RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 SLC2A13Q96QE2 648 aa13.85□□□□□ -0.19
VEGFA-219ENST00000518824 XPO6Q96QU8 1125 aaKnown RBP13.85□□□□□ -0.19
VEGFA-219ENST00000518824 PCDHB18PQ96TA0 734 aa13.85□□□□□ -0.19
VEGFA-219ENST00000518824 FAM126AQ9BYI3 521 aaPredicted RBP13.85□□□□□ -0.19
VEGFA-219ENST00000518824 TPSD1Q9BZJ3 242 aa13.85□□□□□ -0.19
VEGFA-219ENST00000518824 NUCKS1Q9H1E3 243 aaKnown RBP13.85□□□□□ -0.19
VEGFA-219ENST00000518824 EPC1Q9H2F5 836 aa13.85□□□□□ -0.19
VEGFA-219ENST00000518824 POPDC2Q9HBU9 364 aa13.85□□□□□ -0.19
VEGFA-219ENST00000518824 RTN4Q9NQC3 1192 aaKnown RBP13.85□□□□□ -0.19
VEGFA-219ENST00000518824 SMG5Q9UPR3 1016 aaKnown RBP13.85□□□□□ -0.19
VEGFA-219ENST00000518824 OTOGLQ3ZCN5 2332 aa13.85□□□□□ -0.19
VEGFA-219ENST00000518824 RIF1Q5UIP0 2472 aaKnown RBP13.84□□□□□ -0.19
VEGFA-219ENST00000518824 SYNJ2BP-COX16A0A087WUM0 186 aa13.84□□□□□ -0.19
VEGFA-219ENST00000518824 CAPN9O14815 690 aa13.84□□□□□ -0.19
VEGFA-219ENST00000518824 MOCS2O96007 188 aaPredicted RBP13.84□□□□□ -0.19
VEGFA-219ENST00000518824 TPM2P07951 284 aa13.84□□□□□ -0.19
VEGFA-219ENST00000518824 NRLP54845 237 aa13.84□□□□□ -0.19
VEGFA-219ENST00000518824 SLC6A3Q01959 620 aa13.84□□□□□ -0.19
VEGFA-219ENST00000518824 RING1Q06587 406 aa13.84□□□□□ -0.19
VEGFA-219ENST00000518824 CRY1Q16526 586 aa13.84□□□□□ -0.19
VEGFA-219ENST00000518824 ADGRF1Q5T601 910 aa13.84□□□□□ -0.19
VEGFA-219ENST00000518824 NAA35Q5VZE5 725 aa13.84□□□□□ -0.19
VEGFA-219ENST00000518824 PRR23BQ6ZRT6 265 aa13.84□□□□□ -0.19
VEGFA-219ENST00000518824 XYLT1Q86Y38 959 aa13.84□□□□□ -0.19
VEGFA-219ENST00000518824 TMEM35BQ8NCS4 154 aa13.84□□□□□ -0.19
VEGFA-219ENST00000518824 NEK11Q8NG66 645 aa13.84□□□□□ -0.19
VEGFA-219ENST00000518824 SORCS1Q8WY21 1168 aa13.84□□□□□ -0.19
VEGFA-219ENST00000518824 ACDQ96AP0 544 aa13.84□□□□□ -0.19
VEGFA-219ENST00000518824 NAT10Q9H0A0 1025 aaKnown RBP13.84□□□□□ -0.19
VEGFA-219ENST00000518824 PDCL3Q9H2J4 239 aa13.84□□□□□ -0.19
VEGFA-219ENST00000518824 SEMA4AQ9H3S1 761 aa13.84□□□□□ -0.19
VEGFA-219ENST00000518824 CACNA2D2Q9NY47 1150 aa13.84□□□□□ -0.19
VEGFA-219ENST00000518824 COX16Q9P0S2 106 aa13.84□□□□□ -0.19
VEGFA-219ENST00000518824 TLR6Q9Y2C9 796 aa13.84□□□□□ -0.19
VEGFA-219ENST00000518824 FAM186AA6NE01 2351 aa13.83□□□□□ -0.19
VEGFA-219ENST00000518824 SDK1Q7Z5N4 2213 aa13.83□□□□□ -0.2
VEGFA-219ENST00000518824 SMTNL1A8MU46 457 aa13.83□□□□□ -0.2
VEGFA-219ENST00000518824 AXIN1O15169 862 aa13.83□□□□□ -0.2
VEGFA-219ENST00000518824 SART1O43290 800 aaKnown RBP13.83□□□□□ -0.2
VEGFA-219ENST00000518824 GJB6O95452 261 aa13.83□□□□□ -0.2
VEGFA-219ENST00000518824 HLA-FP30511 346 aa13.83□□□□□ -0.2
VEGFA-219ENST00000518824 GABRB2P47870 512 aa13.83□□□□□ -0.2
VEGFA-219ENST00000518824 ATXN1P54253 815 aaKnown RBP13.83□□□□□ -0.2
VEGFA-219ENST00000518824 RNASE9P60153 205 aaKnown RBP13.83□□□□□ -0.2
VEGFA-219ENST00000518824 RPS24P62847 133 aaKnown RBP13.83□□□□□ -0.2
VEGFA-219ENST00000518824 ARID5AQ03989 594 aa13.83□□□□□ -0.2
VEGFA-219ENST00000518824 SIM2Q14190 667 aaPredicted RBP13.83□□□□□ -0.2
VEGFA-219ENST00000518824 ZSCAN23Q3MJ62 389 aa13.83□□□□□ -0.2
VEGFA-219ENST00000518824 PIK3R6Q5UE93 754 aa13.83□□□□□ -0.2
VEGFA-219ENST00000518824 ANO7Q6IWH7 933 aa13.83□□□□□ -0.2
VEGFA-219ENST00000518824 KIAA1211LQ6NV74 962 aa13.83□□□□□ -0.2
VEGFA-219ENST00000518824 BEND5Q7L4P6 421 aa13.83□□□□□ -0.2
VEGFA-219ENST00000518824 SLC26A9Q7LBE3 791 aa13.83□□□□□ -0.2
VEGFA-219ENST00000518824 CFAP52Q8N1V2 620 aa13.83□□□□□ -0.2
VEGFA-219ENST00000518824 CAMKK1Q8N5S9 505 aa13.83□□□□□ -0.2
VEGFA-219ENST00000518824 FRMD1Q8N878 549 aa13.83□□□□□ -0.2
VEGFA-219ENST00000518824 ANKRD20A12PQ8NF67 263 aa13.83□□□□□ -0.2
VEGFA-219ENST00000518824 MDGA1Q8NFP4 955 aa13.83□□□□□ -0.2
VEGFA-219ENST00000518824 TSTD1Q8NFU3 115 aa13.83□□□□□ -0.2
VEGFA-219ENST00000518824 SLC30A5Q8TAD4 765 aa13.83□□□□□ -0.2
VEGFA-219ENST00000518824 OLIG1Q8TAK6 271 aa13.83□□□□□ -0.2
VEGFA-219ENST00000518824 TMA16Q96EY4 203 aaKnown RBP13.83□□□□□ -0.2
VEGFA-219ENST00000518824 SERPINB11Q96P15 392 aa13.83□□□□□ -0.2
VEGFA-219ENST00000518824 SPAG5Q96R06 1193 aa13.83□□□□□ -0.2
VEGFA-219ENST00000518824 CD248Q9HCU0 757 aa13.83□□□□□ -0.2
VEGFA-219ENST00000518824 ANLNQ9NQW6 1124 aa13.83□□□□□ -0.2
VEGFA-219ENST00000518824 STIM2Q9P246 746 aa13.83□□□□□ -0.2
VEGFA-219ENST00000518824 SLC27A6Q9Y2P4 619 aa13.83□□□□□ -0.2
VEGFA-219ENST00000518824 STARD13Q9Y3M8 1113 aa13.83□□□□□ -0.2
VEGFA-219ENST00000518824 RAD54BQ9Y620 910 aa13.83□□□□□ -0.2
VEGFA-219ENST00000518824 EP300Q09472 2414 aaPredicted RBP13.83□□□□□ -0.2
VEGFA-219ENST00000518824 A0A1W2PQF6 199 aa13.82□□□□□ -0.2
VEGFA-219ENST00000518824 GOLGA8SH3BPF8 625 aa13.82□□□□□ -0.2
VEGFA-219ENST00000518824 I6L893 689 aaPredicted RBP13.82□□□□□ -0.2
VEGFA-219ENST00000518824 TBL1XO60907 577 aa13.82□□□□□ -0.2
VEGFA-219ENST00000518824 HSF2BPO75031 334 aa13.82□□□□□ -0.2
VEGFA-219ENST00000518824 DAB1O75553 588 aa13.82□□□□□ -0.2
VEGFA-219ENST00000518824 APBB3O95704 486 aa13.82□□□□□ -0.2
VEGFA-219ENST00000518824 LATS1O95835 1130 aa13.82□□□□□ -0.2
VEGFA-219ENST00000518824 CYP1A1P04798 512 aaPredicted RBP13.82□□□□□ -0.2
VEGFA-219ENST00000518824 GGCXP38435 758 aa13.82□□□□□ -0.2
VEGFA-219ENST00000518824 STAT1P42224 750 aa13.82□□□□□ -0.2
VEGFA-219ENST00000518824 NUMBP49757 651 aa13.82□□□□□ -0.2
VEGFA-219ENST00000518824 DGKEP52429 567 aa13.82□□□□□ -0.2
VEGFA-219ENST00000518824 CDR2Q01850 454 aa13.82□□□□□ -0.2
VEGFA-219ENST00000518824 NNTQ13423 1086 aa13.82□□□□□ -0.2
VEGFA-219ENST00000518824 MPPE1Q53F39 396 aa13.82□□□□□ -0.2
VEGFA-219ENST00000518824 RAB6CQ53S08 254 aa13.82□□□□□ -0.2
VEGFA-219ENST00000518824 EFHC1Q5JVL4 640 aa13.82□□□□□ -0.2
VEGFA-219ENST00000518824 E4F1Q66K89 784 aaPredicted RBP13.82□□□□□ -0.2
VEGFA-219ENST00000518824 RAP1GAP2Q684P5 730 aa13.82□□□□□ -0.2
VEGFA-219ENST00000518824 NUGGCQ68CJ6 796 aa13.82□□□□□ -0.2
VEGFA-219ENST00000518824 SMYD5Q6GMV2 418 aa13.82□□□□□ -0.2
VEGFA-219ENST00000518824 KBTBD6Q86V97 674 aa13.82□□□□□ -0.2
VEGFA-219ENST00000518824 RASSF3Q86WH2 238 aa13.82□□□□□ -0.2
VEGFA-219ENST00000518824 ERICH1Q86X53 443 aa13.82□□□□□ -0.2
VEGFA-219ENST00000518824 UNC45BQ8IWX7 931 aa13.82□□□□□ -0.2
VEGFA-219ENST00000518824 BAP1Q92560 729 aa13.82□□□□□ -0.2
VEGFA-219ENST00000518824 C18orf8Q96DM3 657 aa13.82□□□□□ -0.2
VEGFA-219ENST00000518824 LMLNQ96KR4 655 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms