RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 LINGO3P0C6S8 592 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 AOC1P19801 751 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 GRK2P25098 689 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 GARSP41250 739 aaKnown RBP11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 GRM5P41594 1212 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 IREB2P48200 963 aaKnown RBP11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 BST2Q10589 180 aaKnown RBP11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 DCAF4L1Q3SXM0 396 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 STEAP4Q687X5 459 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 PRRT2Q7Z6L0 340 aaPredicted RBP11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 ULK2Q8IYT8 1036 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 C7orf31Q8N865 590 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 NRG4Q8WWG1 115 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 CENPIQ92674 756 aaPredicted RBP11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 KHSRPQ92945 711 aaKnown RBP eCLIP11.69□□□□□ -0.544e-6■■■■□ 23.2
NUDCD1-203ENST00000519607 FAM136AQ96C01 138 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 SPATA13Q96N96 652 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 MRPL45Q9BRJ2 306 aaKnown RBP11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 YIPF3Q9GZM5 350 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 MROH8Q9H579 483 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 ARHGEF4Q9NR80 690 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 SPATS2LQ9NUQ6 558 aaKnown RBP11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 WDR27A2RRH5 827 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 HMX2A2RU54 273 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 CXCL11O14625 94 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 TSPAN1O60635 241 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 ZNF189O75820 626 aaPredicted RBP11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 CNMDO75829 334 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 LGALS2P05162 132 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 MYL4P12829 197 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 PGAM1P18669 254 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 PEX19P40855 299 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 SLC1A6P48664 564 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 ACTR3P61158 418 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 SLC10A2Q12908 348 aaPredicted RBP11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 GRIK3Q13003 919 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 HIC1Q14526 733 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 GSTA3Q16772 222 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 INSCQ1MX18 579 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 MDH1BQ5I0G3 518 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 ARHGAP17Q68EM7 881 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 LRRC8BQ6P9F7 803 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 DENND5BQ6ZUT9 1274 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 ADGRF2Q8IZF7 708 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 BEST2Q8NFU1 509 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 CNKSR2Q8WXI2 1034 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 FGD4Q96M96 766 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 CSPG4P5Q96PW8 444 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 APOL6Q9BWW8 343 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 B3GNT5Q9BYG0 378 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 SLC24A3Q9HC58 644 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 GPAMQ9HCL2 828 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 EIF2B3Q9NR50 452 aaKnown RBP11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 NDE1Q9NXR1 346 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 DLGAP2Q9P1A6 1054 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 RCOR3Q9P2K3 495 aaPredicted RBP11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 GTF2IRD1Q9UHL9 959 aa11.69□□□□□ -0.54
NUDCD1-203ENST00000519607 PLXNA1Q9UIW2 1896 aa11.68□□□□□ -0.54
NUDCD1-203ENST00000519607 PRR5-ARHGAP8B1AHC4 643 aa11.68□□□□□ -0.54
NUDCD1-203ENST00000519607 PPP1R12AO14974 1030 aaPredicted RBP11.68□□□□□ -0.54
NUDCD1-203ENST00000519607 OPHN1O60890 802 aa11.68□□□□□ -0.54
NUDCD1-203ENST00000519607 SMIM24O75264 130 aa11.68□□□□□ -0.54
NUDCD1-203ENST00000519607 ANPEPP15144 967 aa11.68□□□□□ -0.54
NUDCD1-203ENST00000519607 AMPD1P23109 780 aa11.68□□□□□ -0.54
NUDCD1-203ENST00000519607 BCAT1P54687 386 aa11.68□□□□□ -0.54
NUDCD1-203ENST00000519607 IRX4P78413 519 aa11.68□□□□□ -0.54
NUDCD1-203ENST00000519607 ARHGAP8P85298 464 aa11.68□□□□□ -0.54
NUDCD1-203ENST00000519607 HSF5Q4G112 596 aaPredicted RBP11.68□□□□□ -0.54
NUDCD1-203ENST00000519607 EFHC1Q5JVL4 640 aa11.68□□□□□ -0.54
NUDCD1-203ENST00000519607 N4BP2L1Q5TBK1 243 aaPredicted RBP11.68□□□□□ -0.54
NUDCD1-203ENST00000519607 RIPOR1Q6ZS17 1223 aa11.68□□□□□ -0.54
NUDCD1-203ENST00000519607 ZCCHC23Q6ZST2 131 aa11.68□□□□□ -0.54
NUDCD1-203ENST00000519607 RFX8Q6ZV50 586 aa11.68□□□□□ -0.54
NUDCD1-203ENST00000519607 STRADAQ7RTN6 431 aa11.68□□□□□ -0.54
NUDCD1-203ENST00000519607 LRRC52Q8N7C0 313 aa11.68□□□□□ -0.54
NUDCD1-203ENST00000519607 LINC01465Q8N7H1 131 aa11.68□□□□□ -0.54
NUDCD1-203ENST00000519607 ANKRD52Q8NB46 1076 aa11.68□□□□□ -0.54
NUDCD1-203ENST00000519607 COLGALT1Q8NBJ5 622 aa11.68□□□□□ -0.54
NUDCD1-203ENST00000519607 LRRN4Q8WUT4 740 aa11.68□□□□□ -0.54
NUDCD1-203ENST00000519607 SREK1Q8WXA9 508 aaKnown RBP11.68□□□□□ -0.54
NUDCD1-203ENST00000519607 OTUD5Q96G74 571 aa11.68□□□□□ -0.54
NUDCD1-203ENST00000519607 CLMNQ96JQ2 1002 aa11.68□□□□□ -0.54
NUDCD1-203ENST00000519607 TSC22D3Q99576 134 aa11.68□□□□□ -0.54
NUDCD1-203ENST00000519607 ZNF395Q9H8N7 513 aaPredicted RBP11.68□□□□□ -0.54
NUDCD1-203ENST00000519607 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.68□□□□□ -0.54
NUDCD1-203ENST00000519607 DTLQ9NZJ0 730 aa11.68□□□□□ -0.54
NUDCD1-203ENST00000519607 PLA2G4CQ9UP65 541 aa11.68□□□□□ -0.54
NUDCD1-203ENST00000519607 DNAJC16Q9Y2G8 782 aa11.68□□□□□ -0.54
NUDCD1-203ENST00000519607 DCAF8L1A6NGE4 600 aa11.67□□□□□ -0.54
NUDCD1-203ENST00000519607 SERPINE1P05121 402 aa11.67□□□□□ -0.54
NUDCD1-203ENST00000519607 POLBP06746 335 aa11.67□□□□□ -0.54
NUDCD1-203ENST00000519607 MX2P20592 715 aa11.67□□□□□ -0.54
NUDCD1-203ENST00000519607 CCNHP51946 323 aaPredicted RBP11.67□□□□□ -0.54
NUDCD1-203ENST00000519607 DSG1Q02413 1049 aa11.67□□□□□ -0.54
NUDCD1-203ENST00000519607 FAM182AQ5T1J6 154 aa11.67□□□□□ -0.54
NUDCD1-203ENST00000519607 NCBP2-AS2Q69YL0 99 aa11.67□□□□□ -0.54
NUDCD1-203ENST00000519607 AAGABQ6PD74 315 aa11.67□□□□□ -0.54
NUDCD1-203ENST00000519607 MTHFD1LQ6UB35 978 aa11.67□□□□□ -0.54
NUDCD1-203ENST00000519607 PACS1Q6VY07 963 aa11.67□□□□□ -0.54
NUDCD1-203ENST00000519607 ZNF410Q86VK4 478 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms