RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 GNEQ9Y223 722 aaKnown RBP-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 UTP18Q9Y5J1 556 aaKnown RBP eCLIP-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 RAD54BQ9Y620 910 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 HCFC1P51610 2035 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 IGLV5-37A0A075B6J1 123 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 A0A087X002 238 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 A0A1W2PQH9 124 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 A0A1W2PQM1 296 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 TCRBV7S2A1N4TA0A589 114 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 CBR3O75828 277 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 PRPF6O94906 941 aaKnown RBP-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 CRTAMO95727 393 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 C9P02748 559 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 FDPSP14324 419 aaKnown RBP-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 TYMPP19971 482 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 FASP25445 335 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 TYK2P29597 1187 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 GRIA2P42262 883 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 KIR2DS4P43632 304 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 ZNF136P52737 540 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 LILRA4P59901 499 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 KRTAP12-1P59990 96 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 BNC1Q01954 994 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 MEF2AQ02078 507 aaPredicted RBP-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 MYBPHQ13203 477 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 PFKFB3Q16875 520 aaPredicted RBP-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 MPEG1Q2M385 716 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 STYK1Q6J9G0 422 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 SLC30A10Q6XR72 485 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 NOP9Q86U38 636 aaKnown RBP-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 PRR22Q8IZ63 422 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 CFAP52Q8N1V2 620 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 C7orf31Q8N865 590 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 ZNF540Q8NDQ6 660 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 STON2Q8WXE9 905 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 PHYHIPLQ96FC7 376 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 SERAC1Q96JX3 654 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 TRIB1Q96RU8 372 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 MYL10Q9BUA6 226 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 TM2D2Q9BX73 214 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 PUS3Q9BZE2 481 aaKnown RBP-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 GLOD4Q9HC38 313 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 PTPRHQ9HD43 1115 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 KRT84Q9NSB2 600 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 KLK12Q9UKR0 248 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 EXOGQ9Y2C4 368 aaKnown RBP-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 UBIAD1Q9Y5Z9 338 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 COL15A1P39059 1388 aa-0.83□□□□□ -2.54
SNORA40.16-201ENST00000517238 NACAE9PAV3 2078 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 MYPNQ86TC9 1320 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 IGLV5-52A0A0A0MRZ9 124 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 KIR2DS5A0A0G2JLQ3 304 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 A0A1W2PQU0 124 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 SLC12A8A0AV02 714 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 LILRA5A6NI73 299 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 AP4M1O00189 453 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 VWA5AO00534 786 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 LIASO43766 372 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 ZEB2O60315 1214 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 DLX3O60479 287 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 HAUS5O94927 633 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 AGFG2O95081 481 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 PRB1P04280 392 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 GNAI2P04899 355 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 INHBAP08476 426 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 TRIM49P0CI25 452 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 TRIM49CP0CI26 452 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 GP9P14770 177 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 GNB3P16520 340 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 ITGALP20701 1170 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 PMELP40967 661 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 MTHFRP42898 656 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 PSMD8P48556 350 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 PEX5P50542 639 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 GYS2P54840 703 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 XPCQ01831 940 aaPredicted RBP-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 DLG1Q12959 904 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 MTA1Q13330 715 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 SLC14A1Q13336 389 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 OLIG2Q13516 323 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 PPP2R5EQ16537 467 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 IQCCQ4KMZ1 466 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 SLC35E4Q6ICL7 350 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 PHLDB3Q6NSJ2 640 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 SEM1Q6ZVN7 128 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 NME9Q86XW9 330 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 POM121L12Q8N7R1 296 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 Q8N9L7 120 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 OR2T6Q8NHC8 308 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 PCDH19Q8TAB3 1148 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 TMEM190Q8WZ59 177 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 GLG1Q92896 1179 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 DHX58Q96C10 678 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 ASB16Q96NS5 453 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 SMOQ99835 787 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 HTATIP2Q9BUP3 242 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 DPCDQ9BVM2 203 aaPredicted RBP-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 NUAK2Q9H093 628 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 PATZ1Q9HBE1 687 aaKnown RBP-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 THYN1Q9P016 225 aa-0.84□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms