RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 CC2D1AQ6P1N0 951 aaPredicted RBP12.41□□□□□ -0.42
PVT1-215ENST00000522963 MIB1Q86YT6 1006 aa12.41□□□□□ -0.42
PVT1-215ENST00000522963 FBXL6Q8N531 539 aa12.41□□□□□ -0.42
PVT1-215ENST00000522963 RNF10Q8N5U6 811 aaKnown RBP12.41□□□□□ -0.42
PVT1-215ENST00000522963 ARFGAP1Q8N6T3 406 aa12.41□□□□□ -0.42
PVT1-215ENST00000522963 NIPA2Q8N8Q9 360 aa12.41□□□□□ -0.42
PVT1-215ENST00000522963 CSGALNACT1Q8TDX6 532 aa12.41□□□□□ -0.42
PVT1-215ENST00000522963 FAM172AQ8WUF8 416 aa12.41□□□□□ -0.42
PVT1-215ENST00000522963 CENPIQ92674 756 aaPredicted RBP12.41□□□□□ -0.42
PVT1-215ENST00000522963 IRF7Q92985 503 aa12.41□□□□□ -0.42
PVT1-215ENST00000522963 PGAP3Q96FM1 320 aaPredicted RBP12.41□□□□□ -0.42
PVT1-215ENST00000522963 ZFRQ96KR1 1074 aaKnown RBP12.41□□□□□ -0.42
PVT1-215ENST00000522963 GOLPH3Q9H4A6 298 aa12.41□□□□□ -0.42
PVT1-215ENST00000522963 FAM204AQ9H8W3 233 aa12.41□□□□□ -0.42
PVT1-215ENST00000522963 TBC1D17Q9HA65 648 aa12.41□□□□□ -0.42
PVT1-215ENST00000522963 THG1LQ9NWX6 298 aaKnown RBP12.41□□□□□ -0.42
PVT1-215ENST00000522963 DDIT4Q9NX09 232 aa12.41□□□□□ -0.42
PVT1-215ENST00000522963 COX16Q9P0S2 106 aa12.41□□□□□ -0.42
PVT1-215ENST00000522963 KIF26AQ9ULI4 1882 aaPredicted RBP12.41□□□□□ -0.42
PVT1-215ENST00000522963 CAPN6Q9Y6Q1 641 aa12.41□□□□□ -0.42
PVT1-215ENST00000522963 HELZP42694 1942 aaKnown RBP12.41□□□□□ -0.42
PVT1-215ENST00000522963 F5P12259 2224 aa12.4□□□□□ -0.42
PVT1-215ENST00000522963 SLC12A8A0AV02 714 aa12.4□□□□□ -0.42
PVT1-215ENST00000522963 SOBPA7XYQ1 873 aa12.4□□□□□ -0.42
PVT1-215ENST00000522963 SCAMP3O14828 347 aaKnown RBP12.4□□□□□ -0.42
PVT1-215ENST00000522963 IRAK2O43187 625 aa12.4□□□□□ -0.42
PVT1-215ENST00000522963 PALMO75781 387 aa12.4□□□□□ -0.42
PVT1-215ENST00000522963 ENDOD1O94919 500 aa12.4□□□□□ -0.42
PVT1-215ENST00000522963 PFKLP17858 780 aa12.4□□□□□ -0.42
PVT1-215ENST00000522963 CD72P21854 359 aa12.4□□□□□ -0.42
PVT1-215ENST00000522963 GBP1P32455 592 aa12.4□□□□□ -0.42
PVT1-215ENST00000522963 RDXP35241 583 aaKnown RBP12.4□□□□□ -0.42
PVT1-215ENST00000522963 KPNA1P52294 538 aaPredicted RBP12.4□□□□□ -0.42
PVT1-215ENST00000522963 HDAC4P56524 1084 aa12.4□□□□□ -0.42
PVT1-215ENST00000522963 SLC7A9P82251 487 aa12.4□□□□□ -0.42
PVT1-215ENST00000522963 DEUP1Q05D60 604 aa12.4□□□□□ -0.42
PVT1-215ENST00000522963 NME3Q13232 169 aa12.4□□□□□ -0.42
PVT1-215ENST00000522963 TRIP4Q15650 581 aaPredicted RBP12.4□□□□□ -0.42
PVT1-215ENST00000522963 MLF2Q15773 248 aaPredicted RBP12.4□□□□□ -0.42
PVT1-215ENST00000522963 IFI16Q16666 785 aaKnown RBP12.4□□□□□ -0.42
PVT1-215ENST00000522963 DAB2IPQ5VWQ8 1189 aa12.4□□□□□ -0.42
PVT1-215ENST00000522963 TRIM68Q6AZZ1 485 aa12.4□□□□□ -0.42
PVT1-215ENST00000522963 C11orf63Q6NUN7 778 aa12.4□□□□□ -0.42
PVT1-215ENST00000522963 TPRG1Q6ZUI0 275 aa12.4□□□□□ -0.42
PVT1-215ENST00000522963 STRADAQ7RTN6 431 aa12.4□□□□□ -0.42
PVT1-215ENST00000522963 LRRC57Q8N9N7 239 aa12.4□□□□□ -0.42
PVT1-215ENST00000522963 SH3RF2Q8TEC5 729 aa12.4□□□□□ -0.42
PVT1-215ENST00000522963 CALR3Q96L12 384 aaKnown RBP12.4□□□□□ -0.42
PVT1-215ENST00000522963 SERPINB11Q96P15 392 aa12.4□□□□□ -0.42
PVT1-215ENST00000522963 KLF16Q9BXK1 252 aaPredicted RBP12.4□□□□□ -0.42
PVT1-215ENST00000522963 IRX2Q9BZI1 471 aaPredicted RBP12.4□□□□□ -0.42
PVT1-215ENST00000522963 KIF9Q9HAQ2 790 aa12.4□□□□□ -0.42
PVT1-215ENST00000522963 GKN1Q9NS71 199 aa12.4□□□□□ -0.42
PVT1-215ENST00000522963 PIGVQ9NUD9 493 aa12.4□□□□□ -0.42
PVT1-215ENST00000522963 OBP2AQ9NY56 170 aa12.4□□□□□ -0.42
PVT1-215ENST00000522963 LCMT1Q9UIC8 334 aa12.4□□□□□ -0.42
PVT1-215ENST00000522963 HYOU1Q9Y4L1 999 aa12.4□□□□□ -0.42
PVT1-215ENST00000522963 CPQQ9Y646 472 aa12.4□□□□□ -0.42
PVT1-215ENST00000522963 COL4A3Q01955 1670 aa12.4□□□□□ -0.42
PVT1-215ENST00000522963 GOLGA6L9A6NEM1 432 aa12.39□□□□□ -0.43
PVT1-215ENST00000522963 LEFTY2O00292 366 aa12.39□□□□□ -0.43
PVT1-215ENST00000522963 CHADO15335 359 aa12.39□□□□□ -0.43
PVT1-215ENST00000522963 LRCH4O75427 683 aa12.39□□□□□ -0.43
PVT1-215ENST00000522963 HMBSP08397 361 aa12.39□□□□□ -0.43
PVT1-215ENST00000522963 IRF1P10914 325 aa12.39□□□□□ -0.43
PVT1-215ENST00000522963 TCF4P15884 667 aa12.39□□□□□ -0.43
PVT1-215ENST00000522963 WEE1P30291 646 aa12.39□□□□□ -0.43
PVT1-215ENST00000522963 MAN1A1P33908 653 aa12.39□□□□□ -0.43
PVT1-215ENST00000522963 SOX9P48436 509 aa12.39□□□□□ -0.43
PVT1-215ENST00000522963 VCPP55072 806 aaKnown RBP12.39□□□□□ -0.43
PVT1-215ENST00000522963 TBX4P57082 545 aa12.39□□□□□ -0.43
PVT1-215ENST00000522963 ZXDBP98169 803 aa12.39□□□□□ -0.43
PVT1-215ENST00000522963 TNK2Q07912 1038 aa12.39□□□□□ -0.43
PVT1-215ENST00000522963 NNTQ13423 1086 aa12.39□□□□□ -0.43
PVT1-215ENST00000522963 UBXN2BQ14CS0 331 aa12.39□□□□□ -0.43
PVT1-215ENST00000522963 ACAP1Q15027 740 aa12.39□□□□□ -0.43
PVT1-215ENST00000522963 SLFN11Q7Z7L1 901 aa12.39□□□□□ -0.43
PVT1-215ENST00000522963 DAAM2Q86T65 1068 aa12.39□□□□□ -0.43
PVT1-215ENST00000522963 RIN3Q8TB24 985 aa12.39□□□□□ -0.43
PVT1-215ENST00000522963 WBP2Q969T9 261 aa12.39□□□□□ -0.43
PVT1-215ENST00000522963 SLC39A13Q96H72 371 aa12.39□□□□□ -0.43
PVT1-215ENST00000522963 SHDQ96IW2 340 aa12.39□□□□□ -0.43
PVT1-215ENST00000522963 FCRL2Q96LA5 508 aaPredicted RBP12.39□□□□□ -0.43
PVT1-215ENST00000522963 FOXQ1Q9C009 403 aa12.39□□□□□ -0.43
PVT1-215ENST00000522963 EBF3Q9H4W6 596 aa12.39□□□□□ -0.43
PVT1-215ENST00000522963 GTSE1Q9NYZ3 720 aa12.39□□□□□ -0.43
PVT1-215ENST00000522963 RAPGEFL1Q9UHV5 662 aa12.39□□□□□ -0.43
PVT1-215ENST00000522963 TLR6Q9Y2C9 796 aa12.39□□□□□ -0.43
PVT1-215ENST00000522963 HBS1LQ9Y450 684 aaKnown RBP12.39□□□□□ -0.43
PVT1-215ENST00000522963 ALG6Q9Y672 507 aa12.39□□□□□ -0.43
PVT1-215ENST00000522963 WNT6Q9Y6F9 365 aa12.39□□□□□ -0.43
PVT1-215ENST00000522963 MYOFQ9NZM1 2061 aa12.38□□□□□ -0.43
PVT1-215ENST00000522963 RNF8O76064 485 aa12.38□□□□□ -0.43
PVT1-215ENST00000522963 F9P00740 461 aa12.38□□□□□ -0.43
PVT1-215ENST00000522963 IGLV3-27P01718 113 aa12.38□□□□□ -0.43
PVT1-215ENST00000522963 DESP17661 470 aa12.38□□□□□ -0.43
PVT1-215ENST00000522963 COMTP21964 271 aa12.38□□□□□ -0.43
PVT1-215ENST00000522963 MIPP30301 263 aa12.38□□□□□ -0.43
PVT1-215ENST00000522963 PCK1P35558 622 aa12.38□□□□□ -0.43
PVT1-215ENST00000522963 IFNAR2P48551 515 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms