00000522987 GOLGA8CPA6NN73 597 aa16.09■□□□□ 0.17
MRPS28-209ENST00000522987 O00370 1275 aa16.09■□□□□ 0.17
MRPS28-209ENST00000522987 GABBR2O75899 941 aa16.09■□□□□ 0.17
MRPS28-209ENST00000522987 HOXB3P14651 431 aaPredicted RBP16.09■□□□□ 0.17
MRPS28-209ENST00000522987 BRD2P25440 801 aaKnown RBP16.09■□□□□ 0.17
MRPS28-209ENST00000522987 NUMBP49757 651 aa16.09■□□□□ 0.17
MRPS28-209ENST00000522987 TMEM270Q6UE05 265 aa16.09■□□□□ 0.17
MRPS28-209ENST00000522987 FAM217AQ8IXS0 508 aa16.09■□□□□ 0.17
MRPS28-209ENST00000522987 ZC3H3Q8IXZ2 948 aaKnown RBP16.09■□□□□ 0.17
MRPS28-209ENST00000522987 TMA16Q96EY4 203 aaKnown RBP16.09■□□□□ 0.17
MRPS28-209ENST00000522987 C6orf106Q9H6K1 298 aaPredicted RBP16.09■□□□□ 0.17
MRPS28-209ENST00000522987 GAREM1Q9H706 876 aa16.09■□□□□ 0.17
MRPS28-209ENST00000522987 OLA1Q9NTK5 396 aaKnown RBP16.09■□□□□ 0.17
MRPS28-209ENST00000522987 FNDC3AQ9Y2H6 1198 aaKnown RBP16.09■□□□□ 0.17
MRPS28-209ENST00000522987 MSRB2Q9Y3D2 182 aa16.09■□□□□ 0.17
MRPS28-209ENST00000522987 PCDHB4Q9Y5E5 795 aa16.09■□□□□ 0.17
MRPS28-209ENST00000522987 ADAMTS20P59510 1910 aa16.08■□□□□ 0.16
MRPS28-209ENST00000522987 METTL12A8MUP2 240 aa16.08■□□□□ 0.16
MRPS28-209ENST00000522987 RNF225M0QZC1 329 aaPredicted RBP16.08■□□□□ 0.16
MRPS28-209ENST00000522987 BCAT2O15382 392 aaPredicted RBP16.08■□□□□ 0.16
MRPS28-209ENST00000522987 TBL1XO60907 577 aa16.08■□□□□ 0.16
MRPS28-209ENST00000522987 FTH1P19P0C7X4 201 aa16.08■□□□□ 0.16
MRPS28-209ENST00000522987 VDRP11473 427 aa16.08■□□□□ 0.16
MRPS28-209ENST00000522987 CD70P32970 193 aa16.08■□□□□ 0.16
MRPS28-209ENST00000522987 ACSL1P33121 698 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms