RNA–Protein interactions for RNA: ENST00000519534.1

CHTF8-206, Transcript of chromosome transmission fidelity factor 8, human

TSL 2

Gene CHTF8, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHTF8-206	ENST00000519534	C15orf59	Q2T9L4	293 aa	Predicted RBP	11.21	□□□□□ -0.61
CHTF8-206	ENST00000519534	C5orf22	Q49AR2	442 aa		11.21	□□□□□ -0.61
CHTF8-206	ENST00000519534	ZC3H12A	Q5D1E8	599 aa	Known RBP	11.21	□□□□□ -0.61
CHTF8-206	ENST00000519534	ERMARD	Q5T6L9	678 aa		11.21	□□□□□ -0.61
CHTF8-206	ENST00000519534	VIT	Q6UXI7	678 aa		11.21	□□□□□ -0.61
CHTF8-206	ENST00000519534	VSIG1	Q86XK7	387 aa		11.21	□□□□□ -0.61
CHTF8-206	ENST00000519534	SLC44A3	Q8N4M1	653 aa		11.21	□□□□□ -0.61
CHTF8-206	ENST00000519534	ARFGAP1	Q8N6T3	406 aa		11.21	□□□□□ -0.61
CHTF8-206	ENST00000519534	ZNF557	Q8N988	423 aa	Predicted RBP	11.21	□□□□□ -0.61
CHTF8-206	ENST00000519534	KIAA1524	Q8TCG1	905 aa		11.21	□□□□□ -0.61
CHTF8-206	ENST00000519534	FGF14	Q92915	247 aa		11.21	□□□□□ -0.61
CHTF8-206	ENST00000519534	IRF7	Q92985	503 aa		11.21	□□□□□ -0.61
CHTF8-206	ENST00000519534	RNF34	Q969K3	372 aa		11.21	□□□□□ -0.61
CHTF8-206	ENST00000519534	ZNF830	Q96NB3	372 aa	Predicted RBP	11.21	□□□□□ -0.61
CHTF8-206	ENST00000519534	LRRC3B	Q96PB8	259 aa		11.21	□□□□□ -0.61
CHTF8-206	ENST00000519534	ADAM33	Q9BZ11	813 aa		11.21	□□□□□ -0.61
CHTF8-206	ENST00000519534	TKTL2	Q9H0I9	626 aa		11.21	□□□□□ -0.61
CHTF8-206	ENST00000519534	PRDM16	Q9HAZ2	1276 aa		11.21	□□□□□ -0.61
CHTF8-206	ENST00000519534	DONSON	Q9NYP3	566 aa		11.21	□□□□□ -0.61
CHTF8-206	ENST00000519534	CALCOCO1	Q9P1Z2	691 aa		11.21	□□□□□ -0.61
CHTF8-206	ENST00000519534	CFAP97	Q9P2B7	532 aa		11.21	□□□□□ -0.61
CHTF8-206	ENST00000519534	LIMD1	Q9UGP4	676 aa		11.21	□□□□□ -0.61
CHTF8-206	ENST00000519534	SALL4	Q9UJQ4	1053 aa		11.21	□□□□□ -0.61
CHTF8-206	ENST00000519534	AGO1	Q9UL18	857 aa	Known RBP	11.21	□□□□□ -0.61
CHTF8-206	ENST00000519534	USP18	Q9UMW8	372 aa		11.21	□□□□□ -0.61
CHTF8-206	ENST00000519534	CCL26	Q9Y258	94 aa		11.21	□□□□□ -0.61
CHTF8-206	ENST00000519534	ALG6	Q9Y672	507 aa		11.21	□□□□□ -0.61
CHTF8-206	ENST00000519534	DUSP10	Q9Y6W6	482 aa		11.21	□□□□□ -0.61
CHTF8-206	ENST00000519534	PATJ	Q8NI35	1801 aa		11.21	□□□□□ -0.62
CHTF8-206	ENST00000519534	NOTCH4	Q99466	2003 aa		11.2	□□□□□ -0.62
CHTF8-206	ENST00000519534	GREB1	Q4ZG55	1949 aa		11.2	□□□□□ -0.62
CHTF8-206	ENST00000519534	MSI1	O43347	362 aa	Known RBP	11.2	□□□□□ -0.62
CHTF8-206	ENST00000519534	BUB1B	O60566	1050 aa	Predicted RBP	11.2	□□□□□ -0.62
CHTF8-206	ENST00000519534	TFE3	P19532	575 aa	Predicted RBP	11.2	□□□□□ -0.62
CHTF8-206	ENST00000519534	MIP	P30301	263 aa		11.2	□□□□□ -0.62
CHTF8-206	ENST00000519534	CORO1A	P31146	461 aa	Known RBP	11.2	□□□□□ -0.62
CHTF8-206	ENST00000519534	L1CAM	P32004	1257 aa		11.2	□□□□□ -0.62
CHTF8-206	ENST00000519534	HCAR3	P49019	387 aa		11.2	□□□□□ -0.62
CHTF8-206	ENST00000519534	NAP1L1	P55209	391 aa	Known RBP	11.2	□□□□□ -0.62
CHTF8-206	ENST00000519534	AMPD2	Q01433	879 aa		11.2	□□□□□ -0.62
CHTF8-206	ENST00000519534	PFKP	Q01813	784 aa		11.2	□□□□□ -0.62
CHTF8-206	ENST00000519534	NR1H3	Q13133	447 aa		11.2	□□□□□ -0.62
CHTF8-206	ENST00000519534	TDG	Q13569	410 aa		11.2	□□□□□ -0.62
CHTF8-206	ENST00000519534	TJAP1	Q5JTD0	557 aa		11.2	□□□□□ -0.62
CHTF8-206	ENST00000519534	SH3PXD2A	Q5TCZ1	1133 aa		11.2	□□□□□ -0.62
CHTF8-206	ENST00000519534	C1orf228	Q6PIY5	440 aa		11.2	□□□□□ -0.62
CHTF8-206	ENST00000519534	REXO1L1P	Q8IX06	675 aa		11.2	□□□□□ -0.62
CHTF8-206	ENST00000519534	YAF2	Q8IY57	180 aa		11.2	□□□□□ -0.62
CHTF8-206	ENST00000519534	LRRC57	Q8N9N7	239 aa		11.2	□□□□□ -0.62
CHTF8-206	ENST00000519534	TRIM58	Q8NG06	486 aa		11.2	□□□□□ -0.62
CHTF8-206	ENST00000519534	ADAM32	Q8TC27	787 aa		11.2	□□□□□ -0.62
CHTF8-206	ENST00000519534	FAM71B	Q8TC56	605 aa		11.2	□□□□□ -0.62
CHTF8-206	ENST00000519534	DNASE1L2	Q92874	299 aa		11.2	□□□□□ -0.62
CHTF8-206	ENST00000519534	RSPRY1	Q96DX4	576 aa		11.2	□□□□□ -0.62
CHTF8-206	ENST00000519534	TRIM44	Q96DX7	344 aa	Predicted RBP	11.2	□□□□□ -0.62
CHTF8-206	ENST00000519534	MSANTD3	Q96H12	275 aa		11.2	□□□□□ -0.62
CHTF8-206	ENST00000519534	TRIM7	Q9C029	511 aa		11.2	□□□□□ -0.62
CHTF8-206	ENST00000519534	SLC2A4RG	Q9NR83	387 aa		11.2	□□□□□ -0.62
CHTF8-206	ENST00000519534	SMPD4	Q9NXE4	827 aa		11.2	□□□□□ -0.62
CHTF8-206	ENST00000519534	MARK1	Q9P0L2	795 aa		11.2	□□□□□ -0.62
CHTF8-206	ENST00000519534	NUMBL	Q9Y6R0	609 aa		11.2	□□□□□ -0.62
CHTF8-206	ENST00000519534	BRWD1	Q9NSI6	2320 aa		11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	IGLV3-10	A0A075B6K4	115 aa		11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	DRGX	A6NNA5	263 aa		11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	MIF4GD	A9UHW6	222 aa	Known RBP	11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	ZNF487	B1APH4	448 aa		11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	PAGE1	O75459	146 aa		11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	NFATC1	O95644	943 aa		11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	MSN	P26038	577 aa	Known RBP	11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	IFNAR2	P48551	515 aa		11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	CLCN6	P51797	869 aa		11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	SLC25A11	Q02978	314 aa	Known RBP	11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	MESD	Q14696	234 aa		11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	PDK2	Q15119	407 aa		11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	CDO1	Q16878	200 aa		11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	EML3	Q32P44	896 aa		11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	MPPE1	Q53F39	396 aa		11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	EFHC2	Q5JST6	749 aa		11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	TTC39B	Q5VTQ0	682 aa	Predicted RBP	11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	RNF43	Q68DV7	783 aa		11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	LRRC31	Q6UY01	552 aa		11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	FAM131B	Q86XD5	332 aa		11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	DENND1C	Q8IV53	801 aa		11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	MAP7D3	Q8IWC1	876 aa		11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	RHOT1	Q8IXI2	618 aa		11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	CCAR2	Q8N163	923 aa	Known RBP	11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	ATP2A3	Q93084	1043 aa		11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	PRMT1	Q99873	361 aa	Known RBP	11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	SLC2A11	Q9BYW1	496 aa		11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	PLA2G2F	Q9BZM2	168 aa		11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	SMG9	Q9H0W8	520 aa	Known RBP	11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	DUS2	Q9NX74	493 aa	Known RBP	11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	DDX56	Q9NY93	547 aa	Known RBP	11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	RCOR3	Q9P2K3	495 aa	Predicted RBP	11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	PPARGC1A	Q9UBK2	798 aa	Known RBP	11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	FZD10	Q9ULW2	581 aa		11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
CHTF8-206	ENST00000519534	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	11.19	□□□□□ -0.62	1e-8	■■■■■ 27.1
CHTF8-206	ENST00000519534	REV3L	O60673	3130 aa		11.18	□□□□□ -0.62
CHTF8-206	ENST00000519534	CCDC66	A2RUB6	948 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms