RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 SP2Q02086 613 aa12.75□□□□□ -0.37
PCM1-203ENST00000517545 CAPSQ13938 189 aa12.75□□□□□ -0.37
PCM1-203ENST00000517545 TFDP2Q14188 446 aa12.75□□□□□ -0.37
PCM1-203ENST00000517545 KRT81Q14533 505 aa12.75□□□□□ -0.37
PCM1-203ENST00000517545 PPP6R3Q5H9R7 873 aaPredicted RBP12.75□□□□□ -0.37
PCM1-203ENST00000517545 SCYL2Q6P3W7 929 aa12.75□□□□□ -0.37
PCM1-203ENST00000517545 SLC4A11Q8NBS3 891 aa12.75□□□□□ -0.37
PCM1-203ENST00000517545 APBB2Q92870 758 aa12.75□□□□□ -0.37
PCM1-203ENST00000517545 LHX5Q9H2C1 402 aa12.75□□□□□ -0.37
PCM1-203ENST00000517545 DHX33Q9H6R0 707 aaKnown RBP12.75□□□□□ -0.37
PCM1-203ENST00000517545 ZBTB12Q9Y330 459 aaPredicted RBP12.75□□□□□ -0.37
PCM1-203ENST00000517545 CTDP1Q9Y5B0 961 aaPredicted RBP12.75□□□□□ -0.37
PCM1-203ENST00000517545 PSAT1Q9Y617 370 aa12.75□□□□□ -0.37
PCM1-203ENST00000517545 ZNF646O15015 1829 aaPredicted RBP12.74□□□□□ -0.37
PCM1-203ENST00000517545 WDR46O15213 610 aaKnown RBP12.74□□□□□ -0.37
PCM1-203ENST00000517545 PEX1O43933 1283 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 CRTAMO95727 393 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 SERPINE1P05121 402 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 COX4I1P13073 169 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 MAGEA3P43357 314 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 BCAR1P56945 870 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 ITGA9Q13797 1035 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 CNGA3Q16281 694 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 CA9Q16790 459 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 DEFB132Q7Z7B7 95 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 UBA3Q8TBC4 463 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 AGR3Q8TD06 166 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 RTP4Q96DX8 246 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 RBM38Q9H0Z9 239 aaKnown RBP12.74□□□□□ -0.37
PCM1-203ENST00000517545 RNF146Q9NTX7 359 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 ASNSD1Q9NWL6 643 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 NDUFA13Q9P0J0 144 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 BTBD7Q9P203 1132 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 COL11A2P13942 1736 aaPredicted RBP12.74□□□□□ -0.37
PCM1-203ENST00000517545 A0A1B0GTW7 788 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 PFDN1O60925 122 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 FBXO21O94952 628 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 F7P08709 466 aaPredicted RBP12.74□□□□□ -0.37
PCM1-203ENST00000517545 KRT19P08727 400 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 MMP10P09238 476 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 ATXN3P54252 364 aaPredicted RBP12.74□□□□□ -0.37
PCM1-203ENST00000517545 MYBPC1Q00872 1141 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 FAM47CQ5HY64 1035 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 CDR2LQ86X02 465 aaPredicted RBP12.74□□□□□ -0.37
PCM1-203ENST00000517545 PCDH19Q8TAB3 1148 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 PPP4R1Q8TF05 950 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 RXFP2Q8WXD0 754 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 SIKE1Q9BRV8 207 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 DNAJC28Q9NX36 388 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 PCDHA11Q9Y5I1 949 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 WDR27A2RRH5 827 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 M0QYV0 167 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 DENRO43583 198 aaKnown RBP12.74□□□□□ -0.37
PCM1-203ENST00000517545 CSDE1O75534 798 aaKnown RBP12.74□□□□□ -0.37
PCM1-203ENST00000517545 MICAL2O94851 1124 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 SUPT20HL2P0C7V6 817 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 PDGFRAP16234 1089 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 MRPS22P82650 360 aaKnown RBP12.74□□□□□ -0.37
PCM1-203ENST00000517545 SUPT20HL1Q3ZLR7 823 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 TIFABQ6ZNK6 161 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 PGBD4Q96DM1 585 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 MCRS1Q96EZ8 462 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 NLRP4Q96MN2 994 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 PRPF18Q99633 342 aaKnown RBP12.74□□□□□ -0.37
PCM1-203ENST00000517545 STN1Q9H668 368 aaKnown RBP12.74□□□□□ -0.37
PCM1-203ENST00000517545 MAP3K20Q9NYL2 800 aaKnown RBP12.74□□□□□ -0.37
PCM1-203ENST00000517545 TMEM216Q9P0N5 145 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 AP4B1Q9Y6B7 739 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 AK5Q9Y6K8 562 aa12.74□□□□□ -0.37
PCM1-203ENST00000517545 SPDYE16A6NNV3 312 aaPredicted RBP12.73□□□□□ -0.37
PCM1-203ENST00000517545 PRPSAP2O60256 369 aa12.73□□□□□ -0.37
PCM1-203ENST00000517545 RAD17O75943 681 aa12.73□□□□□ -0.37
PCM1-203ENST00000517545 ABCD1P33897 745 aa12.73□□□□□ -0.37
PCM1-203ENST00000517545 SERPINB9P50453 376 aa12.73□□□□□ -0.37
PCM1-203ENST00000517545 ZNF143P52747 638 aaPredicted RBP12.73□□□□□ -0.37
PCM1-203ENST00000517545 SH3BGRP55822 239 aaPredicted RBP12.73□□□□□ -0.37
PCM1-203ENST00000517545 SLC9B1Q4ZJI4 515 aa12.73□□□□□ -0.37
PCM1-203ENST00000517545 C6orf52Q5T4I8 152 aa12.73□□□□□ -0.37
PCM1-203ENST00000517545 CASC4Q6P4E1 433 aa12.73□□□□□ -0.37
PCM1-203ENST00000517545 PIP4K2CQ8TBX8 421 aa12.73□□□□□ -0.37
PCM1-203ENST00000517545 SLC7A3Q8WY07 619 aa12.73□□□□□ -0.37
PCM1-203ENST00000517545 ATG4CQ96DT6 458 aa12.73□□□□□ -0.37
PCM1-203ENST00000517545 CLMNQ96JQ2 1002 aa12.73□□□□□ -0.37
PCM1-203ENST00000517545 ZNF668Q96K58 619 aaPredicted RBP12.73□□□□□ -0.37
PCM1-203ENST00000517545 FRMD8Q9BZ67 464 aaPredicted RBP12.73□□□□□ -0.37
PCM1-203ENST00000517545 SENP6Q9GZR1 1112 aaPredicted RBP12.73□□□□□ -0.37
PCM1-203ENST00000517545 XPNPEP3Q9NQH7 507 aa12.73□□□□□ -0.37
PCM1-203ENST00000517545 MOCS1Q9NZB8 636 aa12.73□□□□□ -0.37
PCM1-203ENST00000517545 PSMD13Q9UNM6 376 aa12.73□□□□□ -0.37
PCM1-203ENST00000517545 APOL1O14791 398 aa12.73□□□□□ -0.37
PCM1-203ENST00000517545 AIM2O14862 343 aa12.73□□□□□ -0.37
PCM1-203ENST00000517545 HOXC6P09630 235 aa12.73□□□□□ -0.37
PCM1-203ENST00000517545 SRGAP2CP0DJJ0 459 aa12.73□□□□□ -0.37
PCM1-203ENST00000517545 SRGAP2BP0DMP2 458 aa12.73□□□□□ -0.37
PCM1-203ENST00000517545 CDK4P11802 303 aa12.73□□□□□ -0.37
PCM1-203ENST00000517545 TCF7P36402 384 aaPredicted RBP12.73□□□□□ -0.37
PCM1-203ENST00000517545 MAGEA6P43360 314 aa12.73□□□□□ -0.37
PCM1-203ENST00000517545 CNTN2Q02246 1040 aa12.73□□□□□ -0.37
PCM1-203ENST00000517545 CBLBQ13191 982 aa12.73□□□□□ -0.37
PCM1-203ENST00000517545 PPM1LQ5SGD2 360 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms