RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 PCDHB3Q9Y5E6 796 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 PCDHGB5Q9Y5G0 923 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 SLC4A4Q9Y6R1 1079 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 FAT4Q6V0I7 4981 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 CKAP5Q14008 2032 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 MYH7P12883 1935 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 FER1L5A0AVI2 2057 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 ZNF638Q14966 1978 aaKnown RBP3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 A0A1W2PPC4 97 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 EME2A4GXA9 379 aaPredicted RBP3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 A6NL46 340 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 A8MV72 311 aaPredicted RBP3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 C3orf84H3BNL1 204 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 INPP4BO15327 924 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 GPAA1O43292 621 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 PRDM1O75626 825 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 STAM2O75886 525 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 FGF19O95750 216 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 SEMA4FO95754 770 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 ERBB2P04626 1255 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 IGHV4-34P06331 123 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 TPOP07202 933 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 KCNA2P16389 499 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 CCKBRP32239 447 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 EIF2DP41214 584 aaKnown RBP3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 STAT5BP51692 787 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 KCNK10P57789 538 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 ELAVL2Q12926 359 aaKnown RBP3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 CCDC178Q5BJE1 867 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 C10orf76Q5T2E6 689 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 L1TD1Q5T7N2 865 aaKnown RBP3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 ATF7IP2Q5U623 682 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 CPZQ66K79 652 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 MEPCEQ7L2J0 689 aaKnown RBP3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 TMTC1Q8IUR5 882 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 SMAP1Q8IYB5 467 aaPredicted RBP3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 IFNL3Q8IZI9 196 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 PHTF2Q8N3S3 785 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 TTC9BQ8N6N2 239 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 MAB21L3Q8N8X9 362 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 DNAAF3Q8N9W5 541 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 ATP11CQ8NB49 1132 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 GSTCDQ8NEC7 633 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 NUP43Q8NFH3 380 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 INPP5DQ92835 1189 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 RILPL2Q969X0 211 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 TMEM125Q96AQ2 219 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 P2RY11Q96G91 374 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 PPP1R13BQ96KQ4 1090 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 ZFP42Q96MM3 310 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 PWWP2AQ96N64 755 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 TMEM74Q96NL1 305 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 SCLT1Q96NL6 688 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 CCDC3Q9BQI4 270 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 PANK2Q9BZ23 570 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 RNF41Q9H4P4 317 aaPredicted RBP3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 EBF2Q9HAK2 575 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 UBN1Q9NPG3 1134 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 DIAPH3Q9NSV4 1193 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 TRPM5Q9NZQ8 1165 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 IL17CQ9P0M4 197 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 AKT3Q9Y243 479 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 B3GNT3Q9Y2A9 372 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 MRPL11Q9Y3B7 192 aaKnown RBP3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 ASB3Q9Y575 518 aa3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 HRNRQ86YZ3 2850 aaPredicted RBP3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 INTS1Q8N201 2190 aaKnown RBP3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 TDRD6O60522 2096 aaKnown RBP3.42□□□□□ -1.86
SCARNA13-201ENST00000516672 TCHHQ07283 1943 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 A0A0U1RQS6 177 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 DRGXA6NNA5 263 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 WASH3PC4AMC7 463 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 D6RAR5 112 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 K7ESM1 405 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 MUSKO15146 869 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 SGSM2O43147 1006 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 RRP9O43818 475 aaKnown RBP3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 CD5LO43866 347 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 ORC4O43929 436 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 MARCH6O60337 910 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 RNASEH1O60930 286 aaKnown RBP3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 FGAP02671 866 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 CYP17A1P05093 508 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 TSPY3P0CV98 308 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 TSPY8P0CW00 308 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 RBMY1A1P0DJD3 496 aaKnown RBP3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 ITGA4P13612 1032 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 GSPT1P15170 499 aaKnown RBP3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 MX2P20592 715 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 TKTP29401 623 aaKnown RBP3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 CA7P43166 264 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 TRAPPC10P48553 1259 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 NOVP48745 357 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 TDO2P48775 406 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 EPHB3P54753 998 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 ACTG1P63261 375 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 MMRN1Q13201 1228 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 NMIQ13287 307 aaPredicted RBP3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 ZNF77Q15935 545 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 TSGA10IPQ3SY00 556 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms