RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 MC2RQ01718 297 aa7.95□□□□□ -1.14
SDCBP-208ENST00000520228 SP3Q02447 781 aa7.95□□□□□ -1.14
SDCBP-208ENST00000520228 SCAPQ12770 1279 aa7.95□□□□□ -1.14
SDCBP-208ENST00000520228 SLC13A2Q13183 592 aa7.95□□□□□ -1.14
SDCBP-208ENST00000520228 LSM12Q3MHD2 195 aaKnown RBP7.95□□□□□ -1.14
SDCBP-208ENST00000520228 TTC22Q5TAA0 569 aa7.95□□□□□ -1.14
SDCBP-208ENST00000520228 TMEM179Q6ZVK1 233 aa7.95□□□□□ -1.14
SDCBP-208ENST00000520228 CTU1Q7Z7A3 348 aaKnown RBP7.95□□□□□ -1.14
SDCBP-208ENST00000520228 CLNKQ7Z7G1 428 aa7.95□□□□□ -1.14
SDCBP-208ENST00000520228 C11orf96Q7Z7L8 435 aa7.95□□□□□ -1.14
SDCBP-208ENST00000520228 MICU3Q86XE3 530 aa7.95□□□□□ -1.14
SDCBP-208ENST00000520228 ARHGEF19Q8IW93 802 aa7.95□□□□□ -1.14
SDCBP-208ENST00000520228 PSD4Q8NDX1 1056 aa7.95□□□□□ -1.14
SDCBP-208ENST00000520228 HAS1Q92839 578 aa7.95□□□□□ -1.14
SDCBP-208ENST00000520228 TRIM43Q96BQ3 446 aaPredicted RBP7.95□□□□□ -1.14
SDCBP-208ENST00000520228 PARK7Q99497 189 aaKnown RBP7.95□□□□□ -1.14
SDCBP-208ENST00000520228 NAPBQ9H115 298 aa7.95□□□□□ -1.14
SDCBP-208ENST00000520228 ZNF287Q9HBT7 754 aa7.95□□□□□ -1.14
SDCBP-208ENST00000520228 COL20A1Q9P218 1284 aa7.95□□□□□ -1.14
SDCBP-208ENST00000520228 SLC45A1Q9Y2W3 748 aa7.95□□□□□ -1.14
SDCBP-208ENST00000520228 MTO1Q9Y2Z2 717 aaKnown RBP7.95□□□□□ -1.14
SDCBP-208ENST00000520228 DCLK1O15075 740 aa7.94□□□□□ -1.14
SDCBP-208ENST00000520228 ERN1O75460 977 aaKnown RBP7.94□□□□□ -1.14
SDCBP-208ENST00000520228 CDKL5O76039 1030 aa7.94□□□□□ -1.14
SDCBP-208ENST00000520228 SPDEFO95238 335 aa7.94□□□□□ -1.14
SDCBP-208ENST00000520228 PIK3CBP42338 1070 aa7.94□□□□□ -1.14
SDCBP-208ENST00000520228 VAV2P52735 878 aa7.94□□□□□ -1.14
SDCBP-208ENST00000520228 MXRA7P84157 204 aa7.94□□□□□ -1.14
SDCBP-208ENST00000520228 DYRK1AQ13627 763 aa7.94□□□□□ -1.14
SDCBP-208ENST00000520228 ALX1Q15699 326 aa7.94□□□□□ -1.14
SDCBP-208ENST00000520228 SPDYE7PQ495Y7 208 aa7.94□□□□□ -1.14
SDCBP-208ENST00000520228 TIGD2Q4W5G0 525 aa7.94□□□□□ -1.14
SDCBP-208ENST00000520228 TREML2Q5T2D2 321 aa7.94□□□□□ -1.14
SDCBP-208ENST00000520228 VPS53Q5VIR6 699 aa7.94□□□□□ -1.14
SDCBP-208ENST00000520228 LMBRD2Q68DH5 695 aaPredicted RBP7.94□□□□□ -1.14
SDCBP-208ENST00000520228 TAF2Q6P1X5 1199 aa7.94□□□□□ -1.14
SDCBP-208ENST00000520228 CWC27Q6UX04 472 aaKnown RBP7.94□□□□□ -1.14
SDCBP-208ENST00000520228 ACER1Q8TDN7 264 aa7.94□□□□□ -1.14
SDCBP-208ENST00000520228 RNF31Q96EP0 1072 aa7.94□□□□□ -1.14
SDCBP-208ENST00000520228 ERO1AQ96HE7 468 aa7.94□□□□□ -1.14
SDCBP-208ENST00000520228 NRDE2Q9H7Z3 1164 aa7.94□□□□□ -1.14
SDCBP-208ENST00000520228 UNKLQ9H9P5 680 aaKnown RBP7.94□□□□□ -1.14
SDCBP-208ENST00000520228 XPR1Q9UBH6 696 aa7.94□□□□□ -1.14
SDCBP-208ENST00000520228 AFF4Q9UHB7 1163 aaKnown RBP7.94□□□□□ -1.14
SDCBP-208ENST00000520228 NOX1Q9Y5S8 564 aa7.94□□□□□ -1.14
SDCBP-208ENST00000520228 TBC1D4O60343 1298 aa7.93□□□□□ -1.14
SDCBP-208ENST00000520228 VPS4BO75351 444 aa7.93□□□□□ -1.14
SDCBP-208ENST00000520228 PRDM1O75626 825 aa7.93□□□□□ -1.14
SDCBP-208ENST00000520228 FGAP02671 866 aa7.93□□□□□ -1.14
SDCBP-208ENST00000520228 HSPD1P10809 573 aaKnown RBP7.93□□□□□ -1.14
SDCBP-208ENST00000520228 TNFRSF1AP19438 455 aa7.93□□□□□ -1.14
SDCBP-208ENST00000520228 VIPR2P41587 438 aa7.93□□□□□ -1.14
SDCBP-208ENST00000520228 ICA1Q05084 483 aa7.93□□□□□ -1.14
SDCBP-208ENST00000520228 ARHGEF6Q15052 776 aa7.93□□□□□ -1.14
SDCBP-208ENST00000520228 PKN2Q16513 984 aaKnown RBP7.93□□□□□ -1.14
SDCBP-208ENST00000520228 GEN1Q17RS7 908 aa7.93□□□□□ -1.14
SDCBP-208ENST00000520228 IGFL4Q6B9Z1 124 aa7.93□□□□□ -1.14
SDCBP-208ENST00000520228 SP5Q6BEB4 398 aaPredicted RBP7.93□□□□□ -1.14
SDCBP-208ENST00000520228 IL31Q6EBC2 164 aa7.93□□□□□ -1.14
SDCBP-208ENST00000520228 C17orf99Q6UX52 265 aa7.93□□□□□ -1.14
SDCBP-208ENST00000520228 SLC30A10Q6XR72 485 aa7.93□□□□□ -1.14
SDCBP-208ENST00000520228 ZNF589Q86UQ0 364 aaPredicted RBP7.93□□□□□ -1.14
SDCBP-208ENST00000520228 ZNF444Q8N0Y2 327 aaPredicted RBP7.93□□□□□ -1.14
SDCBP-208ENST00000520228 CD99L2Q8TCZ2 262 aa7.93□□□□□ -1.14
SDCBP-208ENST00000520228 SMCR8Q8TEV9 937 aaPredicted RBP7.93□□□□□ -1.14
SDCBP-208ENST00000520228 SLC39A13Q96H72 371 aa7.93□□□□□ -1.14
SDCBP-208ENST00000520228 HEPHQ9BQS7 1158 aa7.93□□□□□ -1.14
SDCBP-208ENST00000520228 ZNF518BQ9C0D4 1074 aa7.93□□□□□ -1.14
SDCBP-208ENST00000520228 ZNF700Q9H0M5 742 aa7.93□□□□□ -1.14
SDCBP-208ENST00000520228 SMOC2Q9H3U7 446 aa7.93□□□□□ -1.14
SDCBP-208ENST00000520228 OGDHLQ9ULD0 1010 aa7.93□□□□□ -1.14
SDCBP-208ENST00000520228 CCDC171Q6TFL3 1326 aa7.93□□□□□ -1.14
SDCBP-208ENST00000520228 A0A1W2PRG0 241 aa7.92□□□□□ -1.14
SDCBP-208ENST00000520228 NARSO43776 548 aaKnown RBP7.92□□□□□ -1.14
SDCBP-208ENST00000520228 HOXA7P31268 230 aaPredicted RBP7.92□□□□□ -1.14
SDCBP-208ENST00000520228 RPS7P62081 194 aaKnown RBP7.92□□□□□ -1.14
SDCBP-208ENST00000520228 IRX3P78415 501 aaPredicted RBP7.92□□□□□ -1.14
SDCBP-208ENST00000520228 GUCY1B3Q02153 619 aa7.92□□□□□ -1.14
SDCBP-208ENST00000520228 TP53BP2Q13625 1128 aa7.92□□□□□ -1.14
SDCBP-208ENST00000520228 HLXQ14774 488 aaPredicted RBP7.92□□□□□ -1.14
SDCBP-208ENST00000520228 ZXDCQ2QGD7 858 aaPredicted RBP7.92□□□□□ -1.14
SDCBP-208ENST00000520228 CRIP3Q6Q6R5 217 aa7.92□□□□□ -1.14
SDCBP-208ENST00000520228 ADGRG5Q8IZF4 528 aa7.92□□□□□ -1.14
SDCBP-208ENST00000520228 SVIPQ8NHG7 77 aa7.92□□□□□ -1.14
SDCBP-208ENST00000520228 RUFY2Q8WXA3 655 aa7.92□□□□□ -1.14
SDCBP-208ENST00000520228 C12orf42Q96LP6 360 aa7.92□□□□□ -1.14
SDCBP-208ENST00000520228 MLST8Q9BVC4 326 aa7.92□□□□□ -1.14
SDCBP-208ENST00000520228 VPS11Q9H270 941 aa7.92□□□□□ -1.14
SDCBP-208ENST00000520228 SH2D4AQ9H788 454 aa7.92□□□□□ -1.14
SDCBP-208ENST00000520228 SACM1LQ9NTJ5 587 aa7.92□□□□□ -1.14
SDCBP-208ENST00000520228 ANAPC4Q9UJX5 808 aa7.92□□□□□ -1.14
SDCBP-208ENST00000520228 TMX2Q9Y320 296 aa7.92□□□□□ -1.14
SDCBP-208ENST00000520228 TRIM17Q9Y577 477 aa7.92□□□□□ -1.14
SDCBP-208ENST00000520228 PAXBP1Q9Y5B6 917 aa7.92□□□□□ -1.14
SDCBP-208ENST00000520228 ADGRA2Q96PE1 1338 aa7.92□□□□□ -1.14
SDCBP-208ENST00000520228 ROBO3Q96MS0 1386 aa7.92□□□□□ -1.14
SDCBP-208ENST00000520228 DOCK2Q92608 1830 aa7.92□□□□□ -1.14
SDCBP-208ENST00000520228 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.91□□□□□ -1.14
SDCBP-208ENST00000520228 UNC119BA6NIH7 251 aa7.91□□□□□ -1.14
SDCBP-208ENST00000520228 F8W8V4 182 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms