RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 FZD5Q13467 585 aa5.91□□□□□ -1.46
HMGB1P46-201ENST00000520062 THOC5Q13769 683 aaKnown RBP5.91□□□□□ -1.46
HMGB1P46-201ENST00000520062 GPR68Q15743 365 aa5.91□□□□□ -1.46
HMGB1P46-201ENST00000520062 TXNRD1Q16881 649 aa5.91□□□□□ -1.46
HMGB1P46-201ENST00000520062 PLAC9Q5JTB6 97 aa5.91□□□□□ -1.46
HMGB1P46-201ENST00000520062 ERICH6BQ5W0A0 696 aa5.91□□□□□ -1.46
HMGB1P46-201ENST00000520062 DPY19L3Q6ZPD9 716 aa5.91□□□□□ -1.46
HMGB1P46-201ENST00000520062 Q6ZWC4 215 aa5.91□□□□□ -1.46
HMGB1P46-201ENST00000520062 BRINP3Q76B58 766 aa5.91□□□□□ -1.46
HMGB1P46-201ENST00000520062 ARMC8Q8IUR7 673 aa5.91□□□□□ -1.46
HMGB1P46-201ENST00000520062 ADAMTS18Q8TE60 1221 aa5.91□□□□□ -1.46
HMGB1P46-201ENST00000520062 ASB10Q8WXI3 467 aa5.91□□□□□ -1.46
HMGB1P46-201ENST00000520062 RBM17Q96I25 401 aaKnown RBP5.91□□□□□ -1.46
HMGB1P46-201ENST00000520062 FBXL20Q96IG2 436 aa5.91□□□□□ -1.46
HMGB1P46-201ENST00000520062 PRDM13Q9H4Q3 707 aa5.91□□□□□ -1.46
HMGB1P46-201ENST00000520062 CDCP1Q9H5V8 836 aa5.91□□□□□ -1.46
HMGB1P46-201ENST00000520062 ACAD9Q9H845 621 aa5.91□□□□□ -1.46
HMGB1P46-201ENST00000520062 DKK3Q9UBP4 350 aa5.91□□□□□ -1.46
HMGB1P46-201ENST00000520062 AASSQ9UDR5 926 aa5.91□□□□□ -1.46
HMGB1P46-201ENST00000520062 AMFRQ9UKV5 643 aa5.91□□□□□ -1.46
HMGB1P46-201ENST00000520062 RAB21Q9UL25 225 aa5.91□□□□□ -1.46
HMGB1P46-201ENST00000520062 HSF4Q9ULV5 492 aa5.91□□□□□ -1.46
HMGB1P46-201ENST00000520062 SLC12A4Q9UP95 1085 aa5.91□□□□□ -1.46
HMGB1P46-201ENST00000520062 CYP3A7-CYP3A51PA0A087WV96 503 aa5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 A0A0G2JLL6 359 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 AGAP5A6NIR3 686 aa5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 PRSS47A8MTI9 375 aa5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 PLSCR1O15162 318 aa5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 CA12O43570 354 aa5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 RTN3O95197 1032 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 CSF1P09603 554 aa5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 MYCLP12524 364 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 IGFBP2P18065 325 aa5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 CYP3A7P24462 503 aa5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 DUSP1P28562 367 aa5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 PCSK6P29122 969 aa5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 PDE1AP54750 535 aa5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 NAP1L1P55209 391 aaKnown RBP5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 TAS2R50P59544 299 aa5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 DEUP1Q05D60 604 aa5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 CCDC15Q0P6D6 951 aa5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 PRKG2Q13237 762 aa5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 TBC1D25Q3MII6 688 aa5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 USP39Q53GS9 565 aaKnown RBP5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 TMEM63BQ5T3F8 832 aa5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 SPATA1Q5VX52 437 aa5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 ZNF551Q7Z340 670 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 SFTPA1Q8IWL2 248 aa5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 LINS1Q8NG48 757 aa5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 TDRD7Q8NHU6 1098 aaKnown RBP5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 TBC1D22AQ8WUA7 517 aa5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 UCMAQ8WVF2 138 aa5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 SNRNP27Q8WVK2 155 aaKnown RBP5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 HAS1Q92839 578 aa5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 EXTL1Q92935 676 aa5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 ARRDC3Q96B67 414 aa5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 TRMT61AQ96FX7 289 aaKnown RBP5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 AIFM2Q9BRQ8 373 aa5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 FUZQ9BT04 418 aa5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 RNF26Q9BY78 433 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 RMI1Q9H9A7 625 aa5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 SAP30LQ9HAJ7 183 aa5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 SUFUQ9UMX1 484 aa5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 RCE1Q9Y256 329 aa5.9□□□□□ -1.46
HMGB1P46-201ENST00000520062 ANKRD18BA2A2Z9 1011 aa5.89□□□□□ -1.47
HMGB1P46-201ENST00000520062 K7ENM7 598 aa5.89□□□□□ -1.47
HMGB1P46-201ENST00000520062 CES2O00748 559 aa5.89□□□□□ -1.47
HMGB1P46-201ENST00000520062 ANP32CO43423 234 aa5.89□□□□□ -1.47
HMGB1P46-201ENST00000520062 ALDOAP04075 364 aaKnown RBP5.89□□□□□ -1.47
HMGB1P46-201ENST00000520062 CHRM2P08172 466 aa5.89□□□□□ -1.47
HMGB1P46-201ENST00000520062 ACP5P13686 325 aa5.89□□□□□ -1.47
HMGB1P46-201ENST00000520062 TGM1P22735 817 aa5.89□□□□□ -1.47
HMGB1P46-201ENST00000520062 ABCD3P28288 659 aa5.89□□□□□ -1.47
HMGB1P46-201ENST00000520062 GPD2P43304 727 aa5.89□□□□□ -1.47
HMGB1P46-201ENST00000520062 CCT4P50991 539 aaKnown RBP5.89□□□□□ -1.47
HMGB1P46-201ENST00000520062 CLNS1AP54105 237 aaKnown RBP5.89□□□□□ -1.47
HMGB1P46-201ENST00000520062 GALNT2Q10471 571 aa5.89□□□□□ -1.47
HMGB1P46-201ENST00000520062 GPATCH4Q5T3I0 446 aaKnown RBP5.89□□□□□ -1.47
HMGB1P46-201ENST00000520062 CCDC30Q5VVM6 783 aa5.89□□□□□ -1.47
HMGB1P46-201ENST00000520062 ANKRD16Q6P6B7 361 aa5.89□□□□□ -1.47
HMGB1P46-201ENST00000520062 SYNE3Q6ZMZ3 975 aa5.89□□□□□ -1.47
HMGB1P46-201ENST00000520062 CXorf38Q8TB03 319 aa5.89□□□□□ -1.47
HMGB1P46-201ENST00000520062 DVL3Q92997 716 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P46-201ENST00000520062 SH3KBP1Q96B97 665 aa5.89□□□□□ -1.47
HMGB1P46-201ENST00000520062 Q96MF0 132 aa5.89□□□□□ -1.47
HMGB1P46-201ENST00000520062 HERC2P3Q9BVR0 1158 aa5.89□□□□□ -1.47
HMGB1P46-201ENST00000520062 TAOK3Q9H2K8 898 aa5.89□□□□□ -1.47
HMGB1P46-201ENST00000520062 PLEKHA5Q9HAU0 1116 aa5.89□□□□□ -1.47
HMGB1P46-201ENST00000520062 PDE11AQ9HCR9 933 aa5.89□□□□□ -1.47
HMGB1P46-201ENST00000520062 ARHGEF3Q9NR81 526 aa5.89□□□□□ -1.47
HMGB1P46-201ENST00000520062 SERTAD4Q9NUC0 356 aa5.89□□□□□ -1.47
HMGB1P46-201ENST00000520062 SMPD4Q9NXE4 827 aa5.89□□□□□ -1.47
HMGB1P46-201ENST00000520062 CNOT7Q9UIV1 285 aaKnown RBP5.89□□□□□ -1.47
HMGB1P46-201ENST00000520062 CCNL1Q9UK58 526 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P46-201ENST00000520062 ASAP1Q9ULH1 1129 aa5.89□□□□□ -1.47
HMGB1P46-201ENST00000520062 PCDHB2Q9Y5E7 798 aa5.89□□□□□ -1.47
HMGB1P46-201ENST00000520062 TDRD9Q8NDG6 1382 aaKnown RBP5.89□□□□□ -1.47
HMGB1P46-201ENST00000520062 A0A1W2PPH5 198 aa5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 PGPEP1LA6NFU8 196 aa5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 AP4M1O00189 453 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms