RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 DMDP11532 3685 aa13.29□□□□□ -0.28
CLCN3-210ENST00000515420 PLXND1Q9Y4D7 1925 aa13.29□□□□□ -0.28
CLCN3-210ENST00000515420 PTPRZ1P23471 2315 aaPredicted RBP13.29□□□□□ -0.28
CLCN3-210ENST00000515420 SYCE3A1L190 88 aa13.29□□□□□ -0.28
CLCN3-210ENST00000515420 EPHB6O15197 1021 aa13.29□□□□□ -0.28
CLCN3-210ENST00000515420 ACSL4O60488 711 aa13.29□□□□□ -0.28
CLCN3-210ENST00000515420 DAB1O75553 588 aa13.29□□□□□ -0.28
CLCN3-210ENST00000515420 KLF8O95600 359 aaPredicted RBP13.29□□□□□ -0.28
CLCN3-210ENST00000515420 TRUB2O95900 331 aaKnown RBP13.29□□□□□ -0.28
CLCN3-210ENST00000515420 ERBB2P04626 1255 aa13.29□□□□□ -0.28
CLCN3-210ENST00000515420 SLC2A3P11169 496 aa13.29□□□□□ -0.28
CLCN3-210ENST00000515420 HNRNPLP14866 589 aaKnown RBP eCLIP13.29□□□□□ -0.28
CLCN3-210ENST00000515420 HOXD9P28356 352 aaPredicted RBP13.29□□□□□ -0.28
CLCN3-210ENST00000515420 TIE1P35590 1138 aa13.29□□□□□ -0.28
CLCN3-210ENST00000515420 CDK17Q00537 523 aa13.29□□□□□ -0.28
CLCN3-210ENST00000515420 CDR2Q01850 454 aa13.29□□□□□ -0.28
CLCN3-210ENST00000515420 SLC6A3Q01959 620 aa13.29□□□□□ -0.28
CLCN3-210ENST00000515420 IQCB1Q15051 598 aa13.29□□□□□ -0.28
CLCN3-210ENST00000515420 EIF4HQ15056 248 aaKnown RBP13.29□□□□□ -0.28
CLCN3-210ENST00000515420 TRIM72Q6ZMU5 477 aa13.29□□□□□ -0.28
CLCN3-210ENST00000515420 FAM183BPQ6ZVS7 135 aa13.29□□□□□ -0.28
CLCN3-210ENST00000515420 NOP9Q86U38 636 aaKnown RBP13.29□□□□□ -0.28
CLCN3-210ENST00000515420 TAC4Q86UU9 113 aa13.29□□□□□ -0.28
CLCN3-210ENST00000515420 RASSF3Q86WH2 238 aa13.29□□□□□ -0.28
CLCN3-210ENST00000515420 SFTPA1Q8IWL2 248 aa13.29□□□□□ -0.28
CLCN3-210ENST00000515420 ALLCQ8N6M5 410 aa13.29□□□□□ -0.28
CLCN3-210ENST00000515420 TXNDC5Q8NBS9 432 aaKnown RBP13.29□□□□□ -0.28
CLCN3-210ENST00000515420 TSTD1Q8NFU3 115 aa13.29□□□□□ -0.28
CLCN3-210ENST00000515420 DDI1Q8WTU0 396 aa13.29□□□□□ -0.28
CLCN3-210ENST00000515420 RUBCNQ92622 972 aa13.29□□□□□ -0.28
CLCN3-210ENST00000515420 TMA16Q96EY4 203 aaKnown RBP13.29□□□□□ -0.28
CLCN3-210ENST00000515420 PIWIL1Q96J94 861 aaKnown RBP13.29□□□□□ -0.28
CLCN3-210ENST00000515420 POLMQ9NP87 494 aaPredicted RBP13.29□□□□□ -0.28
CLCN3-210ENST00000515420 NLRC4Q9NPP4 1024 aa13.29□□□□□ -0.28
CLCN3-210ENST00000515420 RTN4Q9NQC3 1192 aaKnown RBP13.29□□□□□ -0.28
CLCN3-210ENST00000515420 PLK2Q9NYY3 685 aa13.29□□□□□ -0.28
CLCN3-210ENST00000515420 RAB23Q9ULC3 237 aa13.29□□□□□ -0.28
CLCN3-210ENST00000515420 MYO6Q9UM54 1294 aa13.29□□□□□ -0.28
CLCN3-210ENST00000515420 GVINP1Q7Z2Y8 2422 aa13.28□□□□□ -0.28
CLCN3-210ENST00000515420 PRRT4C9JH25 899 aa13.28□□□□□ -0.28
CLCN3-210ENST00000515420 TRIM24O15164 1050 aa13.28□□□□□ -0.28
CLCN3-210ENST00000515420 AXIN1O15169 862 aa13.28□□□□□ -0.28
CLCN3-210ENST00000515420 ALDH1A2O94788 518 aa13.28□□□□□ -0.28
CLCN3-210ENST00000515420 GFPT2O94808 682 aa13.28□□□□□ -0.28
CLCN3-210ENST00000515420 APOEP02649 317 aa13.28□□□□□ -0.28
CLCN3-210ENST00000515420 CCDC172P0C7W6 258 aa13.28□□□□□ -0.28
CLCN3-210ENST00000515420 NTSR1P30989 418 aa13.28□□□□□ -0.28
CLCN3-210ENST00000515420 GBP1P32455 592 aa13.28□□□□□ -0.28
CLCN3-210ENST00000515420 NOMO3P69849 1222 aa13.28□□□□□ -0.28
CLCN3-210ENST00000515420 DMWDQ09019 674 aa13.28□□□□□ -0.28
CLCN3-210ENST00000515420 FILIP1LQ4L180 1135 aa13.28□□□□□ -0.28
CLCN3-210ENST00000515420 DCAF6Q58WW2 860 aa13.28□□□□□ -0.28
CLCN3-210ENST00000515420 FAM133BQ5BKY9 247 aaKnown RBP13.28□□□□□ -0.28
CLCN3-210ENST00000515420 EMC10Q5UCC4 262 aa13.28□□□□□ -0.28
CLCN3-210ENST00000515420 PIK3R6Q5UE93 754 aa13.28□□□□□ -0.28
CLCN3-210ENST00000515420 HEATR6Q6AI08 1181 aaKnown RBP13.28□□□□□ -0.28
CLCN3-210ENST00000515420 LAIR1Q6GTX8 287 aa13.28□□□□□ -0.28
CLCN3-210ENST00000515420 OR6B2Q6IFH4 312 aa13.28□□□□□ -0.28
CLCN3-210ENST00000515420 ARCQ7LC44 396 aa13.28□□□□□ -0.28
CLCN3-210ENST00000515420 ANKS1BQ7Z6G8 1248 aa13.28□□□□□ -0.28
CLCN3-210ENST00000515420 ERICH1Q86X53 443 aa13.28□□□□□ -0.28
CLCN3-210ENST00000515420 CCDC33Q8N5R6 958 aa13.28□□□□□ -0.28
CLCN3-210ENST00000515420 GAB3Q8WWW8 586 aa13.28□□□□□ -0.28
CLCN3-210ENST00000515420 BHMTQ93088 406 aa13.28□□□□□ -0.28
CLCN3-210ENST00000515420 C18orf8Q96DM3 657 aa13.28□□□□□ -0.28
CLCN3-210ENST00000515420 P2RY11Q96G91 374 aa13.28□□□□□ -0.28
CLCN3-210ENST00000515420 BTN2A3PQ96KV6 586 aa13.28□□□□□ -0.28
CLCN3-210ENST00000515420 PCMTD1Q96MG8 357 aaPredicted RBP13.28□□□□□ -0.28
CLCN3-210ENST00000515420 HHIPQ96QV1 700 aa13.28□□□□□ -0.28
CLCN3-210ENST00000515420 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.28□□□□□ -0.28
CLCN3-210ENST00000515420 FRYLO94915 3013 aa13.28□□□□□ -0.28
CLCN3-210ENST00000515420 EP300Q09472 2414 aaPredicted RBP13.28□□□□□ -0.28
CLCN3-210ENST00000515420 GPR179Q6PRD1 2367 aa13.27□□□□□ -0.29
CLCN3-210ENST00000515420 A0A1B0GTH6 734 aa13.27□□□□□ -0.29
CLCN3-210ENST00000515420 A0A1W2PQC6 194 aa13.27□□□□□ -0.29
CLCN3-210ENST00000515420 TYW5A2RUC4 315 aaKnown RBP13.27□□□□□ -0.29
CLCN3-210ENST00000515420 SGK1O00141 431 aa13.27□□□□□ -0.29
CLCN3-210ENST00000515420 HRO43593 1189 aa13.27□□□□□ -0.29
CLCN3-210ENST00000515420 TIMM44O43615 452 aa13.27□□□□□ -0.29
CLCN3-210ENST00000515420 ADAM23O75077 832 aa13.27□□□□□ -0.29
CLCN3-210ENST00000515420 CYP1A1P04798 512 aaPredicted RBP13.27□□□□□ -0.29
CLCN3-210ENST00000515420 MMEP08473 750 aa13.27□□□□□ -0.29
CLCN3-210ENST00000515420 NOS2P35228 1153 aa13.27□□□□□ -0.29
CLCN3-210ENST00000515420 MATKP42679 507 aa13.27□□□□□ -0.29
CLCN3-210ENST00000515420 TPM4P67936 248 aa13.27□□□□□ -0.29
CLCN3-210ENST00000515420 SIM2Q14190 667 aaPredicted RBP13.27□□□□□ -0.29
CLCN3-210ENST00000515420 TAF5Q15542 800 aa13.27□□□□□ -0.29
CLCN3-210ENST00000515420 TAF3Q5VWG9 929 aa13.27□□□□□ -0.29
CLCN3-210ENST00000515420 C11orf74Q86VG3 221 aa13.27□□□□□ -0.29
CLCN3-210ENST00000515420 XYLT1Q86Y38 959 aa13.27□□□□□ -0.29
CLCN3-210ENST00000515420 DEFB106AQ8N104 65 aa13.27□□□□□ -0.29
CLCN3-210ENST00000515420 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.27□□□□□ -0.29
CLCN3-210ENST00000515420 ATP6V0D2Q8N8Y2 350 aa13.27□□□□□ -0.29
CLCN3-210ENST00000515420 HJURPQ8NCD3 748 aaPredicted RBP13.27□□□□□ -0.29
CLCN3-210ENST00000515420 WFIKKN2Q8TEU8 576 aa13.27□□□□□ -0.29
CLCN3-210ENST00000515420 UCMAQ8WVF2 138 aa13.27□□□□□ -0.29
CLCN3-210ENST00000515420 GABRG3Q99928 467 aa13.27□□□□□ -0.29
CLCN3-210ENST00000515420 SLC12A6Q9UHW9 1150 aa13.27□□□□□ -0.29
CLCN3-210ENST00000515420 GMEB2Q9UKD1 530 aa13.27□□□□□ -0.29
CLCN3-210ENST00000515420 HCN2Q9UL51 889 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms