RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 FAM43BQ6ZT52 329 aaPredicted RBP6.13□□□□□ -1.43
CD47-205ENST00000517766 CEP128Q6ZU80 1094 aa6.13□□□□□ -1.43
CD47-205ENST00000517766 ACAD11Q709F0 780 aa6.13□□□□□ -1.43
CD47-205ENST00000517766 CROCCP2Q86T23 111 aa6.13□□□□□ -1.43
CD47-205ENST00000517766 RNF180Q86T96 592 aa6.13□□□□□ -1.43
CD47-205ENST00000517766 CRYBG2Q8N1P7 616 aa6.13□□□□□ -1.43
CD47-205ENST00000517766 AGGF1Q8N302 714 aaeCLIP6.13□□□□□ -1.43
CD47-205ENST00000517766 SMG8Q8ND04 991 aaKnown RBP6.13□□□□□ -1.43
CD47-205ENST00000517766 APPL2Q8NEU8 664 aa6.13□□□□□ -1.43
CD47-205ENST00000517766 SPATA18Q8TC71 538 aa6.13□□□□□ -1.43
CD47-205ENST00000517766 C18orf25Q96B23 403 aaPredicted RBP6.13□□□□□ -1.43
CD47-205ENST00000517766 PGBD4Q96DM1 585 aa6.13□□□□□ -1.43
CD47-205ENST00000517766 SHDQ96IW2 340 aa6.13□□□□□ -1.43
CD47-205ENST00000517766 TNIP3Q96KP6 325 aa6.13□□□□□ -1.43
CD47-205ENST00000517766 CAPNS2Q96L46 248 aa6.13□□□□□ -1.43
CD47-205ENST00000517766 SLITRK1Q96PX8 696 aa6.13□□□□□ -1.43
CD47-205ENST00000517766 CPXM1Q96SM3 734 aa6.13□□□□□ -1.43
CD47-205ENST00000517766 FMO2Q99518 471 aa6.13□□□□□ -1.43
CD47-205ENST00000517766 MRPL45Q9BRJ2 306 aaKnown RBP6.13□□□□□ -1.43
CD47-205ENST00000517766 SEZ6LQ9BYH1 1024 aa6.13□□□□□ -1.43
CD47-205ENST00000517766 TRIM7Q9C029 511 aa6.13□□□□□ -1.43
CD47-205ENST00000517766 DCLK3Q9C098 648 aa6.13□□□□□ -1.43
CD47-205ENST00000517766 SENP6Q9GZR1 1112 aaPredicted RBP6.13□□□□□ -1.43
CD47-205ENST00000517766 TSPYL1Q9H0U9 437 aa6.13□□□□□ -1.43
CD47-205ENST00000517766 DPH5Q9H2P9 285 aa6.13□□□□□ -1.43
CD47-205ENST00000517766 SNX25Q9H3E2 840 aa6.13□□□□□ -1.43
CD47-205ENST00000517766 UBN1Q9NPG3 1134 aa6.13□□□□□ -1.43
CD47-205ENST00000517766 KRT82Q9NSB4 513 aa6.13□□□□□ -1.43
CD47-205ENST00000517766 PSD3Q9NYI0 1048 aa6.13□□□□□ -1.43
CD47-205ENST00000517766 NOP53Q9NZM5 478 aaKnown RBP6.13□□□□□ -1.43
CD47-205ENST00000517766 HMGXB4Q9UGU5 601 aa6.13□□□□□ -1.43
CD47-205ENST00000517766 SRRDQ9UH36 339 aa6.13□□□□□ -1.43
CD47-205ENST00000517766 CYTH4Q9UIA0 394 aa6.13□□□□□ -1.43
CD47-205ENST00000517766 ST3GAL5Q9UNP4 418 aa6.13□□□□□ -1.43
CD47-205ENST00000517766 GIT1Q9Y2X7 761 aa6.13□□□□□ -1.43
CD47-205ENST00000517766 NR2E1Q9Y466 385 aa6.13□□□□□ -1.43
CD47-205ENST00000517766 HES2Q9Y543 173 aa6.13□□□□□ -1.43
CD47-205ENST00000517766 ARHGEF37A1IGU5 675 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 GOLGA6L10A6NI86 522 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 A6NNZ2 444 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 F8VP50 259 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 H3BQF6 201 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 AGPSO00116 658 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 POLR3GO15318 223 aaPredicted RBP6.12□□□□□ -1.43
CD47-205ENST00000517766 ZNF623O75123 536 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 ALX3O95076 343 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 GJB6O95452 261 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 SYF2O95926 243 aaKnown RBP6.12□□□□□ -1.43
CD47-205ENST00000517766 CHRNA1P02708 482 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 THP07101 528 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 FAM153BP0C7A2 387 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 RALAP11233 206 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 DRD2P14416 443 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 ITIH2P19823 946 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 CCND3P30281 292 aaPredicted RBP6.12□□□□□ -1.43
CD47-205ENST00000517766 RPL9P32969 192 aaKnown RBP6.12□□□□□ -1.43
CD47-205ENST00000517766 RFC1P35251 1148 aaPredicted RBP6.12□□□□□ -1.43
CD47-205ENST00000517766 THPOP40225 353 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 ZNF143P52747 638 aaPredicted RBP6.12□□□□□ -1.43
CD47-205ENST00000517766 BCAT1P54687 386 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 SLC8A3P57103 927 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 LILRA4P59901 499 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 SLC6A3Q01959 620 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 OGDHQ02218 1023 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 BST2Q10589 180 aaKnown RBP6.12□□□□□ -1.43
CD47-205ENST00000517766 CALCOCO2Q13137 446 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 ITGA7Q13683 1181 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 COL9A2Q14055 689 aaPredicted RBP6.12□□□□□ -1.43
CD47-205ENST00000517766 SLMAPQ14BN4 828 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 TERF2Q15554 542 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 KCNA10Q16322 511 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 SOWAHAQ2M3V2 549 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 TUBB8Q3ZCM7 444 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 FAM153CQ494X1 144 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 TFDP3Q5H9I0 405 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 FAM102AQ5T9C2 384 aaPredicted RBP6.12□□□□□ -1.43
CD47-205ENST00000517766 MAP3K21Q5TCX8 1036 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 CCSAPQ6IQ19 270 aaPredicted RBP6.12□□□□□ -1.43
CD47-205ENST00000517766 TTC27Q6P3X3 843 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 SPOCD1Q6ZMY3 1216 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 ARCQ7LC44 396 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 LIMS2Q7Z4I7 341 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 MRPL10Q7Z7H8 261 aaKnown RBP6.12□□□□□ -1.43
CD47-205ENST00000517766 TMEM110Q86TL2 294 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 ACOT1Q86TX2 421 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 DDX42Q86XP3 938 aaKnown RBP eCLIP6.12□□□□□ -1.43
CD47-205ENST00000517766 CPNE8Q86YQ8 564 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 ZDHHC14Q8IZN3 488 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 IQCKQ8N0W5 287 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 TMEM86AQ8N2M4 240 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 CCDC89Q8N998 374 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 ANKRD52Q8NB46 1076 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 JOSD2Q8TAC2 188 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 UBA3Q8TBC4 463 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 RAET1EQ8TD07 263 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 PPP1R13LQ8WUF5 828 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 SLC35F5Q8WV83 523 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 EXOC4Q96A65 974 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 HSFY1Q96LI6 401 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 GDAP1L1Q96MZ0 367 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms