RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 PTP4A2Q12974 167 aa11.59□□□□□ -0.55
SCARNA20-201ENST00000516768 PPP2R5DQ14738 602 aa11.59□□□□□ -0.55
SCARNA20-201ENST00000516768 CLEC16AQ2KHT3 1053 aa11.59□□□□□ -0.55
SCARNA20-201ENST00000516768 ZC3H12AQ5D1E8 599 aaKnown RBP11.59□□□□□ -0.55
SCARNA20-201ENST00000516768 MPP7Q5T2T1 576 aa11.59□□□□□ -0.55
SCARNA20-201ENST00000516768 EMC10Q5UCC4 262 aa11.59□□□□□ -0.55
SCARNA20-201ENST00000516768 PIK3R6Q5UE93 754 aa11.59□□□□□ -0.55
SCARNA20-201ENST00000516768 ACAD10Q6JQN1 1059 aa11.59□□□□□ -0.55
SCARNA20-201ENST00000516768 PKN3Q6P5Z2 889 aa11.59□□□□□ -0.55
SCARNA20-201ENST00000516768 PHF13Q86YI8 300 aaPredicted RBP11.59□□□□□ -0.55
SCARNA20-201ENST00000516768 SFTPA1Q8IWL2 248 aa11.59□□□□□ -0.55
SCARNA20-201ENST00000516768 KCNV2Q8TDN2 545 aa11.59□□□□□ -0.55
SCARNA20-201ENST00000516768 USP33Q8TEY7 942 aa11.59□□□□□ -0.55
SCARNA20-201ENST00000516768 DDI1Q8WTU0 396 aa11.59□□□□□ -0.55
SCARNA20-201ENST00000516768 SYN2Q92777 582 aaPredicted RBP11.59□□□□□ -0.55
SCARNA20-201ENST00000516768 BHMTQ93088 406 aa11.59□□□□□ -0.55
SCARNA20-201ENST00000516768 IQCDQ96DY2 449 aa11.59□□□□□ -0.55
SCARNA20-201ENST00000516768 PGAP3Q96FM1 320 aaPredicted RBP11.59□□□□□ -0.55
SCARNA20-201ENST00000516768 BTN2A3PQ96KV6 586 aa11.59□□□□□ -0.55
SCARNA20-201ENST00000516768 NPY6RQ99463 290 aa11.59□□□□□ -0.55
SCARNA20-201ENST00000516768 SLC2A11Q9BYW1 496 aa11.59□□□□□ -0.55
SCARNA20-201ENST00000516768 XPO4Q9C0E2 1151 aaKnown RBP11.59□□□□□ -0.55
SCARNA20-201ENST00000516768 NUCKS1Q9H1E3 243 aaKnown RBP11.59□□□□□ -0.55
SCARNA20-201ENST00000516768 HAUS4Q9H6D7 363 aa11.59□□□□□ -0.55
SCARNA20-201ENST00000516768 PRMT8Q9NR22 394 aaPredicted RBP11.59□□□□□ -0.55
SCARNA20-201ENST00000516768 DNAJC17Q9NVM6 304 aaKnown RBP11.59□□□□□ -0.55
SCARNA20-201ENST00000516768 C2orf42Q9NWW7 574 aa11.59□□□□□ -0.55
SCARNA20-201ENST00000516768 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.59□□□□□ -0.55
SCARNA20-201ENST00000516768 SLC12A6Q9UHW9 1150 aa11.59□□□□□ -0.55
SCARNA20-201ENST00000516768 CAPN11Q9UMQ6 739 aa11.59□□□□□ -0.55
SCARNA20-201ENST00000516768 SLC27A6Q9Y2P4 619 aa11.59□□□□□ -0.55
SCARNA20-201ENST00000516768 STARD13Q9Y3M8 1113 aa11.59□□□□□ -0.55
SCARNA20-201ENST00000516768 MIA3Q5JRA6 1907 aa11.58□□□□□ -0.55
SCARNA20-201ENST00000516768 FAM170AA1A519 330 aa11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 K7ESF4 209 aa11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 M0QYT0 321 aa11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 TSPAN3O60637 253 aa11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 DAB1O75553 588 aa11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 TPM3P06753 285 aa11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 CHRM1P11229 460 aaPredicted RBP11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 TDGF1P13385 188 aa11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 SLC6A4P31645 630 aa11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 CCR1P32246 355 aa11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 NSFP46459 744 aaKnown RBP11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 DGKGP49619 791 aa11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 NRLP54845 237 aa11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 ZBED6P86452 979 aa11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 SATB1Q01826 763 aa11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 SLC25A52Q3SY17 297 aa11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 C2orf27AQ580R0 203 aa11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 FAM133BQ5BKY9 247 aaKnown RBP11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 FAM102AQ5T9C2 384 aaPredicted RBP11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 NADSYN1Q6IA69 706 aa11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 GRAMD4Q6IC98 578 aa11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 RFWD3Q6PCD5 774 aa11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 TSSK4Q6SA08 328 aa11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 MMS22LQ6ZRQ5 1243 aa11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 SYT13Q7L8C5 426 aa11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 TERB1Q8NA31 727 aa11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 RNF214Q8ND24 703 aa11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 RPLP0P6Q8NHW5 317 aa11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 OLIG1Q8TAK6 271 aa11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 CPLX3Q8WVH0 158 aa11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 VCPIP1Q96JH7 1222 aa11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 DDX50Q9BQ39 737 aaKnown RBP11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 FAM126AQ9BYI3 521 aaPredicted RBP11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 DDIT4Q9NX09 232 aa11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 ADAM22Q9P0K1 906 aa11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 CALCOCO1Q9P1Z2 691 aa11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 CLEC4EQ9ULY5 219 aa11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 LUC7L2Q9Y383 392 aaKnown RBP11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 ATG2BQ96BY7 2078 aa11.58□□□□□ -0.56
SCARNA20-201ENST00000516768 PRRT4C9JH25 899 aa11.57□□□□□ -0.56
SCARNA20-201ENST00000516768 PROB1E7EW31 1015 aa11.57□□□□□ -0.56
SCARNA20-201ENST00000516768 GOLGA8SH3BPF8 625 aa11.57□□□□□ -0.56
SCARNA20-201ENST00000516768 CBFA2T2O43439 604 aa11.57□□□□□ -0.56
SCARNA20-201ENST00000516768 TIMM44O43615 452 aa11.57□□□□□ -0.56
SCARNA20-201ENST00000516768 ENDOD1O94919 500 aa11.57□□□□□ -0.56
SCARNA20-201ENST00000516768 APOEP02649 317 aa11.57□□□□□ -0.56
SCARNA20-201ENST00000516768 CALB1P05937 261 aa11.57□□□□□ -0.56
SCARNA20-201ENST00000516768 GZMAP12544 262 aa11.57□□□□□ -0.56
SCARNA20-201ENST00000516768 SKILP12757 684 aa11.57□□□□□ -0.56
SCARNA20-201ENST00000516768 TFE3P19532 575 aaPredicted RBP11.57□□□□□ -0.56
SCARNA20-201ENST00000516768 ABCB4P21439 1286 aa11.57□□□□□ -0.56
SCARNA20-201ENST00000516768 HOXD9P28356 352 aaPredicted RBP11.57□□□□□ -0.56
SCARNA20-201ENST00000516768 FLT3P36888 993 aa11.57□□□□□ -0.56
SCARNA20-201ENST00000516768 NBL1P41271 181 aa11.57□□□□□ -0.56
SCARNA20-201ENST00000516768 CXCR3P49682 368 aa11.57□□□□□ -0.56
SCARNA20-201ENST00000516768 SEC13P55735 322 aa11.57□□□□□ -0.56
SCARNA20-201ENST00000516768 GSCP56915 257 aaPredicted RBP11.57□□□□□ -0.56
SCARNA20-201ENST00000516768 KDSRQ06136 332 aa11.57□□□□□ -0.56
SCARNA20-201ENST00000516768 C1QBPQ07021 282 aaKnown RBP11.57□□□□□ -0.56
SCARNA20-201ENST00000516768 KLHL30Q0D2K2 578 aa11.57□□□□□ -0.56
SCARNA20-201ENST00000516768 NME3Q13232 169 aa11.57□□□□□ -0.56
SCARNA20-201ENST00000516768 MTA1Q13330 715 aa11.57□□□□□ -0.56
SCARNA20-201ENST00000516768 ASIC2Q16515 512 aa11.57□□□□□ -0.56
SCARNA20-201ENST00000516768 HSF5Q4G112 596 aaPredicted RBP11.57□□□□□ -0.56
SCARNA20-201ENST00000516768 E4F1Q66K89 784 aaPredicted RBP11.57□□□□□ -0.56
SCARNA20-201ENST00000516768 RNF43Q68DV7 783 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms