RNA–Protein interactions for RNA: ENST00000520887.1

FAM49B-218, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-218ENST00000520887 TJP2Q9UDY2 1190 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 SIX4Q9UIU6 781 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 KIAA1257Q9ULG3 409 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 L1RE1Q9UN81 338 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 COQ4Q9Y3A0 265 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 PCDHB4Q9Y5E5 795 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 INSL5Q9Y5Q6 135 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 PTPRJQ12913 1337 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 DNAH12Q6ZR08 3092 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 CCDC195A0A1B0GUA6 201 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 WDR27A2RRH5 827 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 MTMR11A4FU01 709 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 DBX1A6NMT0 343 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 LGALS16A8MUM7 142 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 F8W810 466 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 PPEF2O14830 753 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 NRDCO43847 1150 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 CILPO75339 1184 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 RTN3O95197 1032 aaPredicted RBP6.27□□□□□ -1.41
FAM49B-218ENST00000520887 PDGFRBP09619 1106 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 FAM200BP0CF97 657 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 EPCAMP16422 314 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 PTPN2P17706 415 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 RPL17P18621 184 aaKnown RBP6.27□□□□□ -1.41
FAM49B-218ENST00000520887 DNAJB1P25685 340 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 CDC25CP30307 473 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 GDNFP39905 211 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 KIR3DL1P43629 444 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 NDST1P52848 882 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 COPB1P53618 953 aaKnown RBP6.27□□□□□ -1.41
FAM49B-218ENST00000520887 BCAT1P54687 386 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 UBASH3AP57075 661 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 PSMC1P62191 440 aaKnown RBP6.27□□□□□ -1.41
FAM49B-218ENST00000520887 GOLGA8FQ08AF8 430 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 GOLGA8DPQ0D2H9 430 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 ADAM15Q13444 863 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 KRT31Q15323 416 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 MLANAQ16655 118 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 SOWAHAQ2M3V2 549 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 CBWD6Q4V339 395 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 PABPC1LQ4VXU2 614 aaKnown RBP6.27□□□□□ -1.41
FAM49B-218ENST00000520887 MDH1BQ5I0G3 518 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 CBWD3Q5JTY5 395 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 CBWD5Q5RIA9 395 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 FYB2Q5VWT5 728 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 SLC6A19Q695T7 634 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 PPP1R2P3Q6NXS1 205 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 TRIM65Q6PJ69 517 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 TMEM270Q6UE05 265 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 OTOP3Q7RTS5 596 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 THAP5Q7Z6K1 395 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 TADA2BQ86TJ2 420 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 VPS36Q86VN1 386 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 TCEAL8Q8IYN2 117 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 TDRD5Q8NAT2 981 aaKnown RBP6.27□□□□□ -1.41
FAM49B-218ENST00000520887 STKLD1Q8NE28 680 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 PDZD8Q8NEN9 1154 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 CMASQ8NFW8 434 aaPredicted RBP6.27□□□□□ -1.41
FAM49B-218ENST00000520887 VN1R2Q8NFZ6 395 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 IPO4Q8TEX9 1081 aaKnown RBP6.27□□□□□ -1.41
FAM49B-218ENST00000520887 MRPS31Q92665 395 aaKnown RBP6.27□□□□□ -1.41
FAM49B-218ENST00000520887 UBE2FQ969M7 185 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 MYLPFQ96A32 169 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 EAF1Q96JC9 268 aaPredicted RBP6.27□□□□□ -1.41
FAM49B-218ENST00000520887 PI4K2AQ9BTU6 479 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 TRIM62Q9BVG3 475 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 NUP58Q9BVL2 599 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 LSM14BQ9BX40 385 aaKnown RBP6.27□□□□□ -1.41
FAM49B-218ENST00000520887 LRRC3Q9BY71 257 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 GPR88Q9GZN0 384 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 NACA2Q9H009 215 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 ZCWPW1Q9H0M4 648 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 FBXO44Q9H4M3 255 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 SMYD3Q9H7B4 428 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 UBE2TQ9NPD8 197 aaPredicted RBP6.27□□□□□ -1.41
FAM49B-218ENST00000520887 DMAP1Q9NPF5 467 aaPredicted RBP6.27□□□□□ -1.41
FAM49B-218ENST00000520887 SAMSN1Q9NSI8 373 aaKnown RBP6.27□□□□□ -1.41
FAM49B-218ENST00000520887 YIPF1Q9Y548 306 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.27□□□□□ -1.41
FAM49B-218ENST00000520887 ZFP37Q9Y6Q3 630 aaPredicted RBP6.27□□□□□ -1.41
FAM49B-218ENST00000520887 TSC2P49815 1807 aa6.27□□□□□ -1.41
FAM49B-218ENST00000520887 CLUHO75153 1309 aa6.26□□□□□ -1.41
FAM49B-218ENST00000520887 H3BQ06 376 aaPredicted RBP6.26□□□□□ -1.41
FAM49B-218ENST00000520887 GABRDO14764 452 aa6.26□□□□□ -1.41
FAM49B-218ENST00000520887 CCL16O15467 120 aa6.26□□□□□ -1.41
FAM49B-218ENST00000520887 THAP12O43422 761 aa6.26□□□□□ -1.41
FAM49B-218ENST00000520887 VNN1O95497 513 aa6.26□□□□□ -1.41
FAM49B-218ENST00000520887 POU2F2P09086 479 aa6.26□□□□□ -1.41
FAM49B-218ENST00000520887 PAEPP09466 180 aa6.26□□□□□ -1.41
FAM49B-218ENST00000520887 WEE2P0C1S8 567 aa6.26□□□□□ -1.41
FAM49B-218ENST00000520887 OR4Q2P0C623 313 aa6.26□□□□□ -1.41
FAM49B-218ENST00000520887 SETSIPP0DME0 302 aa6.26□□□□□ -1.41
FAM49B-218ENST00000520887 VDRP11473 427 aa6.26□□□□□ -1.41
FAM49B-218ENST00000520887 PTPN1P18031 435 aaKnown RBP6.26□□□□□ -1.41
FAM49B-218ENST00000520887 ACAT1P24752 427 aaKnown RBP6.26□□□□□ -1.41
FAM49B-218ENST00000520887 DDX6P26196 483 aaKnown RBP eCLIP6.26□□□□□ -1.41
FAM49B-218ENST00000520887 KRT9P35527 623 aa6.26□□□□□ -1.41
FAM49B-218ENST00000520887 STAT1P42224 750 aa6.26□□□□□ -1.41
FAM49B-218ENST00000520887 MAGEA11P43364 429 aa6.26□□□□□ -1.41
FAM49B-218ENST00000520887 RAP1GAPP47736 663 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms