RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 VCPIP1Q96JH7 1222 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 FAM83CQ9BQN1 747 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 NUP85Q9BW27 656 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 OSGEPQ9NPF4 335 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 PARVAQ9NVD7 372 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 THG1LQ9NWX6 298 aaKnown RBP10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 STAP1Q9ULZ2 295 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 TLR6Q9Y2C9 796 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 MYOFQ9NZM1 2061 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 MIA3Q5JRA6 1907 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 E2F8A0AVK6 867 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 KRBA1A5PL33 1030 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 ANKRD62A6NC57 917 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 RCCD1A6NED2 376 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 TMEM110-MUSTN1A8MSY1 372 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 DCXO43602 365 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 NDUFA10O95299 355 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 PDGFBP01127 241 aaPredicted RBP10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 APOEP02649 317 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 CYP1A2P05177 515 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 TMEM253P0C7T8 217 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 MYBL1P10243 752 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 CD72P21854 359 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 PSMA2P25787 234 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 SLC6A4P31645 630 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 RDXP35241 583 aaKnown RBP10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 MAGEA1P43355 309 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 HARS2P49590 506 aaKnown RBP10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 HDAC4P56524 1084 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 GSDMDP57764 484 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 ZXDAP98168 799 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 EIF4EBP2Q13542 120 aaPredicted RBP10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 RUNX3Q13761 415 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 DHCR24Q15392 516 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 SLC25A52Q3SY17 297 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 LY6G5CQ5SRR4 150 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 RAP1GAP2Q684P5 730 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 RFWD3Q6PCD5 774 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 TPRG1Q6ZUI0 275 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 HTR3DQ70Z44 454 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 C12orf40Q86WS4 652 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 TMTC1Q8IUR5 882 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 SIX5Q8N196 739 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 CCDC185Q8N715 623 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 EFCAB3Q8N7B9 438 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 ZNF564Q8TBZ8 553 aaPredicted RBP10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 CSGALNACT1Q8TDX6 532 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 CTNNBL1Q8WYA6 563 aaPredicted RBP10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 IRF7Q92985 503 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 CHFRQ96EP1 664 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 PRICKLE1Q96MT3 831 aaPredicted RBP10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 MAGEB5Q9BZ81 275 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 ECT2Q9H8V3 914 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 SLC2A4RGQ9NR83 387 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 PLK2Q9NYY3 685 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 CTTNBP2NLQ9P2B4 639 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 ANAPC7Q9UJX3 599 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 FBXL21Q9UKT6 434 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 EPN1Q9Y6I3 576 aaPredicted RBP10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 SCINQ9Y6U3 715 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 PIAS3Q9Y6X2 628 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 KIAA1549LQ6ZVL6 1849 aa10.18□□□□□ -0.78
TOPBP1-209ENST00000513818 FAM86C2PA6NEL3 165 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 TMEM191CA6NGB0 347 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 EIF3CLB5ME19 914 aaKnown RBP10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 NEDD8-MDP1E9PL57 170 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 ACSL4O60488 711 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 NFATC1O95644 943 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 TCF4P15884 667 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 GBP1P32455 592 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 PTPN9P43378 593 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 NUMBP49757 651 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 IRAK1P51617 712 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 KPNA1P52294 538 aaPredicted RBP10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 ZNF143P52747 638 aaPredicted RBP10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 CCZ1BP86790 482 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 CCZ1P86791 482 aaPredicted RBP10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 NNTQ13423 1086 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 PDGFRLQ15198 375 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 SPA17Q15506 151 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 MLF2Q15773 248 aaPredicted RBP10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 GAB4Q2WGN9 574 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 ANO4Q32M45 955 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 ITPRIPL2Q3MIP1 535 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 FAM133BQ5BKY9 247 aaKnown RBP10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 PIK3R6Q5UE93 754 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 NUGGCQ68CJ6 796 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 SCYL2Q6P3W7 929 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 TXNDC11Q6PKC3 985 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 BNIPLQ7Z465 357 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 CHSY1Q86X52 802 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 CIR1Q86X95 450 aaPredicted RBP10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 TMEM25Q86YD3 366 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 CCDC170Q8IYT3 715 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 CPA6Q8N4T0 437 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 NAT16Q8N8M0 369 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 ATP2A3Q93084 1043 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 NT5C3BQ969T7 300 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 ZNF830Q96NB3 372 aaPredicted RBP10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 EIF3CQ99613 913 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms