RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 ERLIN1O75477 346 aa11.37□□□□□ -0.59
MRPS28-208ENST00000521605 FTCDO95954 541 aa11.37□□□□□ -0.59
MRPS28-208ENST00000521605 NFICP08651 508 aa11.37□□□□□ -0.59
MRPS28-208ENST00000521605 OR4Q2P0C623 313 aa11.37□□□□□ -0.59
MRPS28-208ENST00000521605 MMP8P22894 467 aa11.37□□□□□ -0.59
MRPS28-208ENST00000521605 TNFRSF8P28908 595 aa11.37□□□□□ -0.59
MRPS28-208ENST00000521605 RDXP35241 583 aaKnown RBP11.37□□□□□ -0.59
MRPS28-208ENST00000521605 EPHB3P54753 998 aa11.37□□□□□ -0.59
MRPS28-208ENST00000521605 FAM193AP78312 1265 aa11.37□□□□□ -0.59
MRPS28-208ENST00000521605 MYO1EQ12965 1108 aa11.37□□□□□ -0.59
MRPS28-208ENST00000521605 DMC1Q14565 340 aa11.37□□□□□ -0.59
MRPS28-208ENST00000521605 TEX35Q5T0J7 233 aa11.37□□□□□ -0.59
MRPS28-208ENST00000521605 NAIF1Q69YI7 327 aaPredicted RBP11.37□□□□□ -0.59
MRPS28-208ENST00000521605 TRIM68Q6AZZ1 485 aa11.37□□□□□ -0.59
MRPS28-208ENST00000521605 PLEKHA7Q6IQ23 1121 aa11.37□□□□□ -0.59
MRPS28-208ENST00000521605 ARMCX6Q7L4S7 300 aa11.37□□□□□ -0.59
MRPS28-208ENST00000521605 LIMS2Q7Z4I7 341 aa11.37□□□□□ -0.59
MRPS28-208ENST00000521605 UBL4BQ8N7F7 174 aa11.37□□□□□ -0.59
MRPS28-208ENST00000521605 TMEM35BQ8NCS4 154 aa11.37□□□□□ -0.59
MRPS28-208ENST00000521605 BEST2Q8NFU1 509 aa11.37□□□□□ -0.59
MRPS28-208ENST00000521605 ZNF564Q8TBZ8 553 aaPredicted RBP11.37□□□□□ -0.59
MRPS28-208ENST00000521605 COG1Q8WTW3 980 aa11.37□□□□□ -0.59
MRPS28-208ENST00000521605 CD101Q93033 1021 aa11.37□□□□□ -0.59
MRPS28-208ENST00000521605 MIS12Q9H081 205 aa11.37□□□□□ -0.59
MRPS28-208ENST00000521605 EBF3Q9H4W6 596 aa11.37□□□□□ -0.59
MRPS28-208ENST00000521605 ANKZF1Q9H8Y5 726 aa11.37□□□□□ -0.59
MRPS28-208ENST00000521605 FBRSL1Q9HCM7 1045 aaKnown RBP11.37□□□□□ -0.59
MRPS28-208ENST00000521605 GKN1Q9NS71 199 aa11.37□□□□□ -0.59
MRPS28-208ENST00000521605 THG1LQ9NWX6 298 aaKnown RBP11.37□□□□□ -0.59
MRPS28-208ENST00000521605 DPP3Q9NY33 737 aa11.37□□□□□ -0.59
MRPS28-208ENST00000521605 CTTNBP2NLQ9P2B4 639 aa11.37□□□□□ -0.59
MRPS28-208ENST00000521605 STRIP2Q9ULQ0 834 aa11.37□□□□□ -0.59
MRPS28-208ENST00000521605 CEP83Q9Y592 693 aa11.37□□□□□ -0.59
MRPS28-208ENST00000521605 ALG6Q9Y672 507 aa11.37□□□□□ -0.59
MRPS28-208ENST00000521605 ATXN2Q99700 1313 aaKnown RBP11.36□□□□□ -0.59
MRPS28-208ENST00000521605 NUP210Q8TEM1 1887 aaPredicted RBP11.36□□□□□ -0.59
MRPS28-208ENST00000521605 SMIM28A0A1B0GU29 152 aa11.36□□□□□ -0.59
MRPS28-208ENST00000521605 OTOL1A6NHN0 477 aaPredicted RBP11.36□□□□□ -0.59
MRPS28-208ENST00000521605 PGRMC1O00264 195 aaKnown RBP11.36□□□□□ -0.59
MRPS28-208ENST00000521605 DDX3YO15523 660 aaKnown RBP11.36□□□□□ -0.59
MRPS28-208ENST00000521605 SRGAP2O75044 1071 aa11.36□□□□□ -0.59
MRPS28-208ENST00000521605 PRB1P04280 392 aa11.36□□□□□ -0.59
MRPS28-208ENST00000521605 ENGP17813 658 aa11.36□□□□□ -0.59
MRPS28-208ENST00000521605 ABCB4P21439 1286 aa11.36□□□□□ -0.59
MRPS28-208ENST00000521605 GABRR2P28476 465 aa11.36□□□□□ -0.59
MRPS28-208ENST00000521605 OSTNP61366 133 aa11.36□□□□□ -0.59
MRPS28-208ENST00000521605 TNNC1P63316 161 aa11.36□□□□□ -0.59
MRPS28-208ENST00000521605 CYP4F8P98187 520 aa11.36□□□□□ -0.59
MRPS28-208ENST00000521605 LMAN2Q12907 356 aa11.36□□□□□ -0.59
MRPS28-208ENST00000521605 MRPL58Q14197 206 aaKnown RBP11.36□□□□□ -0.59
MRPS28-208ENST00000521605 NAA30Q147X3 362 aaPredicted RBP11.36□□□□□ -0.59
MRPS28-208ENST00000521605 USP39Q53GS9 565 aaKnown RBP11.36□□□□□ -0.59
MRPS28-208ENST00000521605 ARHGAP15Q53QZ3 475 aa11.36□□□□□ -0.59
MRPS28-208ENST00000521605 TAF3Q5VWG9 929 aa11.36□□□□□ -0.59
MRPS28-208ENST00000521605 FBXO38Q6PIJ6 1188 aa11.36□□□□□ -0.59
MRPS28-208ENST00000521605 GAREM2Q75VX8 874 aa11.36□□□□□ -0.59
MRPS28-208ENST00000521605 UNC93AQ86WB7 457 aa11.36□□□□□ -0.59
MRPS28-208ENST00000521605 TTC30AQ86WT1 665 aa11.36□□□□□ -0.59
MRPS28-208ENST00000521605 NOA1Q8NC60 698 aaKnown RBP11.36□□□□□ -0.59
MRPS28-208ENST00000521605 TSTD1Q8NFU3 115 aa11.36□□□□□ -0.59
MRPS28-208ENST00000521605 MDM1Q8TC05 714 aa11.36□□□□□ -0.59
MRPS28-208ENST00000521605 TSC1Q92574 1164 aa11.36□□□□□ -0.59
MRPS28-208ENST00000521605 ZNF653Q96CK0 615 aa11.36□□□□□ -0.59
MRPS28-208ENST00000521605 FAM212AQ96EL1 285 aa11.36□□□□□ -0.59
MRPS28-208ENST00000521605 CHFRQ96EP1 664 aa11.36□□□□□ -0.59
MRPS28-208ENST00000521605 HPDLQ96IR7 371 aa11.36□□□□□ -0.59
MRPS28-208ENST00000521605 NUSAP1Q9BXS6 441 aaKnown RBP11.36□□□□□ -0.59
MRPS28-208ENST00000521605 PARD6BQ9BYG5 372 aa11.36□□□□□ -0.59
MRPS28-208ENST00000521605 CRISPLD1Q9H336 500 aa11.36□□□□□ -0.59
MRPS28-208ENST00000521605 CCDC86Q9H6F5 360 aaKnown RBP11.36□□□□□ -0.59
MRPS28-208ENST00000521605 OSGEPQ9NPF4 335 aa11.36□□□□□ -0.59
MRPS28-208ENST00000521605 FSCN3Q9NQT6 498 aa11.36□□□□□ -0.59
MRPS28-208ENST00000521605 PARVAQ9NVD7 372 aa11.36□□□□□ -0.59
MRPS28-208ENST00000521605 GDAP2Q9NXN4 497 aa11.36□□□□□ -0.59
MRPS28-208ENST00000521605 WDR35Q9P2L0 1181 aa11.36□□□□□ -0.59
MRPS28-208ENST00000521605 CNOT8Q9UFF9 292 aaKnown RBP11.36□□□□□ -0.59
MRPS28-208ENST00000521605 EBF1Q9UH73 591 aa11.36□□□□□ -0.59
MRPS28-208ENST00000521605 SLC27A5Q9Y2P5 690 aa11.36□□□□□ -0.59
MRPS28-208ENST00000521605 RAXQ9Y2V3 346 aa11.36□□□□□ -0.59
MRPS28-208ENST00000521605 CITO14578 2027 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 H0Y626 953 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 KCNK3O14649 394 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 TRDMT1O14717 391 aaKnown RBP11.35□□□□□ -0.59
MRPS28-208ENST00000521605 ZNF185O15231 689 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 THAP12O43422 761 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 SOAT2O75908 522 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 ZRANB2O95218 330 aaKnown RBP eCLIP11.35□□□□□ -0.59
MRPS28-208ENST00000521605 TRIM16O95361 564 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 ITGB3P05106 788 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 SETSIPP0DME0 302 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 VDRP11473 427 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 LRPAP1P30533 357 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 POLR2BP30876 1174 aaKnown RBP11.35□□□□□ -0.59
MRPS28-208ENST00000521605 CTNNA1P35221 906 aaKnown RBP11.35□□□□□ -0.59
MRPS28-208ENST00000521605 ALDH1A3P47895 512 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 GALK1P51570 392 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 DUSP4Q13115 394 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 PLD1Q13393 1074 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 RUNX3Q13761 415 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 CNGA2Q16280 664 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms