RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 NETO1Q8TDF5 533 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 ZNF689Q96CS4 500 aaPredicted RBP8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 C18orf8Q96DM3 657 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 TNIP3Q96KP6 325 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 FAM193BQ96PV7 902 aaPredicted RBP8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 ALS2CR12Q96Q35 445 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 SYT15Q9BQS2 421 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 ACBD6Q9BR61 282 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 TMEM175Q9BSA9 504 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 COLEC11Q9BWP8 271 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 MRPL9Q9BYD2 267 aaKnown RBP8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 GPR62Q9BZJ7 368 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 TRIM7Q9C029 511 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 CWH43Q9H720 699 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 RC3H2Q9HBD1 1191 aaKnown RBP8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 CDC23Q9UJX2 597 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 DSEQ9UL01 958 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 CDH9Q9ULB4 789 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 PRG3Q9Y2Y8 225 aaPredicted RBP8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 CEP83Q9Y592 693 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 MRFAP1Q9Y605 127 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 ALG6Q9Y672 507 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 TMEM191CA6NGB0 347 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 SIGLEC16A6NMB1 481 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 CLDN5O00501 218 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 SRGAP2O75044 1071 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 EFCAB14O75071 495 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 TADA2AO75478 443 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 BEST1O76090 585 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 BAIAP3O94812 1187 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 GJB6O95452 261 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 AMHP03971 560 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 ADORA2BP29275 332 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 EPHB4P54760 987 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 BCAR1P56945 870 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 RPL7AP62424 266 aaKnown RBP8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 CBX1P83916 185 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 TUBB2AQ13885 445 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 MRPL58Q14197 206 aaKnown RBP8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 ZNF268Q14587 947 aaPredicted RBP8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 MDH1BQ5I0G3 518 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 OVOS1Q6IE37 1185 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 C11orf63Q6NUN7 778 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 DAAM2Q86T65 1068 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 TMEM110Q86TL2 294 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 TMEM173Q86WV6 379 aaPredicted RBP8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 METTL23Q86XA0 190 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 XYLT1Q86Y38 959 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 LRRC43Q8N309 656 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 FEZF2Q8TBJ5 459 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 MYCBPAPQ8TBZ2 947 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 COG1Q8WTW3 980 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 BADQ92934 168 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 CD101Q93033 1021 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 ISL2Q96A47 359 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 PCED1BQ96HM7 432 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 HES6Q96HZ4 224 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 FRMD6Q96NE9 622 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 TMEM209Q96SK2 561 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 TUBB2BQ9BVA1 445 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 DUSP16Q9BY84 665 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 DNAI2Q9GZS0 605 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 SSU72Q9NP77 194 aaKnown RBP8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 TMEM30AQ9NV96 361 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 PARVAQ9NVD7 372 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 TMLHEQ9NVH6 421 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 FAM8A1Q9UBU6 413 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 ADAM28Q9UKQ2 775 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 SNX12Q9UMY4 172 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 PACSIN2Q9UNF0 486 aaPredicted RBP8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 FAN1Q9Y2M0 1017 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 HYOU1Q9Y4L1 999 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 SAR1BQ9Y6B6 198 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 PLXNA4Q9HCM2 1894 aa8.25□□□□□ -1.09
CTHRC1-203ENST00000520337 MYO16Q9Y6X6 1858 aa8.24□□□□□ -1.09
CTHRC1-203ENST00000520337 ARHGEF37A1IGU5 675 aa8.24□□□□□ -1.09
CTHRC1-203ENST00000520337 TMEM110-MUSTN1A8MSY1 372 aa8.24□□□□□ -1.09
CTHRC1-203ENST00000520337 NT5C1B-RDH14C9J2C7 533 aa8.24□□□□□ -1.09
CTHRC1-203ENST00000520337 E5RJQ4 531 aa8.24□□□□□ -1.09
CTHRC1-203ENST00000520337 SYN3O14994 580 aa8.24□□□□□ -1.09
CTHRC1-203ENST00000520337 ZNF185O15231 689 aa8.24□□□□□ -1.09
CTHRC1-203ENST00000520337 TRAPPC3O43617 180 aa8.24□□□□□ -1.09
CTHRC1-203ENST00000520337 TBC1D4O60343 1298 aa8.24□□□□□ -1.09
CTHRC1-203ENST00000520337 SLU7O95391 586 aaKnown RBP8.24□□□□□ -1.09
CTHRC1-203ENST00000520337 JUNBP17275 347 aaPredicted RBP8.24□□□□□ -1.09
CTHRC1-203ENST00000520337 COMTP21964 271 aa8.24□□□□□ -1.09
CTHRC1-203ENST00000520337 PCSK1P29120 753 aa8.24□□□□□ -1.09
CTHRC1-203ENST00000520337 PBX3P40426 434 aa8.24□□□□□ -1.09
CTHRC1-203ENST00000520337 RGS7P49802 495 aa8.24□□□□□ -1.09
CTHRC1-203ENST00000520337 CDR1P51861 262 aa8.24□□□□□ -1.09
CTHRC1-203ENST00000520337 CACNA2D1P54289 1103 aa8.24□□□□□ -1.09
CTHRC1-203ENST00000520337 BCAT1P54687 386 aa8.24□□□□□ -1.09
CTHRC1-203ENST00000520337 OGDHQ02218 1023 aa8.24□□□□□ -1.09
CTHRC1-203ENST00000520337 BST2Q10589 180 aaKnown RBP8.24□□□□□ -1.09
CTHRC1-203ENST00000520337 MESDQ14696 234 aa8.24□□□□□ -1.09
CTHRC1-203ENST00000520337 RPS6KA1Q15418 735 aa8.24□□□□□ -1.09
CTHRC1-203ENST00000520337 PTPROQ16827 1216 aa8.24□□□□□ -1.09
CTHRC1-203ENST00000520337 FAM171A1Q5VUB5 890 aa8.24□□□□□ -1.09
CTHRC1-203ENST00000520337 ZNF365Q70YC5 407 aa8.24□□□□□ -1.09
CTHRC1-203ENST00000520337 OTOP2Q7RTS6 562 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms