RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 IKZF4Q9H2S9 585 aa7.47□□□□□ -1.21
NUDCD1-204ENST00000521439 ENTPD2Q9Y5L3 495 aa7.47□□□□□ -1.21
NUDCD1-204ENST00000521439 SLC38A8A6NNN8 435 aa7.46□□□□□ -1.22
NUDCD1-204ENST00000521439 HMGB1P1B2RPK0 211 aaPredicted RBP7.46□□□□□ -1.22
NUDCD1-204ENST00000521439 E7EVH7 732 aa7.46□□□□□ -1.22
NUDCD1-204ENST00000521439 MGST3O14880 152 aa7.46□□□□□ -1.22
NUDCD1-204ENST00000521439 RAMP2O60895 175 aa7.46□□□□□ -1.22
NUDCD1-204ENST00000521439 RHOBTB3O94955 611 aa7.46□□□□□ -1.22
NUDCD1-204ENST00000521439 PAPOLAP51003 745 aaKnown RBP7.46□□□□□ -1.22
NUDCD1-204ENST00000521439 ACTR2P61160 394 aa7.46□□□□□ -1.22
NUDCD1-204ENST00000521439 CBFBQ13951 182 aa7.46□□□□□ -1.22
NUDCD1-204ENST00000521439 ALFQ53S48 1182 aa7.46□□□□□ -1.22
NUDCD1-204ENST00000521439 ANKRD40Q6AI12 368 aa7.46□□□□□ -1.22
NUDCD1-204ENST00000521439 C16orf89Q6UX73 402 aa7.46□□□□□ -1.22
NUDCD1-204ENST00000521439 NAPRTQ6XQN6 538 aa7.46□□□□□ -1.22
NUDCD1-204ENST00000521439 SLC29A4Q7RTT9 530 aa7.46□□□□□ -1.22
NUDCD1-204ENST00000521439 GOLGA1Q92805 767 aa7.46□□□□□ -1.22
NUDCD1-204ENST00000521439 EDC3Q96F86 508 aaKnown RBP7.46□□□□□ -1.22
NUDCD1-204ENST00000521439 CIPCQ9C0C6 399 aa7.46□□□□□ -1.22
NUDCD1-204ENST00000521439 ALG13Q9NP73 1137 aaKnown RBP7.46□□□□□ -1.22
NUDCD1-204ENST00000521439 G6PC2Q9NQR9 355 aa7.46□□□□□ -1.22
NUDCD1-204ENST00000521439 C9orf78Q9NZ63 289 aaPredicted RBP7.46□□□□□ -1.22
NUDCD1-204ENST00000521439 TFCP2L1Q9NZI6 479 aa7.46□□□□□ -1.22
NUDCD1-204ENST00000521439 PGAP2Q9UHJ9 254 aa7.46□□□□□ -1.22
NUDCD1-204ENST00000521439 LRRFIP2Q9Y608 721 aaKnown RBP7.46□□□□□ -1.22
NUDCD1-204ENST00000521439 KAT6AQ92794 2004 aa7.45□□□□□ -1.22
NUDCD1-204ENST00000521439 M0QYT0 321 aa7.45□□□□□ -1.22
NUDCD1-204ENST00000521439 ZNF213O14771 459 aa7.45□□□□□ -1.22
NUDCD1-204ENST00000521439 NKX2-8O15522 239 aa7.45□□□□□ -1.22
NUDCD1-204ENST00000521439 PRAMEF2O60811 474 aa7.45□□□□□ -1.22
NUDCD1-204ENST00000521439 MBPP02686 304 aaPredicted RBP7.45□□□□□ -1.22
NUDCD1-204ENST00000521439 TK1P04183 234 aa7.45□□□□□ -1.22
NUDCD1-204ENST00000521439 GALNSP34059 522 aa7.45□□□□□ -1.22
NUDCD1-204ENST00000521439 COPB1P53618 953 aaKnown RBP7.45□□□□□ -1.22
NUDCD1-204ENST00000521439 CYP4F2P78329 520 aa7.45□□□□□ -1.22
NUDCD1-204ENST00000521439 IRX3P78415 501 aaPredicted RBP7.45□□□□□ -1.22
NUDCD1-204ENST00000521439 CFHR3Q02985 330 aa7.45□□□□□ -1.22
NUDCD1-204ENST00000521439 ERCC6LQ2NKX8 1250 aa7.45□□□□□ -1.22
NUDCD1-204ENST00000521439 TBRG1Q3YBR2 411 aa7.45□□□□□ -1.22
NUDCD1-204ENST00000521439 TMEM63BQ5T3F8 832 aa7.45□□□□□ -1.22
NUDCD1-204ENST00000521439 TSTD2Q5T7W7 516 aa7.45□□□□□ -1.22
NUDCD1-204ENST00000521439 CEP85Q6P2H3 762 aa7.45□□□□□ -1.22
NUDCD1-204ENST00000521439 LINC01465Q8N7H1 131 aa7.45□□□□□ -1.22
NUDCD1-204ENST00000521439 TERB1Q8NA31 727 aa7.45□□□□□ -1.22
NUDCD1-204ENST00000521439 OR52L2PQ8NGH6 319 aa7.45□□□□□ -1.22
NUDCD1-204ENST00000521439 CAGE1Q8TC20 777 aa7.45□□□□□ -1.22
NUDCD1-204ENST00000521439 GLMPQ8WWB7 406 aa7.45□□□□□ -1.22
NUDCD1-204ENST00000521439 BBC3Q96PG8 261 aaPredicted RBP7.45□□□□□ -1.22
NUDCD1-204ENST00000521439 MMS19Q96T76 1030 aa7.45□□□□□ -1.22
NUDCD1-204ENST00000521439 SLC17A6Q9P2U8 582 aa7.45□□□□□ -1.22
NUDCD1-204ENST00000521439 FZD4Q9ULV1 537 aa7.45□□□□□ -1.22
NUDCD1-204ENST00000521439 VPS4AQ9UN37 437 aa7.45□□□□□ -1.22
NUDCD1-204ENST00000521439 NCAM2O15394 837 aa7.44□□□□□ -1.22
NUDCD1-204ENST00000521439 KRT38O76015 456 aa7.44□□□□□ -1.22
NUDCD1-204ENST00000521439 MATN1P21941 496 aa7.44□□□□□ -1.22
NUDCD1-204ENST00000521439 DUSP1P28562 367 aa7.44□□□□□ -1.22
NUDCD1-204ENST00000521439 ANP32AP39687 249 aaKnown RBP7.44□□□□□ -1.22
NUDCD1-204ENST00000521439 JAK3P52333 1124 aa7.44□□□□□ -1.22
NUDCD1-204ENST00000521439 CACNA2D1P54289 1103 aa7.44□□□□□ -1.22
NUDCD1-204ENST00000521439 SOX10P56693 466 aa7.44□□□□□ -1.22
NUDCD1-204ENST00000521439 RPL15P61313 204 aaKnown RBP7.44□□□□□ -1.22
NUDCD1-204ENST00000521439 RBM6P78332 1123 aaKnown RBP7.44□□□□□ -1.22
NUDCD1-204ENST00000521439 RAE1P78406 368 aaKnown RBP7.44□□□□□ -1.22
NUDCD1-204ENST00000521439 POU5F1BQ06416 359 aa7.44□□□□□ -1.22
NUDCD1-204ENST00000521439 SMAD1Q15797 465 aaKnown RBP7.44□□□□□ -1.22
NUDCD1-204ENST00000521439 DGAT2L7PQ6IED9 249 aa7.44□□□□□ -1.22
NUDCD1-204ENST00000521439 USP13Q92995 863 aaPredicted RBP7.44□□□□□ -1.22
NUDCD1-204ENST00000521439 TBATAQ96M53 351 aa7.44□□□□□ -1.22
NUDCD1-204ENST00000521439 TIMP4Q99727 224 aa7.44□□□□□ -1.22
NUDCD1-204ENST00000521439 ABHD10Q9NUJ1 306 aa7.44□□□□□ -1.22
NUDCD1-204ENST00000521439 KCND3Q9UK17 655 aa7.44□□□□□ -1.22
NUDCD1-204ENST00000521439 FAM90A20PA6NIJ5 464 aa7.43□□□□□ -1.22
NUDCD1-204ENST00000521439 EXOC3O60645 756 aa7.43□□□□□ -1.22
NUDCD1-204ENST00000521439 C1RP00736 705 aa7.43□□□□□ -1.22
NUDCD1-204ENST00000521439 TFRCP02786 760 aaKnown RBP7.43□□□□□ -1.22
NUDCD1-204ENST00000521439 HNRNPCP07910 306 aaKnown RBP eCLIP7.43□□□□□ -1.22
NUDCD1-204ENST00000521439 CKMT1AP12532 417 aa7.43□□□□□ -1.22
NUDCD1-204ENST00000521439 APEHP13798 732 aaKnown RBP7.43□□□□□ -1.22
NUDCD1-204ENST00000521439 CALRP27797 417 aaKnown RBP7.43□□□□□ -1.22
NUDCD1-204ENST00000521439 MCM2P49736 904 aa7.43□□□□□ -1.22
NUDCD1-204ENST00000521439 FAM3BP58499 235 aaPredicted RBP7.43□□□□□ -1.22
NUDCD1-204ENST00000521439 FAM110CQ1W6H9 321 aa7.43□□□□□ -1.22
NUDCD1-204ENST00000521439 SYT13Q7L8C5 426 aa7.43□□□□□ -1.22
NUDCD1-204ENST00000521439 BCDIN3DQ7Z5W3 292 aaKnown RBP7.43□□□□□ -1.22
NUDCD1-204ENST00000521439 ANKS1BQ7Z6G8 1248 aa7.43□□□□□ -1.22
NUDCD1-204ENST00000521439 KAZALD1Q96I82 304 aa7.43□□□□□ -1.22
NUDCD1-204ENST00000521439 MACROD1Q9BQ69 325 aa7.43□□□□□ -1.22
NUDCD1-204ENST00000521439 ABHD16BQ9H3Z7 469 aa7.43□□□□□ -1.22
NUDCD1-204ENST00000521439 CDCP1Q9H5V8 836 aa7.43□□□□□ -1.22
NUDCD1-204ENST00000521439 RIC8AQ9NPQ8 531 aa7.43□□□□□ -1.22
NUDCD1-204ENST00000521439 GAR1Q9NY12 217 aaKnown RBP7.43□□□□□ -1.22
NUDCD1-204ENST00000521439 BAG5Q9UL15 447 aa7.43□□□□□ -1.22
NUDCD1-204ENST00000521439 RAB21Q9UL25 225 aa7.43□□□□□ -1.22
NUDCD1-204ENST00000521439 TRPC5Q9UL62 973 aaPredicted RBP7.43□□□□□ -1.22
NUDCD1-204ENST00000521439 RRN3P2A6NIE6 340 aa7.42□□□□□ -1.22
NUDCD1-204ENST00000521439 MT-CO3P00414 261 aa7.42□□□□□ -1.22
NUDCD1-204ENST00000521439 RXRAP19793 462 aa7.42□□□□□ -1.22
NUDCD1-204ENST00000521439 PROZP22891 400 aa7.42□□□□□ -1.22
NUDCD1-204ENST00000521439 HOXA4Q00056 320 aaPredicted RBP7.42□□□□□ -1.22
NUDCD1-204ENST00000521439 RNASELQ05823 741 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms