RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.56□□□□□ -0.24
CPNE3-205ENST00000522240 COX16Q9P0S2 106 aa13.56□□□□□ -0.24
CPNE3-205ENST00000522240 RCOR3Q9P2K3 495 aaPredicted RBP13.56□□□□□ -0.24
CPNE3-205ENST00000522240 SFMBT1Q9UHJ3 866 aa13.56□□□□□ -0.24
CPNE3-205ENST00000522240 ZMYM5Q9UJ78 669 aa13.56□□□□□ -0.24
CPNE3-205ENST00000522240 EFR3BQ9Y2G0 817 aa13.56□□□□□ -0.24
CPNE3-205ENST00000522240 CLUHO75153 1309 aa13.56□□□□□ -0.24
CPNE3-205ENST00000522240 LRRD1A4D1F6 860 aa13.55□□□□□ -0.24
CPNE3-205ENST00000522240 C3orf70A6NLC5 250 aaPredicted RBP13.55□□□□□ -0.24
CPNE3-205ENST00000522240 MSI1O43347 362 aaKnown RBP13.55□□□□□ -0.24
CPNE3-205ENST00000522240 COCHO43405 550 aa13.55□□□□□ -0.24
CPNE3-205ENST00000522240 APOEP02649 317 aa13.55□□□□□ -0.24
CPNE3-205ENST00000522240 POU3F3P20264 500 aaPredicted RBP13.55□□□□□ -0.24
CPNE3-205ENST00000522240 KDELR1P24390 212 aa13.55□□□□□ -0.24
CPNE3-205ENST00000522240 ADRA1BP35368 520 aa13.55□□□□□ -0.24
CPNE3-205ENST00000522240 TBX4P57082 545 aa13.55□□□□□ -0.24
CPNE3-205ENST00000522240 ITIH3Q06033 890 aa13.55□□□□□ -0.24
CPNE3-205ENST00000522240 HYAL1Q12794 435 aa13.55□□□□□ -0.24
CPNE3-205ENST00000522240 ZNF211Q13398 564 aaPredicted RBP13.55□□□□□ -0.24
CPNE3-205ENST00000522240 ATP13A4Q4VNC1 1196 aa13.55□□□□□ -0.24
CPNE3-205ENST00000522240 TFDP3Q5H9I0 405 aa13.55□□□□□ -0.24
CPNE3-205ENST00000522240 TCEAL5Q5H9L2 206 aa13.55□□□□□ -0.24
CPNE3-205ENST00000522240 KCNT1Q5JUK3 1230 aa13.55□□□□□ -0.24
CPNE3-205ENST00000522240 ACBD5Q5T8D3 534 aaPredicted RBP13.55□□□□□ -0.24
CPNE3-205ENST00000522240 SPOCD1Q6ZMY3 1216 aa13.55□□□□□ -0.24
CPNE3-205ENST00000522240 PDZD4Q76G19 769 aaPredicted RBP13.55□□□□□ -0.24
CPNE3-205ENST00000522240 CCDC50Q8IVM0 306 aa13.55□□□□□ -0.24
CPNE3-205ENST00000522240 CEP112Q8N8E3 955 aa13.55□□□□□ -0.24
CPNE3-205ENST00000522240 MNS1Q8NEH6 495 aa13.55□□□□□ -0.24
CPNE3-205ENST00000522240 VN1R2Q8NFZ6 395 aa13.55□□□□□ -0.24
CPNE3-205ENST00000522240 MAIP1Q8WWC4 291 aa13.55□□□□□ -0.24
CPNE3-205ENST00000522240 RAPGEF5Q92565 580 aa13.55□□□□□ -0.24
CPNE3-205ENST00000522240 PLD4Q96BZ4 506 aa13.55□□□□□ -0.24
CPNE3-205ENST00000522240 RPGRIP1Q96KN7 1286 aa13.55□□□□□ -0.24
CPNE3-205ENST00000522240 FCRL2Q96LA5 508 aaPredicted RBP13.55□□□□□ -0.24
CPNE3-205ENST00000522240 HAPLN3Q96S86 360 aa13.55□□□□□ -0.24
CPNE3-205ENST00000522240 PCDH18Q9HCL0 1135 aa13.55□□□□□ -0.24
CPNE3-205ENST00000522240 KLHL11Q9NVR0 708 aa13.55□□□□□ -0.24
CPNE3-205ENST00000522240 NUDT5Q9UKK9 219 aa13.55□□□□□ -0.24
CPNE3-205ENST00000522240 HELZP42694 1942 aaKnown RBP13.54□□□□□ -0.24
CPNE3-205ENST00000522240 MYO7AQ13402 2215 aa13.54□□□□□ -0.24
CPNE3-205ENST00000522240 hCG_1818297A0A087WSY0 165 aa13.54□□□□□ -0.24
CPNE3-205ENST00000522240 SLC12A8A0AV02 714 aa13.54□□□□□ -0.24
CPNE3-205ENST00000522240 PI4K2BG5E9Z4 385 aa13.54□□□□□ -0.24
CPNE3-205ENST00000522240 ZNF197O14709 1029 aa13.54□□□□□ -0.24
CPNE3-205ENST00000522240 GLP2RO95838 553 aa13.54□□□□□ -0.24
CPNE3-205ENST00000522240 TBX18O95935 607 aa13.54□□□□□ -0.24
CPNE3-205ENST00000522240 RHOP08100 348 aa13.54□□□□□ -0.24
CPNE3-205ENST00000522240 HTR7P34969 479 aa13.54□□□□□ -0.24
CPNE3-205ENST00000522240 CDKN2BP42772 138 aa13.54□□□□□ -0.24
CPNE3-205ENST00000522240 CDH6P55285 790 aa13.54□□□□□ -0.24
CPNE3-205ENST00000522240 COG7P83436 770 aa13.54□□□□□ -0.24
CPNE3-205ENST00000522240 NRG1Q02297 640 aaPredicted RBP13.54□□□□□ -0.24
CPNE3-205ENST00000522240 DPYSL3Q14195 570 aa13.54□□□□□ -0.24
CPNE3-205ENST00000522240 KRT81Q14533 505 aa13.54□□□□□ -0.24
CPNE3-205ENST00000522240 ARHGAP15Q53QZ3 475 aa13.54□□□□□ -0.24
CPNE3-205ENST00000522240 NUGGCQ68CJ6 796 aa13.54□□□□□ -0.24
CPNE3-205ENST00000522240 MFSD7Q6UXD7 560 aa13.54□□□□□ -0.24
CPNE3-205ENST00000522240 SLC13A5Q86YT5 568 aaPredicted RBP13.54□□□□□ -0.24
CPNE3-205ENST00000522240 ATP6V0D2Q8N8Y2 350 aa13.54□□□□□ -0.24
CPNE3-205ENST00000522240 KCTD6Q8NC69 237 aa13.54□□□□□ -0.24
CPNE3-205ENST00000522240 SMG7Q92540 1137 aaKnown RBP13.54□□□□□ -0.24
CPNE3-205ENST00000522240 RNF34Q969K3 372 aa13.54□□□□□ -0.24
CPNE3-205ENST00000522240 ACSF2Q96CM8 615 aaPredicted RBP13.54□□□□□ -0.24
CPNE3-205ENST00000522240 FAF2Q96CS3 445 aa13.54□□□□□ -0.24
CPNE3-205ENST00000522240 CAPZA3Q96KX2 299 aa13.54□□□□□ -0.24
CPNE3-205ENST00000522240 KCTD15Q96SI1 283 aaPredicted RBP13.54□□□□□ -0.24
CPNE3-205ENST00000522240 OSBPL8Q9BZF1 889 aa13.54□□□□□ -0.24
CPNE3-205ENST00000522240 NACA2Q9H009 215 aa13.54□□□□□ -0.24
CPNE3-205ENST00000522240 TKTL2Q9H0I9 626 aa13.54□□□□□ -0.24
CPNE3-205ENST00000522240 OSBPL2Q9H1P3 480 aa13.54□□□□□ -0.24
CPNE3-205ENST00000522240 DHX35Q9H5Z1 703 aaKnown RBP13.54□□□□□ -0.24
CPNE3-205ENST00000522240 PRDM16Q9HAZ2 1276 aa13.54□□□□□ -0.24
CPNE3-205ENST00000522240 GPATCH2LQ9NWQ4 482 aa13.54□□□□□ -0.24
CPNE3-205ENST00000522240 HCFC1R1Q9NWW0 138 aa13.54□□□□□ -0.24
CPNE3-205ENST00000522240 DNMT3BQ9UBC3 853 aaKnown RBP13.54□□□□□ -0.24
CPNE3-205ENST00000522240 CCDC195A0A1B0GUA6 201 aa13.53□□□□□ -0.24
CPNE3-205ENST00000522240 A0A1W2PRU2 124 aa13.53□□□□□ -0.24
CPNE3-205ENST00000522240 C2orf78A6NCI8 922 aa13.53□□□□□ -0.24
CPNE3-205ENST00000522240 KCNU1A8MYU2 1149 aa13.53□□□□□ -0.24
CPNE3-205ENST00000522240 LATS1O95835 1130 aa13.53□□□□□ -0.24
CPNE3-205ENST00000522240 FGGP02679 453 aa13.53□□□□□ -0.24
CPNE3-205ENST00000522240 MYL4P12829 197 aa13.53□□□□□ -0.24
CPNE3-205ENST00000522240 L1CAMP32004 1257 aa13.53□□□□□ -0.24
CPNE3-205ENST00000522240 SLC7A9P82251 487 aa13.53□□□□□ -0.24
CPNE3-205ENST00000522240 CYP4F8P98187 520 aa13.53□□□□□ -0.24
CPNE3-205ENST00000522240 SEMA3BQ13214 749 aa13.53□□□□□ -0.24
CPNE3-205ENST00000522240 KLF1Q13351 362 aaPredicted RBP13.53□□□□□ -0.24
CPNE3-205ENST00000522240 GRIN2CQ14957 1233 aa13.53□□□□□ -0.24
CPNE3-205ENST00000522240 CA9Q16790 459 aa13.53□□□□□ -0.24
CPNE3-205ENST00000522240 ZC3H12AQ5D1E8 599 aaKnown RBP13.53□□□□□ -0.24
CPNE3-205ENST00000522240 TJAP1Q5JTD0 557 aa13.53□□□□□ -0.24
CPNE3-205ENST00000522240 PRSS36Q5K4E3 855 aa13.53□□□□□ -0.24
CPNE3-205ENST00000522240 MIB1Q86YT6 1006 aa13.53□□□□□ -0.24
CPNE3-205ENST00000522240 UNC45BQ8IWX7 931 aa13.53□□□□□ -0.24
CPNE3-205ENST00000522240 SHKBP1Q8TBC3 707 aa13.53□□□□□ -0.24
CPNE3-205ENST00000522240 TSC1Q92574 1164 aa13.53□□□□□ -0.24
CPNE3-205ENST00000522240 MS4A14Q96JA4 679 aa13.53□□□□□ -0.24
CPNE3-205ENST00000522240 BTN2A3PQ96KV6 586 aa13.53□□□□□ -0.24
CPNE3-205ENST00000522240 EPAS1Q99814 870 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms