RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 CCR2P41597 374 aa22.16■■□□□ 1.14
R3HCC1-208ENST00000522012 NTHL1P78549 312 aa22.16■■□□□ 1.14
R3HCC1-208ENST00000522012 GRIN2CQ14957 1233 aa22.16■■□□□ 1.14
R3HCC1-208ENST00000522012 PPP2R5EQ16537 467 aa22.16■■□□□ 1.14
R3HCC1-208ENST00000522012 CTAGE6Q86UF2 777 aa22.16■■□□□ 1.14
R3HCC1-208ENST00000522012 RFX6Q8HWS3 928 aa22.16■■□□□ 1.14
R3HCC1-208ENST00000522012 CTAGE4Q8IX94 777 aa22.16■■□□□ 1.14
R3HCC1-208ENST00000522012 MAB21L3Q8N8X9 362 aa22.16■■□□□ 1.14
R3HCC1-208ENST00000522012 TCEAL4Q96EI5 215 aa22.16■■□□□ 1.14
R3HCC1-208ENST00000522012 HERPUD2Q9BSE4 406 aa22.16■■□□□ 1.14
R3HCC1-208ENST00000522012 LMCD1Q9NZU5 365 aa22.16■■□□□ 1.14
R3HCC1-208ENST00000522012 SLC12A6Q9UHW9 1150 aa22.16■■□□□ 1.14
R3HCC1-208ENST00000522012 SNX10Q9Y5X0 201 aa22.16■■□□□ 1.14
R3HCC1-208ENST00000522012 NRG2O14511 850 aaPredicted RBP22.15■■□□□ 1.14
R3HCC1-208ENST00000522012 LINC01565O15544 149 aa22.15■■□□□ 1.14
R3HCC1-208ENST00000522012 CREB3O43889 395 aa22.15■■□□□ 1.14
R3HCC1-208ENST00000522012 PAGE1O75459 146 aa22.15■■□□□ 1.14
R3HCC1-208ENST00000522012 SLU7O95391 586 aaKnown RBP22.15■■□□□ 1.14
R3HCC1-208ENST00000522012 PTPN7P35236 360 aa22.15■■□□□ 1.14
R3HCC1-208ENST00000522012 COG7P83436 770 aa22.15■■□□□ 1.14
R3HCC1-208ENST00000522012 RING1Q06587 406 aa22.15■■□□□ 1.14
R3HCC1-208ENST00000522012 EFHBQ8N7U6 833 aa22.15■■□□□ 1.14
R3HCC1-208ENST00000522012 ATP6V0D2Q8N8Y2 350 aa22.15■■□□□ 1.14
R3HCC1-208ENST00000522012 SHKBP1Q8TBC3 707 aa22.15■■□□□ 1.14
R3HCC1-208ENST00000522012 FAM71BQ8TC56 605 aa22.15■■□□□ 1.14
R3HCC1-208ENST00000522012 SLC22A12Q96S37 553 aa22.15■■□□□ 1.14
R3HCC1-208ENST00000522012 HAPLN3Q96S86 360 aa22.15■■□□□ 1.14
R3HCC1-208ENST00000522012 SIK2Q9H0K1 926 aa22.15■■□□□ 1.14
R3HCC1-208ENST00000522012 GKN1Q9NS71 199 aa22.15■■□□□ 1.14
R3HCC1-208ENST00000522012 SMPD4Q9NXE4 827 aa22.15■■□□□ 1.14
R3HCC1-208ENST00000522012 GREB1Q4ZG55 1949 aa22.14■■□□□ 1.14
R3HCC1-208ENST00000522012 CHD7Q9P2D1 2997 aa22.14■■□□□ 1.13
R3HCC1-208ENST00000522012 TJP3O95049 919 aa22.14■■□□□ 1.13
R3HCC1-208ENST00000522012 IGLV3-27P01718 113 aa22.14■■□□□ 1.13
R3HCC1-208ENST00000522012 SRGAP2BP0DMP2 458 aa22.14■■□□□ 1.13
R3HCC1-208ENST00000522012 IL4RP24394 825 aa22.14■■□□□ 1.13
R3HCC1-208ENST00000522012 ARL4AP40617 200 aa22.14■■□□□ 1.13
R3HCC1-208ENST00000522012 KCNQ1P51787 676 aa22.14■■□□□ 1.13
R3HCC1-208ENST00000522012 TAZQ16635 292 aa22.14■■□□□ 1.13
R3HCC1-208ENST00000522012 ARHGAP15Q53QZ3 475 aa22.14■■□□□ 1.13
R3HCC1-208ENST00000522012 RARS2Q5T160 578 aaKnown RBP22.14■■□□□ 1.13
R3HCC1-208ENST00000522012 STXBP5Q5T5C0 1151 aa22.14■■□□□ 1.13
R3HCC1-208ENST00000522012 LRRN4CLQ8ND94 238 aa22.14■■□□□ 1.13
R3HCC1-208ENST00000522012 SPATA4Q8NEY3 305 aa22.14■■□□□ 1.13
R3HCC1-208ENST00000522012 ZNF670Q9BS34 389 aa22.14■■□□□ 1.13
R3HCC1-208ENST00000522012 APOL5Q9BWW9 433 aa22.14■■□□□ 1.13
R3HCC1-208ENST00000522012 KLF16Q9BXK1 252 aaPredicted RBP22.14■■□□□ 1.13
R3HCC1-208ENST00000522012 CWC15Q9P013 229 aaKnown RBP22.14■■□□□ 1.13
R3HCC1-208ENST00000522012 XPO7Q9UIA9 1087 aaKnown RBP22.14■■□□□ 1.13
R3HCC1-208ENST00000522012 TRAV19A0A0A6YYK7 116 aa22.13■■□□□ 1.13
R3HCC1-208ENST00000522012 FAM72CH0Y354 149 aa22.13■■□□□ 1.13
R3HCC1-208ENST00000522012 H3BRJ5 948 aa22.13■■□□□ 1.13
R3HCC1-208ENST00000522012 GLP2RO95838 553 aa22.13■■□□□ 1.13
R3HCC1-208ENST00000522012 CKMP06732 381 aa22.13■■□□□ 1.13
R3HCC1-208ENST00000522012 IRF1P10914 325 aa22.13■■□□□ 1.13
R3HCC1-208ENST00000522012 DYNLT1P63172 113 aa22.13■■□□□ 1.13
R3HCC1-208ENST00000522012 ADCY2Q08462 1091 aa22.13■■□□□ 1.13
R3HCC1-208ENST00000522012 C2orf54Q08AI8 447 aa22.13■■□□□ 1.13
R3HCC1-208ENST00000522012 TEAD2Q15562 447 aa22.13■■□□□ 1.13
R3HCC1-208ENST00000522012 SLC5A9Q2M3M2 681 aa22.13■■□□□ 1.13
R3HCC1-208ENST00000522012 ANKRD20A8PQ5CZ79 823 aa22.13■■□□□ 1.13
R3HCC1-208ENST00000522012 GPR158Q5T848 1215 aa22.13■■□□□ 1.13
R3HCC1-208ENST00000522012 FAM72AQ5TYM5 149 aa22.13■■□□□ 1.13
R3HCC1-208ENST00000522012 NUGGCQ68CJ6 796 aa22.13■■□□□ 1.13
R3HCC1-208ENST00000522012 FAM72DQ6L9T8 149 aa22.13■■□□□ 1.13
R3HCC1-208ENST00000522012 TMEM184AQ6ZMB5 413 aa22.13■■□□□ 1.13
R3HCC1-208ENST00000522012 ZNF572Q7Z3I7 529 aaPredicted RBP22.13■■□□□ 1.13
R3HCC1-208ENST00000522012 FAM72BQ86X60 149 aa22.13■■□□□ 1.13
R3HCC1-208ENST00000522012 UNC45BQ8IWX7 931 aa22.13■■□□□ 1.13
R3HCC1-208ENST00000522012 DEFB123Q8N688 67 aa22.13■■□□□ 1.13
R3HCC1-208ENST00000522012 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.13■■□□□ 1.13
R3HCC1-208ENST00000522012 MAIP1Q8WWC4 291 aa22.13■■□□□ 1.13
R3HCC1-208ENST00000522012 TSC1Q92574 1164 aa22.13■■□□□ 1.13
R3HCC1-208ENST00000522012 RNF157Q96PX1 679 aa22.13■■□□□ 1.13
R3HCC1-208ENST00000522012 OSBPL2Q9H1P3 480 aa22.13■■□□□ 1.13
R3HCC1-208ENST00000522012 OR12D3Q9UGF7 316 aa22.13■■□□□ 1.13
R3HCC1-208ENST00000522012 EFR3BQ9Y2G0 817 aa22.13■■□□□ 1.13
R3HCC1-208ENST00000522012 EEF2KO00418 725 aaKnown RBP22.12■■□□□ 1.13
R3HCC1-208ENST00000522012 ZNF197O14709 1029 aa22.12■■□□□ 1.13
R3HCC1-208ENST00000522012 MOSPD3O75425 235 aa22.12■■□□□ 1.13
R3HCC1-208ENST00000522012 OLFM2O95897 454 aa22.12■■□□□ 1.13
R3HCC1-208ENST00000522012 GOT1P17174 413 aa22.12■■□□□ 1.13
R3HCC1-208ENST00000522012 GGCXP38435 758 aa22.12■■□□□ 1.13
R3HCC1-208ENST00000522012 HARS2P49590 506 aaKnown RBP22.12■■□□□ 1.13
R3HCC1-208ENST00000522012 VSIG1Q86XK7 387 aa22.12■■□□□ 1.13
R3HCC1-208ENST00000522012 PLD4Q96BZ4 506 aa22.12■■□□□ 1.13
R3HCC1-208ENST00000522012 BTN2A3PQ96KV6 586 aa22.12■■□□□ 1.13
R3HCC1-208ENST00000522012 CSPG4P5Q96PW8 444 aa22.12■■□□□ 1.13
R3HCC1-208ENST00000522012 SLC46A2Q9BY10 475 aa22.12■■□□□ 1.13
R3HCC1-208ENST00000522012 RBM12Q9NTZ6 932 aaKnown RBP22.12■■□□□ 1.13
R3HCC1-208ENST00000522012 NR2E1Q9Y466 385 aa22.12■■□□□ 1.13
R3HCC1-208ENST00000522012 GOLGA6L10A0A0M3HER8 536 aa22.11■■□□□ 1.13
R3HCC1-208ENST00000522012 DAPK3O43293 454 aa22.11■■□□□ 1.13
R3HCC1-208ENST00000522012 CST8O60676 142 aa22.11■■□□□ 1.13
R3HCC1-208ENST00000522012 IGFBP4P22692 258 aa22.11■■□□□ 1.13
R3HCC1-208ENST00000522012 DDX6P26196 483 aaKnown RBP eCLIP22.11■■□□□ 1.13
R3HCC1-208ENST00000522012 KLF1Q13351 362 aaPredicted RBP22.11■■□□□ 1.13
R3HCC1-208ENST00000522012 TFDP2Q14188 446 aa22.11■■□□□ 1.13
R3HCC1-208ENST00000522012 PRSS36Q5K4E3 855 aa22.11■■□□□ 1.13
R3HCC1-208ENST00000522012 ANKRD54Q6NXT1 300 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms