RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 SGSM2O43147 1006 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 DYNC1LI2O43237 492 aaPredicted RBP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ARHGEF9O43307 516 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 DCXO43602 365 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ZNF861PO60384 105 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 NRP2O60462 931 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SORBS3O60504 671 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TSPAN3O60637 253 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CLN5O75503 358 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ZNF821O75541 412 aaPredicted RBP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ITGA10O75578 1167 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RHBDL1O75783 438 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PRKD3O94806 890 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CNOT4O95628 575 aaKnown RBP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ESRRBO95718 433 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SEMA4FO95754 770 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 C6orf47O95873 294 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TGM6O95932 706 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 GBAP04062 536 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PRM2P04554 102 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 NTRK1P04629 796 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CENPBP07199 599 aaPredicted RBP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ADH1AP07327 375 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SNRPB2P08579 225 aaKnown RBP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ADRA2AP08913 450 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 DBHP09172 617 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 USP17L7P0C7H9 530 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ZSCAN5DPP0CG00 497 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SPDYE6P0CI01 402 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 P0DMU3 169 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 FAM231AP0DMU4 169 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 FAM231CP0DMU5 169 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CYP2D6P10635 497 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ESDP10768 282 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PSG2P11465 335 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 NR2C1P13056 603 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 GP9P14770 177 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 GJA1P17302 382 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PFKLP17858 780 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ADRA2CP18825 462 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 EPORP19235 508 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ITGAXP20702 1163 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PAX7P23759 505 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CERS1P27544 350 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TPP2P29144 1249 aaPredicted RBP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CDC25BP30305 580 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 HOXC9P31274 260 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CHRNA3P32297 505 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CSTF2P33240 577 aaKnown RBP eCLIP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 FLT3P36888 993 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CDKN1AP38936 164 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MC3RP41968 323 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 BTDP43251 543 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 AVPR1BP47901 424 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 KCNJ5P48544 419 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 GIPRP48546 466 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 EVX1P49640 407 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PGFP49763 221 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RARRES1P49788 294 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SCNN1BP51168 640 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ZNF80P51504 273 aaPredicted RBP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 NKX2-5P52952 324 aaPredicted RBP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 OXCT1P55809 520 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CACNG7P62955 275 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ZBED6P86452 979 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RBM10P98175 930 aaKnown RBP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ZNF200P98182 395 aaPredicted RBP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 POU3F1Q03052 451 aaPredicted RBP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RELQ04864 619 aaPredicted RBP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 FAM160A1Q05DH4 1040 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PAX8Q06710 450 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 GALNT2Q10471 571 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SRSF9Q13242 221 aaKnown RBP eCLIP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 GRB10Q13322 594 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CRHR2Q13324 411 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SF3B2Q13435 895 aaKnown RBP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TRIM14Q14142 442 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 DPYSL3Q14195 570 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 DHX8Q14562 1220 aaKnown RBP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ZNF273Q14593 569 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 BMS1Q14692 1282 aaKnown RBP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SPCS2Q15005 226 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RBBP5Q15291 538 aaKnown RBP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 GUSBP1Q15486 140 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 DLG2Q15700 870 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CD226Q15762 336 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ZIC1Q15915 447 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CDKN3Q16667 212 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MAN2A1Q16706 1144 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 LRRC36Q1X8D7 754 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 DEFB109BQ30KR1 87 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 INAVAQ3KP66 663 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SPDYE2Q495Y8 402 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 GLIPR1L2Q4G1C9 344 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 NOM1Q5C9Z4 860 aaKnown RBP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ARSJQ5FYB0 599 aaPredicted RBP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 XKR7Q5GH72 579 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 INTS6LQ5JSJ4 861 aaKnown RBP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SLC27A3Q5K4L6 730 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PRAMEF19Q5SWL8 479 aa-0.68□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms